Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 TMEM8B-202ENST00000377991 14112 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
RSPO4Q2I0M5 CLCC1-204ENST00000369968 4151 ntTSL 5 BASIC5.36□□□□□ -1.55
RSPO4Q2I0M5 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
RSPO4Q2I0M5 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
RSPO4Q2I0M5 AC005183.1-201ENST00000603687 1979 ntBASIC5.36□□□□□ -1.55
RSPO4Q2I0M5 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC5.36□□□□□ -1.55
RSPO4Q2I0M5 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
RSPO4Q2I0M5 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
RSPO4Q2I0M5 AC022164.1-201ENST00000568767 2673 ntBASIC5.36□□□□□ -1.55
RSPO4Q2I0M5 LIN7C-201ENST00000278193 4688 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
RSPO4Q2I0M5 MBNL1-204ENST00000324210 5465 ntAPPRIS ALT1 TSL 1 (best) BASIC5.36□□□□□ -1.55
RSPO4Q2I0M5 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
RSPO4Q2I0M5 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
RSPO4Q2I0M5 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
RSPO4Q2I0M5 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
RSPO4Q2I0M5 MFSD8-201ENST00000296468 4516 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
RSPO4Q2I0M5 HEPH-206ENST00000441993 4310 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
RSPO4Q2I0M5 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC5.35□□□□□ -1.55
RSPO4Q2I0M5 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
RSPO4Q2I0M5 ZNF227-201ENST00000313040 3043 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
RSPO4Q2I0M5 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC5.35□□□□□ -1.55
RSPO4Q2I0M5 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
RSPO4Q2I0M5 KCNA2-209ENST00000639048 10836 ntTSL 5 BASIC5.35□□□□□ -1.55
RSPO4Q2I0M5 LINC00630-201ENST00000416381 2012 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
RSPO4Q2I0M5 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
RSPO4Q2I0M5 ZNF285B-201ENST00000561698 1767 ntBASIC5.35□□□□□ -1.55
RSPO4Q2I0M5 CHCHD7-203ENST00000396723 1550 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
RSPO4Q2I0M5 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC5.35□□□□□ -1.55
RSPO4Q2I0M5 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC5.35□□□□□ -1.55
RSPO4Q2I0M5 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
RSPO4Q2I0M5 GNAS-202ENST00000306090 477 ntTSL 5 BASIC5.35□□□□□ -1.55
RSPO4Q2I0M5 AC079741.1-201ENST00000321498 212 ntBASIC5.35□□□□□ -1.55
RSPO4Q2I0M5 RNA5SP388-201ENST00000362584 119 ntBASIC5.35□□□□□ -1.55
RSPO4Q2I0M5 Y_RNA.54-201ENST00000362766 105 ntBASIC5.35□□□□□ -1.55
RSPO4Q2I0M5 SNORA62.2-201ENST00000364672 152 ntBASIC5.35□□□□□ -1.55
RSPO4Q2I0M5 RNU6-641P-201ENST00000384006 107 ntBASIC5.35□□□□□ -1.55
RSPO4Q2I0M5 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
RSPO4Q2I0M5 MRPL35P1-201ENST00000404272 572 ntBASIC5.35□□□□□ -1.55
RSPO4Q2I0M5 RNU2-33P-201ENST00000410344 192 ntBASIC5.35□□□□□ -1.55
RSPO4Q2I0M5 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC5.35□□□□□ -1.55
RSPO4Q2I0M5 AC017078.1-201ENST00000416146 368 ntBASIC5.35□□□□□ -1.55
RSPO4Q2I0M5 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC5.35□□□□□ -1.55
RSPO4Q2I0M5 OR2AM1P-201ENST00000422137 422 ntBASIC5.35□□□□□ -1.55
RSPO4Q2I0M5 AL590632.1-201ENST00000424289 371 ntBASIC5.35□□□□□ -1.55
RSPO4Q2I0M5 RPS24P8-201ENST00000431490 402 ntBASIC5.35□□□□□ -1.55
RSPO4Q2I0M5 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC5.35□□□□□ -1.55
RSPO4Q2I0M5 RPL36AP15-201ENST00000444514 266 ntBASIC5.35□□□□□ -1.55
RSPO4Q2I0M5 RPL10P17-201ENST00000453852 316 ntBASIC5.35□□□□□ -1.55
RSPO4Q2I0M5 AC079804.1-201ENST00000461922 436 ntBASIC5.35□□□□□ -1.55
RSPO4Q2I0M5 AC055855.1-201ENST00000489563 579 ntBASIC5.35□□□□□ -1.55
RSPO4Q2I0M5 AC074198.2-201ENST00000508153 258 ntBASIC5.35□□□□□ -1.55
RSPO4Q2I0M5 AC105384.2-201ENST00000508433 640 ntBASIC5.35□□□□□ -1.55
RSPO4Q2I0M5 AC026402.1-201ENST00000513642 170 ntBASIC5.35□□□□□ -1.55
RSPO4Q2I0M5 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC5.35□□□□□ -1.55
RSPO4Q2I0M5 MAL2-201ENST00000522112 573 ntTSL 4 BASIC5.35□□□□□ -1.55
RSPO4Q2I0M5 AC008033.2-201ENST00000542626 177 ntBASIC5.35□□□□□ -1.55
RSPO4Q2I0M5 AC007494.1-201ENST00000562293 760 ntBASIC5.35□□□□□ -1.55
RSPO4Q2I0M5 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC5.35□□□□□ -1.55
RSPO4Q2I0M5 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC5.35□□□□□ -1.55
RSPO4Q2I0M5 AC020910.3-201ENST00000603701 874 ntBASIC5.35□□□□□ -1.55
RSPO4Q2I0M5 BX284668.6-201ENST00000606899 438 ntBASIC5.35□□□□□ -1.55
RSPO4Q2I0M5 U6.114-201ENST00000636407 96 ntBASIC5.35□□□□□ -1.55
RSPO4Q2I0M5 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC5.35□□□□□ -1.55
RSPO4Q2I0M5 USP8-204ENST00000425032 3559 ntTSL 2 BASIC5.35□□□□□ -1.55
RSPO4Q2I0M5 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
RSPO4Q2I0M5 AC232271.1-201ENST00000602455 2715 ntBASIC5.35□□□□□ -1.55
RSPO4Q2I0M5 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
RSPO4Q2I0M5 ZRANB3-211ENST00000619650 2494 ntTSL 5 BASIC5.35□□□□□ -1.55
RSPO4Q2I0M5 AP004607.3-201ENST00000530354 3915 ntBASIC5.35□□□□□ -1.55
RSPO4Q2I0M5 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
RSPO4Q2I0M5 ATF7IP2-204ENST00000396560 3665 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
RSPO4Q2I0M5 AC008669.1-201ENST00000565823 2178 ntBASIC5.35□□□□□ -1.55
RSPO4Q2I0M5 AC068389.1-202ENST00000526470 3564 ntTSL 2 BASIC5.35□□□□□ -1.55
RSPO4Q2I0M5 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC5.35□□□□□ -1.55
RSPO4Q2I0M5 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC5.35□□□□□ -1.55
RSPO4Q2I0M5 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
RSPO4Q2I0M5 AC003973.3-201ENST00000624863 2822 ntBASIC5.34□□□□□ -1.55
RSPO4Q2I0M5 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC5.34□□□□□ -1.55
RSPO4Q2I0M5 UNC79-203ENST00000553484 9100 ntTSL 5 BASIC5.34□□□□□ -1.55
RSPO4Q2I0M5 KLHL13-202ENST00000371876 5331 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
RSPO4Q2I0M5 SPAG6-209ENST00000538630 2376 ntTSL 5 BASIC5.34□□□□□ -1.55
RSPO4Q2I0M5 DHX40P1-201ENST00000588725 1412 ntBASIC5.34□□□□□ -1.55
RSPO4Q2I0M5 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC5.34□□□□□ -1.55
RSPO4Q2I0M5 TCEANC2-201ENST00000234827 10436 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
RSPO4Q2I0M5 OLFM3-201ENST00000338858 2189 ntAPPRIS ALT1 TSL 1 (best) BASIC5.34□□□□□ -1.55
RSPO4Q2I0M5 IRF5P1-201ENST00000504852 2164 ntBASIC5.34□□□□□ -1.55
RSPO4Q2I0M5 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
RSPO4Q2I0M5 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
RSPO4Q2I0M5 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC5.34□□□□□ -1.55
RSPO4Q2I0M5 AL136131.1-201ENST00000406079 803 ntBASIC5.34□□□□□ -1.55
RSPO4Q2I0M5 RNU6-1203P-201ENST00000410703 110 ntBASIC5.34□□□□□ -1.55
RSPO4Q2I0M5 RPL21P38-201ENST00000418090 167 ntBASIC5.34□□□□□ -1.55
RSPO4Q2I0M5 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
RSPO4Q2I0M5 AL590399.4-201ENST00000436561 601 ntBASIC5.34□□□□□ -1.55
RSPO4Q2I0M5 RPL23AP43-201ENST00000446445 471 ntBASIC5.34□□□□□ -1.55
RSPO4Q2I0M5 RPL29P29-201ENST00000448725 423 ntBASIC5.34□□□□□ -1.55
RSPO4Q2I0M5 AL136097.1-201ENST00000456945 913 ntBASIC5.34□□□□□ -1.55
RSPO4Q2I0M5 RPS23P2-201ENST00000463671 415 ntBASIC5.34□□□□□ -1.55
RSPO4Q2I0M5 RPL21P71-201ENST00000465598 459 ntBASIC5.34□□□□□ -1.55
RSPO4Q2I0M5 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC5.34□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 112.1 ms