Protein–RNA interactions for Protein: Q12766

HMGXB3, HMG domain-containing protein 3, humanhuman

Predictions only

Length 1,538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3Q12766 AL118520.1-201ENST00000450770 291 ntBASIC3.73□□□□□ -1.81
HMGXB3Q12766 SNORD13-201ENST00000459299 104 ntBASIC3.73□□□□□ -1.81
HMGXB3Q12766 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC3.73□□□□□ -1.81
HMGXB3Q12766 AC110588.1-201ENST00000559699 137 ntBASIC3.73□□□□□ -1.81
HMGXB3Q12766 AC006116.7-201ENST00000590141 756 ntBASIC3.73□□□□□ -1.81
HMGXB3Q12766 AC091834.1-201ENST00000614543 472 ntBASIC3.73□□□□□ -1.81
HMGXB3Q12766 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC3.73□□□□□ -1.81
HMGXB3Q12766 AC005539.1-201ENST00000443768 1479 ntBASIC3.72□□□□□ -1.81
HMGXB3Q12766 TMEM161BP1-201ENST00000457388 1457 ntBASIC3.72□□□□□ -1.81
HMGXB3Q12766 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC3.72□□□□□ -1.81
HMGXB3Q12766 SNORA68.2-201ENST00000391263 128 ntBASIC3.72□□□□□ -1.81
HMGXB3Q12766 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC3.72□□□□□ -1.81
HMGXB3Q12766 MTCYBP19-201ENST00000517463 1124 ntBASIC3.72□□□□□ -1.81
HMGXB3Q12766 ZKSCAN7P1-201ENST00000543668 673 ntBASIC3.72□□□□□ -1.81
HMGXB3Q12766 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC3.72□□□□□ -1.81
HMGXB3Q12766 VN1R80P-201ENST00000597126 338 ntBASIC3.72□□□□□ -1.81
HMGXB3Q12766 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
HMGXB3Q12766 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC3.72□□□□□ -1.81
HMGXB3Q12766 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.72□□□□□ -1.81
HMGXB3Q12766 AL359715.4-201ENST00000606629 1436 ntBASIC3.72□□□□□ -1.81
HMGXB3Q12766 AC116158.1-201ENST00000560231 2129 ntBASIC3.72□□□□□ -1.81
HMGXB3Q12766 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
HMGXB3Q12766 MTND4P35-201ENST00000604257 1375 ntBASIC3.71□□□□□ -1.81
HMGXB3Q12766 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
HMGXB3Q12766 SNORA51.4-201ENST00000364993 124 ntBASIC3.71□□□□□ -1.82
HMGXB3Q12766 USP9YP5-201ENST00000511770 630 ntBASIC3.71□□□□□ -1.82
HMGXB3Q12766 PDCD5P1-201ENST00000543528 309 ntBASIC3.71□□□□□ -1.82
HMGXB3Q12766 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC3.71□□□□□ -1.82
HMGXB3Q12766 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC3.71□□□□□ -1.82
HMGXB3Q12766 MIR3683-201ENST00000580847 82 ntBASIC3.71□□□□□ -1.82
HMGXB3Q12766 AP006248.2-201ENST00000623309 592 ntBASIC3.71□□□□□ -1.82
HMGXB3Q12766 AC010680.1-201ENST00000590024 3590 ntBASIC3.71□□□□□ -1.82
HMGXB3Q12766 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
HMGXB3Q12766 FRG1BP-201ENST00000278882 761 ntBASIC3.7□□□□□ -1.82
HMGXB3Q12766 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC3.7□□□□□ -1.82
HMGXB3Q12766 RPS15AP6-201ENST00000420703 385 ntBASIC3.7□□□□□ -1.82
HMGXB3Q12766 SETP10-201ENST00000424368 814 ntBASIC3.7□□□□□ -1.82
HMGXB3Q12766 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC3.7□□□□□ -1.82
HMGXB3Q12766 SUMO2P4-201ENST00000504193 276 ntBASIC3.7□□□□□ -1.82
HMGXB3Q12766 AC126177.3-201ENST00000551839 688 ntBASIC3.7□□□□□ -1.82
HMGXB3Q12766 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC3.7□□□□□ -1.82
HMGXB3Q12766 AL359821.1-201ENST00000605519 182 ntBASIC3.7□□□□□ -1.82
HMGXB3Q12766 AC002064.3-201ENST00000623448 346 ntBASIC3.7□□□□□ -1.82
HMGXB3Q12766 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC3.7□□□□□ -1.82
HMGXB3Q12766 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
HMGXB3Q12766 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
HMGXB3Q12766 OR5H15-201ENST00000383696 930 ntBASIC3.7□□□□□ -1.82
HMGXB3Q12766 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC3.7□□□□□ -1.82
HMGXB3Q12766 AGGF1P8-201ENST00000562979 1000 ntBASIC3.7□□□□□ -1.82
HMGXB3Q12766 MIR3186-201ENST00000577404 85 ntBASIC3.7□□□□□ -1.82
HMGXB3Q12766 AC087468.1-201ENST00000604365 630 ntBASIC3.7□□□□□ -1.82
HMGXB3Q12766 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC3.7□□□□□ -1.82
HMGXB3Q12766 AC095050.2-201ENST00000510748 1458 ntBASIC3.69□□□□□ -1.82
HMGXB3Q12766 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
HMGXB3Q12766 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
HMGXB3Q12766 RNU6-457P-201ENST00000363999 107 ntBASIC3.69□□□□□ -1.82
HMGXB3Q12766 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC3.69□□□□□ -1.82
HMGXB3Q12766 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC3.69□□□□□ -1.82
HMGXB3Q12766 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
HMGXB3Q12766 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
HMGXB3Q12766 FTX-214ENST00000638437 12267 ntTSL 5 BASIC3.68□□□□□ -1.82
HMGXB3Q12766 U8.10-201ENST00000384260 133 ntBASIC3.68□□□□□ -1.82
HMGXB3Q12766 MIR489-201ENST00000384923 84 ntBASIC3.68□□□□□ -1.82
HMGXB3Q12766 AC009414.1-201ENST00000427200 443 ntBASIC3.68□□□□□ -1.82
HMGXB3Q12766 EIF2S2P4-201ENST00000461070 984 ntBASIC3.68□□□□□ -1.82
HMGXB3Q12766 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC3.68□□□□□ -1.82
HMGXB3Q12766 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.68□□□□□ -1.82
HMGXB3Q12766 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC3.68□□□□□ -1.82
HMGXB3Q12766 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
HMGXB3Q12766 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
HMGXB3Q12766 MIR378A-201ENST00000362177 66 ntBASIC3.67□□□□□ -1.82
HMGXB3Q12766 RNU6ATAC38P-201ENST00000408119 126 ntBASIC3.67□□□□□ -1.82
HMGXB3Q12766 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC3.67□□□□□ -1.82
HMGXB3Q12766 AC091179.1-201ENST00000461606 579 ntBASIC3.67□□□□□ -1.82
HMGXB3Q12766 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC3.67□□□□□ -1.82
HMGXB3Q12766 AC008083.2-201ENST00000546707 476 ntBASIC3.67□□□□□ -1.82
HMGXB3Q12766 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC3.67□□□□□ -1.82
HMGXB3Q12766 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC3.67□□□□□ -1.82
HMGXB3Q12766 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
HMGXB3Q12766 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC3.67□□□□□ -1.82
HMGXB3Q12766 AC002076.2-201ENST00000617362 122 ntBASIC3.67□□□□□ -1.82
HMGXB3Q12766 VN1R7P-201ENST00000619242 903 ntBASIC3.67□□□□□ -1.82
HMGXB3Q12766 ANKRD62P1-201ENST00000434304 1623 ntBASIC3.67□□□□□ -1.82
HMGXB3Q12766 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC3.66□□□□□ -1.82
HMGXB3Q12766 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC3.66□□□□□ -1.82
HMGXB3Q12766 RPS6P12-201ENST00000432491 726 ntBASIC3.66□□□□□ -1.82
HMGXB3Q12766 OR52A4P-203ENST00000498233 1014 ntBASIC3.66□□□□□ -1.82
HMGXB3Q12766 GOLGA5P1-201ENST00000507317 980 ntBASIC3.66□□□□□ -1.82
HMGXB3Q12766 AC120053.1-201ENST00000607706 736 ntBASIC3.66□□□□□ -1.82
HMGXB3Q12766 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC3.66□□□□□ -1.82
HMGXB3Q12766 AP001005.3-201ENST00000622049 129 ntBASIC3.66□□□□□ -1.82
HMGXB3Q12766 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
HMGXB3Q12766 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
HMGXB3Q12766 AGL-204ENST00000370161 6923 ntTSL 5 BASIC3.66□□□□□ -1.82
HMGXB3Q12766 RNU6-661P-201ENST00000362409 107 ntBASIC3.65□□□□□ -1.82
HMGXB3Q12766 RNA5SP270-201ENST00000411361 118 ntBASIC3.65□□□□□ -1.82
HMGXB3Q12766 AL358453.1-201ENST00000422522 250 ntBASIC3.65□□□□□ -1.82
HMGXB3Q12766 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC3.65□□□□□ -1.82
HMGXB3Q12766 RPS27P27-201ENST00000498779 255 ntBASIC3.65□□□□□ -1.82
HMGXB3Q12766 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.65□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 96.7 ms