Protein–RNA interactions for Protein: Q04656

ATP7A, Copper-transporting ATPase 1, humanhuman

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP7AQ04656 Y_RNA.799-201ENST00000364992 102 ntBASIC3.21□□□□□ -1.9
ATP7AQ04656 SNORA17.3-201ENST00000391159 129 ntBASIC3.21□□□□□ -1.9
ATP7AQ04656 RNA5SP344-201ENST00000411081 104 ntBASIC3.21□□□□□ -1.9
ATP7AQ04656 AC004866.2-201ENST00000438285 481 ntBASIC3.21□□□□□ -1.9
ATP7AQ04656 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC3.21□□□□□ -1.9
ATP7AQ04656 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC3.21□□□□□ -1.9
ATP7AQ04656 SCARNA17.1-201ENST00000516211 143 ntBASIC3.21□□□□□ -1.9
ATP7AQ04656 SCARNA17.2-201ENST00000516334 143 ntBASIC3.21□□□□□ -1.9
ATP7AQ04656 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC3.21□□□□□ -1.9
ATP7AQ04656 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC3.21□□□□□ -1.9
ATP7AQ04656 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC3.21□□□□□ -1.9
ATP7AQ04656 AC011494.1-201ENST00000596454 237 ntBASIC3.21□□□□□ -1.9
ATP7AQ04656 snoU13.31-201ENST00000607291 104 ntBASIC3.21□□□□□ -1.9
ATP7AQ04656 AL451074.6-201ENST00000608512 729 ntBASIC3.21□□□□□ -1.9
ATP7AQ04656 SCARNA17.4-201ENST00000614296 143 ntBASIC3.21□□□□□ -1.9
ATP7AQ04656 AC074140.1-201ENST00000621617 208 ntBASIC3.21□□□□□ -1.9
ATP7AQ04656 AL359893.1-201ENST00000447628 1580 ntBASIC3.21□□□□□ -1.9
ATP7AQ04656 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
ATP7AQ04656 Y_RNA.508-201ENST00000384502 114 ntBASIC3.2□□□□□ -1.9
ATP7AQ04656 RNA5SP385-201ENST00000515947 110 ntBASIC3.2□□□□□ -1.9
ATP7AQ04656 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC3.2□□□□□ -1.9
ATP7AQ04656 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC3.2□□□□□ -1.9
ATP7AQ04656 AC023043.2-201ENST00000589678 1026 ntBASIC3.2□□□□□ -1.9
ATP7AQ04656 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
ATP7AQ04656 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.2□□□□□ -1.9
ATP7AQ04656 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
ATP7AQ04656 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
ATP7AQ04656 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
ATP7AQ04656 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC3.19□□□□□ -1.9
ATP7AQ04656 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
ATP7AQ04656 DYNLT3P1-201ENST00000378574 347 ntBASIC3.19□□□□□ -1.9
ATP7AQ04656 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC3.19□□□□□ -1.9
ATP7AQ04656 MUPP-201ENST00000438111 566 ntBASIC3.19□□□□□ -1.9
ATP7AQ04656 RPL38P4-201ENST00000502376 214 ntBASIC3.19□□□□□ -1.9
ATP7AQ04656 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC3.19□□□□□ -1.9
ATP7AQ04656 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC3.19□□□□□ -1.9
ATP7AQ04656 MIR4781-201ENST00000585250 76 ntBASIC3.19□□□□□ -1.9
ATP7AQ04656 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC3.19□□□□□ -1.9
ATP7AQ04656 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
ATP7AQ04656 AL161431.1-201ENST00000618966 4205 ntBASIC3.19□□□□□ -1.9
ATP7AQ04656 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
ATP7AQ04656 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
ATP7AQ04656 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
ATP7AQ04656 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC3.19□□□□□ -1.9
ATP7AQ04656 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
ATP7AQ04656 C1orf185-201ENST00000371759 915 ntAPPRIS P2 TSL 2 BASIC3.19□□□□□ -1.9
ATP7AQ04656 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC3.19□□□□□ -1.9
ATP7AQ04656 RNA5SP213-201ENST00000391031 106 ntBASIC3.19□□□□□ -1.9
ATP7AQ04656 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC3.19□□□□□ -1.9
ATP7AQ04656 AL035551.1-201ENST00000446931 348 ntBASIC3.19□□□□□ -1.9
ATP7AQ04656 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC3.19□□□□□ -1.9
ATP7AQ04656 TRBV26-201ENST00000456572 344 ntBASIC3.19□□□□□ -1.9
ATP7AQ04656 RAD51AP1P1-201ENST00000484195 1001 ntBASIC3.19□□□□□ -1.9
ATP7AQ04656 RPL36AP21-201ENST00000490372 323 ntBASIC3.19□□□□□ -1.9
ATP7AQ04656 AC026412.2-201ENST00000512270 1075 ntBASIC3.19□□□□□ -1.9
ATP7AQ04656 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
ATP7AQ04656 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
ATP7AQ04656 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.18□□□□□ -1.9
ATP7AQ04656 SNORA25.6-201ENST00000364121 118 ntBASIC3.18□□□□□ -1.9
ATP7AQ04656 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
ATP7AQ04656 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC3.18□□□□□ -1.9
ATP7AQ04656 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.18□□□□□ -1.9
ATP7AQ04656 AC072039.1-201ENST00000477611 581 ntBASIC3.18□□□□□ -1.9
ATP7AQ04656 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.18□□□□□ -1.9
ATP7AQ04656 RPS26P24-201ENST00000497656 331 ntBASIC3.18□□□□□ -1.9
ATP7AQ04656 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC3.18□□□□□ -1.9
ATP7AQ04656 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC3.18□□□□□ -1.9
ATP7AQ04656 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC3.18□□□□□ -1.9
ATP7AQ04656 CU459211.1-201ENST00000635667 749 ntBASIC3.18□□□□□ -1.9
ATP7AQ04656 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
ATP7AQ04656 THUMPD3P1-201ENST00000506556 1480 ntBASIC3.17□□□□□ -1.9
ATP7AQ04656 U8.8-201ENST00000365399 135 ntBASIC3.17□□□□□ -1.9
ATP7AQ04656 SNORA48.3-201ENST00000391081 134 ntBASIC3.17□□□□□ -1.9
ATP7AQ04656 RNU6-321P-201ENST00000410912 106 ntBASIC3.17□□□□□ -1.9
ATP7AQ04656 AC048351.1-201ENST00000420064 602 ntBASIC3.17□□□□□ -1.9
ATP7AQ04656 AL445646.1-201ENST00000431784 216 ntBASIC3.17□□□□□ -1.9
ATP7AQ04656 RPL36AP6-201ENST00000435770 321 ntBASIC3.17□□□□□ -1.9
ATP7AQ04656 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC3.17□□□□□ -1.9
ATP7AQ04656 AC091917.2-201ENST00000505002 744 ntBASIC3.17□□□□□ -1.9
ATP7AQ04656 TRAV11-201ENST00000539512 339 ntBASIC3.17□□□□□ -1.9
ATP7AQ04656 PWRN1-206ENST00000565512 433 ntTSL 2 BASIC3.17□□□□□ -1.9
ATP7AQ04656 AL359094.1-202ENST00000629917 1113 ntTSL 5 BASIC3.17□□□□□ -1.9
ATP7AQ04656 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC3.17□□□□□ -1.9
ATP7AQ04656 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
ATP7AQ04656 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
ATP7AQ04656 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
ATP7AQ04656 SNORD6-201ENST00000365444 73 ntBASIC3.16□□□□□ -1.9
ATP7AQ04656 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.16□□□□□ -1.9
ATP7AQ04656 NPM1P10-201ENST00000398310 865 ntBASIC3.16□□□□□ -1.9
ATP7AQ04656 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC3.16□□□□□ -1.9
ATP7AQ04656 CYCSP49-201ENST00000420810 319 ntBASIC3.16□□□□□ -1.9
ATP7AQ04656 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC3.16□□□□□ -1.9
ATP7AQ04656 MTCYBP14-201ENST00000457471 715 ntBASIC3.16□□□□□ -1.9
ATP7AQ04656 RNA5SP445-201ENST00000515889 115 ntBASIC3.16□□□□□ -1.9
ATP7AQ04656 AC007536.1-201ENST00000533382 349 ntBASIC3.16□□□□□ -1.9
ATP7AQ04656 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC3.16□□□□□ -1.9
ATP7AQ04656 AC078814.3-201ENST00000553036 491 ntBASIC3.16□□□□□ -1.9
ATP7AQ04656 AC073348.1-201ENST00000623002 331 ntBASIC3.16□□□□□ -1.9
ATP7AQ04656 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
ATP7AQ04656 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 86.1 ms