Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC1.39□□□□□ -2.19
HSPG2P98160 FRG1BP-201ENST00000278882 761 ntBASIC1.39□□□□□ -2.19
HSPG2P98160 RNU6-249P-201ENST00000363016 102 ntBASIC1.39□□□□□ -2.19
HSPG2P98160 RNY1P14-201ENST00000384426 108 ntBASIC1.39□□□□□ -2.19
HSPG2P98160 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC1.39□□□□□ -2.19
HSPG2P98160 AC147055.1-201ENST00000509261 750 ntBASIC1.39□□□□□ -2.19
HSPG2P98160 AC011492.1-201ENST00000600023 315 ntBASIC1.39□□□□□ -2.19
HSPG2P98160 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
HSPG2P98160 AL136964.1-201ENST00000622038 2990 ntBASIC1.39□□□□□ -2.19
HSPG2P98160 AC068700.1-201ENST00000565862 3754 ntBASIC1.39□□□□□ -2.19
HSPG2P98160 Z99496.1-201ENST00000469424 1477 ntBASIC1.39□□□□□ -2.19
HSPG2P98160 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC1.39□□□□□ -2.19
HSPG2P98160 RNU1-91P-201ENST00000364746 163 ntBASIC1.39□□□□□ -2.19
HSPG2P98160 RNU1-100P-201ENST00000365255 165 ntBASIC1.39□□□□□ -2.19
HSPG2P98160 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
HSPG2P98160 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC1.39□□□□□ -2.19
HSPG2P98160 AC125238.1-201ENST00000448842 249 ntBASIC1.39□□□□□ -2.19
HSPG2P98160 SEPT7P3-201ENST00000455017 621 ntBASIC1.39□□□□□ -2.19
HSPG2P98160 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC1.39□□□□□ -2.19
HSPG2P98160 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC1.39□□□□□ -2.19
HSPG2P98160 RFPL1S-203ENST00000539579 330 ntBASIC1.39□□□□□ -2.19
HSPG2P98160 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC1.39□□□□□ -2.19
HSPG2P98160 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC1.39□□□□□ -2.19
HSPG2P98160 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC1.39□□□□□ -2.19
HSPG2P98160 AC016590.3-201ENST00000611171 753 ntBASIC1.39□□□□□ -2.19
HSPG2P98160 AC245517.5-201ENST00000611529 162 ntBASIC1.39□□□□□ -2.19
HSPG2P98160 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC1.39□□□□□ -2.19
HSPG2P98160 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
HSPG2P98160 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
HSPG2P98160 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
HSPG2P98160 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC1.39□□□□□ -2.19
HSPG2P98160 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
HSPG2P98160 MIR9-3-201ENST00000385084 90 ntBASIC1.38□□□□□ -2.19
HSPG2P98160 HMGB3P23-201ENST00000414981 585 ntBASIC1.38□□□□□ -2.19
HSPG2P98160 RPL23AP58-201ENST00000440453 469 ntBASIC1.38□□□□□ -2.19
HSPG2P98160 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC1.38□□□□□ -2.19
HSPG2P98160 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC1.38□□□□□ -2.19
HSPG2P98160 ATP13A5-205ENST00000620313 709 ntTSL 5 BASIC1.38□□□□□ -2.19
HSPG2P98160 IQCM-206ENST00000636793 1900 ntAPPRIS P5 TSL 5 BASIC1.38□□□□□ -2.19
HSPG2P98160 RNA5SP190-201ENST00000365222 118 ntBASIC1.38□□□□□ -2.19
HSPG2P98160 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC1.38□□□□□ -2.19
HSPG2P98160 RNU2-6P-201ENST00000411404 190 ntBASIC1.38□□□□□ -2.19
HSPG2P98160 IPMKP1-201ENST00000425988 855 ntBASIC1.38□□□□□ -2.19
HSPG2P98160 AL450263.2-201ENST00000439400 589 ntBASIC1.38□□□□□ -2.19
HSPG2P98160 COX6CP2-201ENST00000444980 225 ntBASIC1.38□□□□□ -2.19
HSPG2P98160 SNORA9.3-201ENST00000516383 129 ntBASIC1.38□□□□□ -2.19
HSPG2P98160 RNU4ATAC15P-201ENST00000516415 126 ntBASIC1.38□□□□□ -2.19
HSPG2P98160 AC074140.1-201ENST00000621617 208 ntBASIC1.38□□□□□ -2.19
HSPG2P98160 GMFB-210ENST00000628554 639 ntTSL 4 BASIC1.38□□□□□ -2.19
HSPG2P98160 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
HSPG2P98160 OR11H5P-202ENST00000641612 1325 ntBASIC1.38□□□□□ -2.19
HSPG2P98160 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC1.38□□□□□ -2.19
HSPG2P98160 TTN-204ENST00000360870 18218 ntTSL 5 BASIC1.38□□□□□ -2.19
HSPG2P98160 MIR3074-201ENST00000384885 81 ntBASIC1.38□□□□□ -2.19
HSPG2P98160 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC1.38□□□□□ -2.19
HSPG2P98160 LINC00888-204ENST00000487386 421 ntBASIC1.38□□□□□ -2.19
HSPG2P98160 RN7SKP234-201ENST00000517173 224 ntBASIC1.38□□□□□ -2.19
HSPG2P98160 RN7SL622P-201ENST00000585292 275 ntBASIC1.38□□□□□ -2.19
HSPG2P98160 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
HSPG2P98160 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC1.38□□□□□ -2.19
HSPG2P98160 Y_RNA.295-201ENST00000364918 102 ntBASIC1.38□□□□□ -2.19
HSPG2P98160 AL512633.1-201ENST00000399931 655 ntBASIC1.38□□□□□ -2.19
HSPG2P98160 RPS20P25-201ENST00000412447 352 ntBASIC1.38□□□□□ -2.19
HSPG2P98160 RPL23AP76-201ENST00000441860 458 ntBASIC1.38□□□□□ -2.19
HSPG2P98160 EIF2S2P4-201ENST00000461070 984 ntBASIC1.38□□□□□ -2.19
HSPG2P98160 RPL5P13-201ENST00000462840 709 ntBASIC1.38□□□□□ -2.19
HSPG2P98160 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC1.38□□□□□ -2.19
HSPG2P98160 AC092851.1-201ENST00000535964 478 ntBASIC1.38□□□□□ -2.19
HSPG2P98160 MIR5007-201ENST00000583098 95 ntBASIC1.38□□□□□ -2.19
HSPG2P98160 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
HSPG2P98160 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
HSPG2P98160 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
HSPG2P98160 MIR96-201ENST00000362288 78 ntBASIC1.37□□□□□ -2.19
HSPG2P98160 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC1.37□□□□□ -2.19
HSPG2P98160 FAT1P1-201ENST00000406588 507 ntBASIC1.37□□□□□ -2.19
HSPG2P98160 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC1.37□□□□□ -2.19
HSPG2P98160 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC1.37□□□□□ -2.19
HSPG2P98160 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.37□□□□□ -2.19
HSPG2P98160 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC1.37□□□□□ -2.19
HSPG2P98160 AC010546.1-201ENST00000569391 485 ntBASIC1.37□□□□□ -2.19
HSPG2P98160 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC1.37□□□□□ -2.19
HSPG2P98160 XPOTP1-201ENST00000443317 2398 ntBASIC1.37□□□□□ -2.19
HSPG2P98160 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.37□□□□□ -2.19
HSPG2P98160 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC1.37□□□□□ -2.19
HSPG2P98160 AL358453.1-201ENST00000422522 250 ntBASIC1.37□□□□□ -2.19
HSPG2P98160 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC1.37□□□□□ -2.19
HSPG2P98160 MEPE-206ENST00000511670 550 ntTSL 4 BASIC1.37□□□□□ -2.19
HSPG2P98160 REXO2-218ENST00000544827 880 ntTSL 3 BASIC1.37□□□□□ -2.19
HSPG2P98160 AC095038.3-201ENST00000634439 195 ntBASIC1.37□□□□□ -2.19
HSPG2P98160 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC1.37□□□□□ -2.19
HSPG2P98160 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC1.37□□□□□ -2.19
HSPG2P98160 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
HSPG2P98160 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC1.37□□□□□ -2.19
HSPG2P98160 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC1.37□□□□□ -2.19
HSPG2P98160 Y_RNA.224-201ENST00000364308 111 ntBASIC1.37□□□□□ -2.19
HSPG2P98160 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC1.37□□□□□ -2.19
HSPG2P98160 Z73417.1-201ENST00000447373 778 ntBASIC1.37□□□□□ -2.19
HSPG2P98160 AC093392.2-201ENST00000450682 337 ntBASIC1.37□□□□□ -2.19
HSPG2P98160 RPL38P4-201ENST00000502376 214 ntBASIC1.37□□□□□ -2.19
HSPG2P98160 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC1.37□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 97.9 ms