Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 AL158801.5-201ENST00000623123 465 ntBASIC4.05□□□□□ -1.76
RAE1P78406 AC079597.1-201ENST00000624306 508 ntBASIC4.05□□□□□ -1.76
RAE1P78406 AC091925.2-201ENST00000625059 256 ntBASIC4.05□□□□□ -1.76
RAE1P78406 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.05□□□□□ -1.76
RAE1P78406 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
RAE1P78406 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC4.04□□□□□ -1.76
RAE1P78406 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
RAE1P78406 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
RAE1P78406 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
RAE1P78406 AL158163.1-201ENST00000603915 1649 ntBASIC4.04□□□□□ -1.76
RAE1P78406 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
RAE1P78406 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC4.04□□□□□ -1.76
RAE1P78406 RNA5SP447-201ENST00000363749 119 ntBASIC4.04□□□□□ -1.76
RAE1P78406 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC4.04□□□□□ -1.76
RAE1P78406 MIR192-201ENST00000384915 110 ntBASIC4.04□□□□□ -1.76
RAE1P78406 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
RAE1P78406 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
RAE1P78406 GSTA9P-201ENST00000406231 611 ntBASIC4.04□□□□□ -1.76
RAE1P78406 RNA5SP36-201ENST00000410197 133 ntBASIC4.04□□□□□ -1.76
RAE1P78406 ELOCP19-201ENST00000411919 318 ntBASIC4.04□□□□□ -1.76
RAE1P78406 AC245052.5-201ENST00000416320 649 ntBASIC4.04□□□□□ -1.76
RAE1P78406 MTCYBP24-201ENST00000420387 1106 ntBASIC4.04□□□□□ -1.76
RAE1P78406 USP9YP36-201ENST00000424581 829 ntBASIC4.04□□□□□ -1.76
RAE1P78406 MRPS10P2-201ENST00000431226 381 ntBASIC4.04□□□□□ -1.76
RAE1P78406 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.04□□□□□ -1.76
RAE1P78406 AC011998.1-201ENST00000433403 117 ntBASIC4.04□□□□□ -1.76
RAE1P78406 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC4.04□□□□□ -1.76
RAE1P78406 CBX1P1-201ENST00000440184 427 ntBASIC4.04□□□□□ -1.76
RAE1P78406 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
RAE1P78406 RPL29P29-201ENST00000448725 423 ntBASIC4.04□□□□□ -1.76
RAE1P78406 AC079448.1-201ENST00000449377 373 ntBASIC4.04□□□□□ -1.76
RAE1P78406 PSPHP1-201ENST00000450062 261 ntBASIC4.04□□□□□ -1.76
RAE1P78406 AC003071.1-201ENST00000451219 789 ntBASIC4.04□□□□□ -1.76
RAE1P78406 FGF7P6-202ENST00000451282 293 ntBASIC4.04□□□□□ -1.76
RAE1P78406 AL353691.1-201ENST00000451332 387 ntBASIC4.04□□□□□ -1.76
RAE1P78406 AL359385.1-201ENST00000456509 365 ntBASIC4.04□□□□□ -1.76
RAE1P78406 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC4.04□□□□□ -1.76
RAE1P78406 RBM43P1-201ENST00000476891 1081 ntBASIC4.04□□□□□ -1.76
RAE1P78406 RN7SL810P-201ENST00000493031 276 ntBASIC4.04□□□□□ -1.76
RAE1P78406 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
RAE1P78406 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC4.04□□□□□ -1.76
RAE1P78406 AC134698.4-201ENST00000523451 826 ntBASIC4.04□□□□□ -1.76
RAE1P78406 AP003497.1-201ENST00000528472 562 ntBASIC4.04□□□□□ -1.76
RAE1P78406 MTCYBP41-201ENST00000528913 1123 ntBASIC4.04□□□□□ -1.76
RAE1P78406 AP003385.6-201ENST00000531603 374 ntBASIC4.04□□□□□ -1.76
RAE1P78406 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
RAE1P78406 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC4.04□□□□□ -1.76
RAE1P78406 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC4.04□□□□□ -1.76
RAE1P78406 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC4.04□□□□□ -1.76
RAE1P78406 AC123904.2-201ENST00000548059 300 ntBASIC4.04□□□□□ -1.76
RAE1P78406 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC4.04□□□□□ -1.76
RAE1P78406 SETP2-201ENST00000553886 926 ntBASIC4.04□□□□□ -1.76
RAE1P78406 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC4.04□□□□□ -1.76
RAE1P78406 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.04□□□□□ -1.76
RAE1P78406 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC4.04□□□□□ -1.76
RAE1P78406 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC4.04□□□□□ -1.76
RAE1P78406 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC4.04□□□□□ -1.76
RAE1P78406 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC4.04□□□□□ -1.76
RAE1P78406 AC115621.1-201ENST00000604653 858 ntBASIC4.04□□□□□ -1.76
RAE1P78406 AP000860.1-201ENST00000605250 559 ntBASIC4.04□□□□□ -1.76
RAE1P78406 AF250324.2-201ENST00000608299 610 ntBASIC4.04□□□□□ -1.76
RAE1P78406 AC090517.2-201ENST00000614966 680 ntBASIC4.04□□□□□ -1.76
RAE1P78406 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC4.04□□□□□ -1.76
RAE1P78406 AP000346.3-201ENST00000622821 210 ntBASIC4.04□□□□□ -1.76
RAE1P78406 AC068880.5-201ENST00000624331 290 ntBASIC4.04□□□□□ -1.76
RAE1P78406 AC124864.2-201ENST00000624736 186 ntBASIC4.04□□□□□ -1.76
RAE1P78406 AL157786.1-207ENST00000627771 695 ntBASIC4.04□□□□□ -1.76
RAE1P78406 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.04□□□□□ -1.76
RAE1P78406 MTCO1P24-201ENST00000515438 1558 ntBASIC4.04□□□□□ -1.76
RAE1P78406 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
RAE1P78406 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
RAE1P78406 AC009902.3-201ENST00000606235 2172 ntBASIC4.04□□□□□ -1.76
RAE1P78406 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
RAE1P78406 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC4.04□□□□□ -1.76
RAE1P78406 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.04□□□□□ -1.76
RAE1P78406 AC011266.1-201ENST00000624119 3569 ntBASIC4.04□□□□□ -1.76
RAE1P78406 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
RAE1P78406 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC4.04□□□□□ -1.76
RAE1P78406 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC4.04□□□□□ -1.76
RAE1P78406 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
RAE1P78406 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
RAE1P78406 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
RAE1P78406 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.76
RAE1P78406 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.76
RAE1P78406 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
RAE1P78406 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC4.03□□□□□ -1.76
RAE1P78406 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.03□□□□□ -1.76
RAE1P78406 AC026951.1-201ENST00000559530 2459 ntBASIC4.03□□□□□ -1.76
RAE1P78406 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
RAE1P78406 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.03□□□□□ -1.76
RAE1P78406 AC011460.1-201ENST00000636268 1834 ntBASIC4.03□□□□□ -1.76
RAE1P78406 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC4.03□□□□□ -1.76
RAE1P78406 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
RAE1P78406 RNU1-14P-201ENST00000362759 152 ntBASIC4.03□□□□□ -1.76
RAE1P78406 Y_RNA.493-201ENST00000384422 102 ntBASIC4.03□□□□□ -1.76
RAE1P78406 MRPL42P2-201ENST00000403169 426 ntBASIC4.03□□□□□ -1.76
RAE1P78406 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
RAE1P78406 RNA5SP56-201ENST00000410277 118 ntBASIC4.03□□□□□ -1.76
RAE1P78406 RNU6-195P-201ENST00000411352 109 ntBASIC4.03□□□□□ -1.76
RAE1P78406 MTND1P21-201ENST00000412991 285 ntBASIC4.03□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 78.4 ms