Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC2.24□□□□□ -2.05
UBA52P62987 AC112653.1-201ENST00000443851 386 ntBASIC2.24□□□□□ -2.05
UBA52P62987 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC2.24□□□□□ -2.05
UBA52P62987 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC2.24□□□□□ -2.05
UBA52P62987 AP000936.2-201ENST00000447151 681 ntBASIC2.24□□□□□ -2.05
UBA52P62987 BX276092.4-201ENST00000452056 248 ntBASIC2.24□□□□□ -2.05
UBA52P62987 AC126182.1-201ENST00000478134 357 ntBASIC2.24□□□□□ -2.05
UBA52P62987 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC2.24□□□□□ -2.05
UBA52P62987 AC104126.1-201ENST00000504004 711 ntTSL 3 BASIC2.24□□□□□ -2.05
UBA52P62987 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC2.24□□□□□ -2.05
UBA52P62987 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC2.24□□□□□ -2.05
UBA52P62987 ATP5F1P7-201ENST00000567330 760 ntBASIC2.24□□□□□ -2.05
UBA52P62987 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.24□□□□□ -2.05
UBA52P62987 AC245128.3-201ENST00000594721 748 ntBASIC2.24□□□□□ -2.05
UBA52P62987 VN1R7P-201ENST00000619242 903 ntBASIC2.24□□□□□ -2.05
UBA52P62987 AC092608.2-201ENST00000624427 218 ntBASIC2.24□□□□□ -2.05
UBA52P62987 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
UBA52P62987 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.24□□□□□ -2.05
UBA52P62987 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.24□□□□□ -2.05
UBA52P62987 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
UBA52P62987 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC2.23□□□□□ -2.05
UBA52P62987 RNU6-1077P-201ENST00000410506 102 ntBASIC2.23□□□□□ -2.05
UBA52P62987 RNA5SP21-201ENST00000410917 96 ntBASIC2.23□□□□□ -2.05
UBA52P62987 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC2.23□□□□□ -2.05
UBA52P62987 AC004022.2-201ENST00000413824 193 ntBASIC2.23□□□□□ -2.05
UBA52P62987 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC2.23□□□□□ -2.05
UBA52P62987 AL513328.1-201ENST00000446460 224 ntBASIC2.23□□□□□ -2.05
UBA52P62987 AC090543.1-201ENST00000492168 485 ntBASIC2.23□□□□□ -2.05
UBA52P62987 AC112496.1-201ENST00000497961 562 ntTSL 5 BASIC2.23□□□□□ -2.05
UBA52P62987 SNORA31.21-201ENST00000517180 77 ntBASIC2.23□□□□□ -2.05
UBA52P62987 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC2.23□□□□□ -2.05
UBA52P62987 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
UBA52P62987 OR6C73P-201ENST00000546432 358 ntBASIC2.23□□□□□ -2.05
UBA52P62987 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC2.23□□□□□ -2.05
UBA52P62987 AC234778.2-201ENST00000566241 354 ntBASIC2.23□□□□□ -2.05
UBA52P62987 AC008687.2-201ENST00000597865 520 ntBASIC2.23□□□□□ -2.05
UBA52P62987 AC019159.1-201ENST00000605094 187 ntBASIC2.23□□□□□ -2.05
UBA52P62987 HSPE1P14-201ENST00000605812 302 ntBASIC2.23□□□□□ -2.05
UBA52P62987 AC243829.7-201ENST00000633081 225 ntBASIC2.23□□□□□ -2.05
UBA52P62987 AJ009632.2-205ENST00000635225 1169 ntTSL 5 BASIC2.23□□□□□ -2.05
UBA52P62987 AC080100.1-201ENST00000624239 5356 ntBASIC2.23□□□□□ -2.05
UBA52P62987 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
UBA52P62987 ELF2P3-201ENST00000445099 1506 ntBASIC2.22□□□□□ -2.05
UBA52P62987 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC2.22□□□□□ -2.05
UBA52P62987 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC2.22□□□□□ -2.05
UBA52P62987 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.22□□□□□ -2.05
UBA52P62987 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
UBA52P62987 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
UBA52P62987 RNU1-100P-201ENST00000365255 165 ntBASIC2.22□□□□□ -2.05
UBA52P62987 MIR144-201ENST00000384886 86 ntBASIC2.22□□□□□ -2.05
UBA52P62987 RNA5SP210-201ENST00000391034 120 ntBASIC2.22□□□□□ -2.05
UBA52P62987 AL356057.1-202ENST00000402263 756 ntBASIC2.22□□□□□ -2.05
UBA52P62987 AF274854.1-201ENST00000413236 615 ntBASIC2.22□□□□□ -2.05
UBA52P62987 AC109780.2-201ENST00000413467 845 ntBASIC2.22□□□□□ -2.05
UBA52P62987 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC2.22□□□□□ -2.05
UBA52P62987 B3GALNT1P1-201ENST00000420569 975 ntBASIC2.22□□□□□ -2.05
UBA52P62987 MYL8P-204ENST00000431574 518 ntBASIC2.22□□□□□ -2.05
UBA52P62987 AL121890.1-201ENST00000435457 205 ntBASIC2.22□□□□□ -2.05
UBA52P62987 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.22□□□□□ -2.05
UBA52P62987 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC2.22□□□□□ -2.05
UBA52P62987 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC2.22□□□□□ -2.05
UBA52P62987 APOA2-205ENST00000468465 421 ntTSL 2 BASIC2.22□□□□□ -2.05
UBA52P62987 TRBV8-1-201ENST00000481590 279 ntBASIC2.22□□□□□ -2.05
UBA52P62987 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC2.22□□□□□ -2.05
UBA52P62987 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.22□□□□□ -2.05
UBA52P62987 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.22□□□□□ -2.05
UBA52P62987 RPL7L1P13-201ENST00000511702 739 ntBASIC2.22□□□□□ -2.05
UBA52P62987 AP002770.2-201ENST00000543613 532 ntBASIC2.22□□□□□ -2.05
UBA52P62987 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.22□□□□□ -2.05
UBA52P62987 MIR5092-201ENST00000583139 88 ntBASIC2.22□□□□□ -2.05
UBA52P62987 AC008277.2-201ENST00000605196 797 ntBASIC2.22□□□□□ -2.05
UBA52P62987 AL161912.3-201ENST00000605404 628 ntBASIC2.22□□□□□ -2.05
UBA52P62987 AC087241.4-201ENST00000612441 480 ntBASIC2.22□□□□□ -2.05
UBA52P62987 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC2.22□□□□□ -2.05
UBA52P62987 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC2.22□□□□□ -2.05
UBA52P62987 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC2.22□□□□□ -2.05
UBA52P62987 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
UBA52P62987 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
UBA52P62987 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.22□□□□□ -2.05
UBA52P62987 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC2.22□□□□□ -2.05
UBA52P62987 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.21□□□□□ -2.05
UBA52P62987 RNA5SP432-201ENST00000362480 116 ntBASIC2.21□□□□□ -2.06
UBA52P62987 RNU1-112P-201ENST00000364401 164 ntBASIC2.21□□□□□ -2.06
UBA52P62987 U8.8-201ENST00000365399 135 ntBASIC2.21□□□□□ -2.06
UBA52P62987 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC2.21□□□□□ -2.06
UBA52P62987 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC2.21□□□□□ -2.06
UBA52P62987 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC2.21□□□□□ -2.06
UBA52P62987 AL513124.1-201ENST00000450410 614 ntBASIC2.21□□□□□ -2.06
UBA52P62987 AC126121.1-201ENST00000482313 553 ntBASIC2.21□□□□□ -2.06
UBA52P62987 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
UBA52P62987 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC2.21□□□□□ -2.06
UBA52P62987 YWHAEP4-201ENST00000505390 198 ntBASIC2.21□□□□□ -2.06
UBA52P62987 AC107222.1-201ENST00000510899 637 ntBASIC2.21□□□□□ -2.06
UBA52P62987 AC008413.1-201ENST00000511864 177 ntBASIC2.21□□□□□ -2.06
UBA52P62987 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.21□□□□□ -2.06
UBA52P62987 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC2.21□□□□□ -2.06
UBA52P62987 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC2.21□□□□□ -2.06
UBA52P62987 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
UBA52P62987 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
UBA52P62987 AC106734.1-201ENST00000568646 663 ntBASIC2.21□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 97.4 ms