Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 RNU1-106P-201ENST00000384382 164 ntBASIC4.73□□□□□ -1.65
GFRA1P56159 SNORA70-201ENST00000384436 135 ntBASIC4.73□□□□□ -1.65
GFRA1P56159 MIR135A2-201ENST00000384854 100 ntBASIC4.73□□□□□ -1.65
GFRA1P56159 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
GFRA1P56159 SOD2P1-201ENST00000396543 562 ntBASIC4.73□□□□□ -1.65
GFRA1P56159 RPL21P67-201ENST00000402896 478 ntBASIC4.73□□□□□ -1.65
GFRA1P56159 AL359634.1-202ENST00000404721 284 ntBASIC4.73□□□□□ -1.65
GFRA1P56159 AL590004.1-201ENST00000405321 300 ntBASIC4.73□□□□□ -1.65
GFRA1P56159 RNU6-712P-201ENST00000410558 100 ntBASIC4.73□□□□□ -1.65
GFRA1P56159 RN7SKP126-201ENST00000411143 300 ntBASIC4.73□□□□□ -1.65
GFRA1P56159 RAB28P1-201ENST00000411517 641 ntBASIC4.73□□□□□ -1.65
GFRA1P56159 EIF4A1P3-201ENST00000411521 244 ntBASIC4.73□□□□□ -1.65
GFRA1P56159 RPL23AP27-201ENST00000415161 451 ntBASIC4.73□□□□□ -1.65
GFRA1P56159 RPS7P15-201ENST00000415804 584 ntBASIC4.73□□□□□ -1.65
GFRA1P56159 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC4.73□□□□□ -1.65
GFRA1P56159 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC4.73□□□□□ -1.65
GFRA1P56159 EI24P4-201ENST00000423683 1078 ntBASIC4.73□□□□□ -1.65
GFRA1P56159 AC093106.2-201ENST00000428212 385 ntBASIC4.73□□□□□ -1.65
GFRA1P56159 CALM2P2-201ENST00000428512 440 ntBASIC4.73□□□□□ -1.65
GFRA1P56159 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
GFRA1P56159 ZDHHC20P1-204ENST00000435787 423 ntBASIC4.73□□□□□ -1.65
GFRA1P56159 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC4.73□□□□□ -1.65
GFRA1P56159 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
GFRA1P56159 RNU6-1208P-201ENST00000459588 107 ntBASIC4.73□□□□□ -1.65
GFRA1P56159 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC4.73□□□□□ -1.65
GFRA1P56159 AC022133.1-201ENST00000490961 571 ntBASIC4.73□□□□□ -1.65
GFRA1P56159 Y_RNA.654-201ENST00000497848 106 ntBASIC4.73□□□□□ -1.65
GFRA1P56159 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC4.73□□□□□ -1.65
GFRA1P56159 AC012400.1-201ENST00000518452 381 ntBASIC4.73□□□□□ -1.65
GFRA1P56159 RANP3-201ENST00000530970 276 ntBASIC4.73□□□□□ -1.65
GFRA1P56159 ARL6IP1P1-201ENST00000545836 610 ntBASIC4.73□□□□□ -1.65
GFRA1P56159 HMGN2P6-201ENST00000551091 273 ntBASIC4.73□□□□□ -1.65
GFRA1P56159 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC4.73□□□□□ -1.65
GFRA1P56159 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC4.73□□□□□ -1.65
GFRA1P56159 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC4.73□□□□□ -1.65
GFRA1P56159 AC011447.4-201ENST00000587562 111 ntBASIC4.73□□□□□ -1.65
GFRA1P56159 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
GFRA1P56159 PART1_1.1-201ENST00000611761 217 ntBASIC4.73□□□□□ -1.65
GFRA1P56159 RPSAP73-201ENST00000614820 330 ntBASIC4.73□□□□□ -1.65
GFRA1P56159 MIR7155-201ENST00000615925 56 ntBASIC4.73□□□□□ -1.65
GFRA1P56159 AL589994.2-201ENST00000621124 579 ntBASIC4.73□□□□□ -1.65
GFRA1P56159 C2orf27A-204ENST00000623058 969 ntBASIC4.73□□□□□ -1.65
GFRA1P56159 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC4.73□□□□□ -1.65
GFRA1P56159 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC4.73□□□□□ -1.65
GFRA1P56159 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC4.73□□□□□ -1.65
GFRA1P56159 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC4.73□□□□□ -1.65
GFRA1P56159 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC4.73□□□□□ -1.65
GFRA1P56159 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
GFRA1P56159 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC4.73□□□□□ -1.65
GFRA1P56159 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
GFRA1P56159 AL137003.2-201ENST00000606924 2538 ntBASIC4.73□□□□□ -1.65
GFRA1P56159 RMST-209ENST00000639542 3269 ntTSL 5 BASIC4.73□□□□□ -1.65
GFRA1P56159 AL442639.1-201ENST00000625030 1899 ntBASIC4.73□□□□□ -1.65
GFRA1P56159 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC4.73□□□□□ -1.65
GFRA1P56159 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC4.73□□□□□ -1.65
GFRA1P56159 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC4.72□□□□□ -1.65
GFRA1P56159 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC4.72□□□□□ -1.65
GFRA1P56159 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
GFRA1P56159 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC4.72□□□□□ -1.65
GFRA1P56159 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC4.72□□□□□ -1.65
GFRA1P56159 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
GFRA1P56159 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
GFRA1P56159 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
GFRA1P56159 TPTE2P4-201ENST00000258589 1605 ntBASIC4.72□□□□□ -1.65
GFRA1P56159 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC4.72□□□□□ -1.65
GFRA1P56159 AL049555.1-201ENST00000562834 1933 ntBASIC4.72□□□□□ -1.65
GFRA1P56159 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC4.72□□□□□ -1.65
GFRA1P56159 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC4.72□□□□□ -1.65
GFRA1P56159 U3.12-201ENST00000364498 214 ntBASIC4.72□□□□□ -1.65
GFRA1P56159 RN7SKP153-201ENST00000365026 316 ntBASIC4.72□□□□□ -1.65
GFRA1P56159 PARD3-204ENST00000374768 799 ntTSL 3 BASIC4.72□□□□□ -1.65
GFRA1P56159 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
GFRA1P56159 Y_RNA.387-201ENST00000383918 102 ntBASIC4.72□□□□□ -1.65
GFRA1P56159 SNORA70.6-201ENST00000383934 134 ntBASIC4.72□□□□□ -1.65
GFRA1P56159 Y_RNA.414-201ENST00000384011 101 ntBASIC4.72□□□□□ -1.65
GFRA1P56159 MIR1182-201ENST00000408363 97 ntBASIC4.72□□□□□ -1.65
GFRA1P56159 RNU6ATAC21P-201ENST00000408656 126 ntBASIC4.72□□□□□ -1.65
GFRA1P56159 USP9YP20-201ENST00000419224 558 ntBASIC4.72□□□□□ -1.65
GFRA1P56159 AC099677.1-201ENST00000420575 175 ntBASIC4.72□□□□□ -1.65
GFRA1P56159 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC4.72□□□□□ -1.65
GFRA1P56159 RPL7P46-201ENST00000425129 740 ntBASIC4.72□□□□□ -1.65
GFRA1P56159 AL360081.1-201ENST00000428299 555 ntBASIC4.72□□□□□ -1.65
GFRA1P56159 KCTD9P3-201ENST00000434597 1169 ntBASIC4.72□□□□□ -1.65
GFRA1P56159 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC4.72□□□□□ -1.65
GFRA1P56159 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC4.72□□□□□ -1.65
GFRA1P56159 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC4.72□□□□□ -1.65
GFRA1P56159 Y_RNA.632-201ENST00000459189 102 ntBASIC4.72□□□□□ -1.65
GFRA1P56159 RPL21P8-201ENST00000465083 535 ntBASIC4.72□□□□□ -1.65
GFRA1P56159 AC010631.1-201ENST00000474150 156 ntBASIC4.72□□□□□ -1.65
GFRA1P56159 RPSAP50-201ENST00000481955 852 ntBASIC4.72□□□□□ -1.65
GFRA1P56159 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC4.72□□□□□ -1.65
GFRA1P56159 MTCO1P29-201ENST00000496868 288 ntBASIC4.72□□□□□ -1.65
GFRA1P56159 ENSA-211ENST00000503345 793 ntTSL 3 BASIC4.72□□□□□ -1.65
GFRA1P56159 AC006427.1-201ENST00000514359 712 ntBASIC4.72□□□□□ -1.65
GFRA1P56159 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC4.72□□□□□ -1.65
GFRA1P56159 AC109635.4-202ENST00000531666 412 ntBASIC4.72□□□□□ -1.65
GFRA1P56159 APPL2-203ENST00000546731 684 ntTSL 2 BASIC4.72□□□□□ -1.65
GFRA1P56159 AC093012.1-202ENST00000549403 582 ntBASIC4.72□□□□□ -1.65
GFRA1P56159 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC4.72□□□□□ -1.65
GFRA1P56159 AC044860.2-201ENST00000561005 179 ntBASIC4.72□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 99.9 ms