Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 SNORD116-1-201ENST00000384335 95 ntBASIC4.43□□□□□ -1.7
NEK3P51956 HSPE1P26-201ENST00000405341 275 ntBASIC4.43□□□□□ -1.7
NEK3P51956 RPS23P10-201ENST00000416185 486 ntBASIC4.43□□□□□ -1.7
NEK3P51956 CYCSP46-201ENST00000423569 204 ntBASIC4.43□□□□□ -1.7
NEK3P51956 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC4.43□□□□□ -1.7
NEK3P51956 RSL24D1P6-201ENST00000426934 401 ntBASIC4.43□□□□□ -1.7
NEK3P51956 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC4.43□□□□□ -1.7
NEK3P51956 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC4.43□□□□□ -1.7
NEK3P51956 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC4.43□□□□□ -1.7
NEK3P51956 TRIM60P18-201ENST00000441518 828 ntBASIC4.43□□□□□ -1.7
NEK3P51956 GDI2P2-201ENST00000445131 608 ntBASIC4.43□□□□□ -1.7
NEK3P51956 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC4.43□□□□□ -1.7
NEK3P51956 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC4.43□□□□□ -1.7
NEK3P51956 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
NEK3P51956 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC4.43□□□□□ -1.7
NEK3P51956 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC4.43□□□□□ -1.7
NEK3P51956 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC4.43□□□□□ -1.7
NEK3P51956 AC010618.1-201ENST00000469924 477 ntBASIC4.43□□□□□ -1.7
NEK3P51956 TMED11P-201ENST00000479478 690 ntBASIC4.43□□□□□ -1.7
NEK3P51956 ALDH7A1P3-201ENST00000492517 345 ntBASIC4.43□□□□□ -1.7
NEK3P51956 RPL23AP55-201ENST00000498163 452 ntBASIC4.43□□□□□ -1.7
NEK3P51956 AC025445.1-201ENST00000502728 300 ntBASIC4.43□□□□□ -1.7
NEK3P51956 IL7R-208ENST00000511982 612 ntTSL 2 BASIC4.43□□□□□ -1.7
NEK3P51956 AC026801.2-201ENST00000515352 425 ntBASIC4.43□□□□□ -1.7
NEK3P51956 RNU6-201P-201ENST00000517100 61 ntBASIC4.43□□□□□ -1.7
NEK3P51956 IGHV3-32-201ENST00000519182 355 ntBASIC4.43□□□□□ -1.7
NEK3P51956 IGKV2D-19-201ENST00000523346 262 ntBASIC4.43□□□□□ -1.7
NEK3P51956 AC105233.3-201ENST00000531125 744 ntBASIC4.43□□□□□ -1.7
NEK3P51956 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC4.43□□□□□ -1.7
NEK3P51956 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC4.43□□□□□ -1.7
NEK3P51956 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC4.43□□□□□ -1.7
NEK3P51956 MIR3939-201ENST00000582614 106 ntBASIC4.43□□□□□ -1.7
NEK3P51956 UBE2L4-201ENST00000587688 464 ntBASIC4.43□□□□□ -1.7
NEK3P51956 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC4.43□□□□□ -1.7
NEK3P51956 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC4.43□□□□□ -1.7
NEK3P51956 IPO5P1-202ENST00000600039 287 ntBASIC4.43□□□□□ -1.7
NEK3P51956 AP001429.1-201ENST00000602568 530 ntBASIC4.43□□□□□ -1.7
NEK3P51956 AL359999.1-201ENST00000604513 294 ntBASIC4.43□□□□□ -1.7
NEK3P51956 AC012443.1-201ENST00000605605 231 ntBASIC4.43□□□□□ -1.7
NEK3P51956 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC4.43□□□□□ -1.7
NEK3P51956 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC4.43□□□□□ -1.7
NEK3P51956 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC4.43□□□□□ -1.7
NEK3P51956 Z69908.1-201ENST00000622603 247 ntBASIC4.43□□□□□ -1.7
NEK3P51956 AL158801.5-201ENST00000623123 465 ntBASIC4.43□□□□□ -1.7
NEK3P51956 AC067931.1-201ENST00000624190 671 ntBASIC4.43□□□□□ -1.7
NEK3P51956 AC140479.6-201ENST00000633535 357 ntBASIC4.43□□□□□ -1.7
NEK3P51956 AC092125.1-201ENST00000562568 1995 ntBASIC4.43□□□□□ -1.7
NEK3P51956 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC4.42□□□□□ -1.7
NEK3P51956 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC4.42□□□□□ -1.7
NEK3P51956 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
NEK3P51956 AL121657.1-201ENST00000327215 531 ntBASIC4.42□□□□□ -1.7
NEK3P51956 RNU6-223P-201ENST00000362830 107 ntBASIC4.42□□□□□ -1.7
NEK3P51956 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC4.42□□□□□ -1.7
NEK3P51956 RNU6-637P-201ENST00000384050 107 ntBASIC4.42□□□□□ -1.7
NEK3P51956 Y_RNA.548-201ENST00000384656 105 ntBASIC4.42□□□□□ -1.7
NEK3P51956 RNU6-754P-201ENST00000391166 107 ntBASIC4.42□□□□□ -1.7
NEK3P51956 SNORA11F-201ENST00000408237 128 ntBASIC4.42□□□□□ -1.7
NEK3P51956 MIR1911-201ENST00000410783 80 ntBASIC4.42□□□□□ -1.7
NEK3P51956 RPS20P14-201ENST00000412545 360 ntBASIC4.42□□□□□ -1.7
NEK3P51956 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC4.42□□□□□ -1.7
NEK3P51956 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC4.42□□□□□ -1.7
NEK3P51956 AC233728.2-201ENST00000425348 757 ntBASIC4.42□□□□□ -1.7
NEK3P51956 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
NEK3P51956 GAS5-208ENST00000425771 242 ntTSL 3 BASIC4.42□□□□□ -1.7
NEK3P51956 THAP5P1-201ENST00000439089 262 ntBASIC4.42□□□□□ -1.7
NEK3P51956 RPL21P133-201ENST00000443666 476 ntBASIC4.42□□□□□ -1.7
NEK3P51956 COX6CP12-201ENST00000446748 202 ntBASIC4.42□□□□□ -1.7
NEK3P51956 EPS15P1-201ENST00000448836 336 ntBASIC4.42□□□□□ -1.7
NEK3P51956 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC4.42□□□□□ -1.7
NEK3P51956 MTCO1P42-201ENST00000457379 726 ntBASIC4.42□□□□□ -1.7
NEK3P51956 RNA5SP269-201ENST00000459032 137 ntBASIC4.42□□□□□ -1.7
NEK3P51956 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
NEK3P51956 AC092451.1-201ENST00000480211 153 ntBASIC4.42□□□□□ -1.7
NEK3P51956 AC068587.1-201ENST00000483613 781 ntBASIC4.42□□□□□ -1.7
NEK3P51956 RPL7P24-201ENST00000493052 752 ntBASIC4.42□□□□□ -1.7
NEK3P51956 AC104164.2-201ENST00000496953 495 ntBASIC4.42□□□□□ -1.7
NEK3P51956 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
NEK3P51956 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC4.42□□□□□ -1.7
NEK3P51956 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC4.42□□□□□ -1.7
NEK3P51956 RN7SKP244-201ENST00000516513 307 ntBASIC4.42□□□□□ -1.7
NEK3P51956 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC4.42□□□□□ -1.7
NEK3P51956 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC4.42□□□□□ -1.7
NEK3P51956 PHBP17-201ENST00000528576 541 ntBASIC4.42□□□□□ -1.7
NEK3P51956 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC4.42□□□□□ -1.7
NEK3P51956 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
NEK3P51956 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC4.42□□□□□ -1.7
NEK3P51956 MEG8-218ENST00000556720 456 ntTSL 3 BASIC4.42□□□□□ -1.7
NEK3P51956 ABBA01006766.1-201ENST00000584728 294 ntBASIC4.42□□□□□ -1.7
NEK3P51956 MIR3138-201ENST00000585238 82 ntBASIC4.42□□□□□ -1.7
NEK3P51956 NBR2-204ENST00000587322 63 ntBASIC4.42□□□□□ -1.7
NEK3P51956 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC4.42□□□□□ -1.7
NEK3P51956 AC068790.5-201ENST00000602741 355 ntBASIC4.42□□□□□ -1.7
NEK3P51956 ARF4P1-201ENST00000605447 541 ntBASIC4.42□□□□□ -1.7
NEK3P51956 MIR432-201ENST00000606207 94 ntBASIC4.42□□□□□ -1.7
NEK3P51956 OR2AS2P-201ENST00000606902 342 ntBASIC4.42□□□□□ -1.7
NEK3P51956 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC4.42□□□□□ -1.7
NEK3P51956 AC073114.1-201ENST00000612027 490 ntBASIC4.42□□□□□ -1.7
NEK3P51956 RMST_9.1-201ENST00000619945 193 ntBASIC4.42□□□□□ -1.7
NEK3P51956 AC025048.6-202ENST00000627667 438 ntBASIC4.42□□□□□ -1.7
NEK3P51956 OR52H1-202ENST00000641796 1061 ntBASIC4.42□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 187.9 ms