Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 AL136380.1-201ENST00000447970 162 ntBASIC3.89□□□□□ -1.79
SOX2P48431 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
SOX2P48431 AC104308.1-201ENST00000454621 333 ntBASIC3.89□□□□□ -1.79
SOX2P48431 AC133473.1-201ENST00000455173 299 ntBASIC3.89□□□□□ -1.79
SOX2P48431 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC3.89□□□□□ -1.79
SOX2P48431 AC079804.1-201ENST00000461922 436 ntBASIC3.89□□□□□ -1.79
SOX2P48431 RPS27AP17-201ENST00000463344 455 ntBASIC3.89□□□□□ -1.79
SOX2P48431 AC006967.1-201ENST00000467608 589 ntBASIC3.89□□□□□ -1.79
SOX2P48431 RPS3AP14-201ENST00000483907 780 ntBASIC3.89□□□□□ -1.79
SOX2P48431 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC3.89□□□□□ -1.79
SOX2P48431 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC3.89□□□□□ -1.79
SOX2P48431 ARL2BPP6-201ENST00000512757 439 ntBASIC3.89□□□□□ -1.79
SOX2P48431 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC3.89□□□□□ -1.79
SOX2P48431 RNA5SP154-201ENST00000516193 111 ntBASIC3.89□□□□□ -1.79
SOX2P48431 RNA5SP34-201ENST00000516887 130 ntBASIC3.89□□□□□ -1.79
SOX2P48431 AP003497.1-201ENST00000528472 562 ntBASIC3.89□□□□□ -1.79
SOX2P48431 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC3.89□□□□□ -1.79
SOX2P48431 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
SOX2P48431 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC3.89□□□□□ -1.79
SOX2P48431 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC3.89□□□□□ -1.79
SOX2P48431 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC3.89□□□□□ -1.79
SOX2P48431 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC3.89□□□□□ -1.79
SOX2P48431 AC107954.1-201ENST00000565906 727 ntBASIC3.89□□□□□ -1.79
SOX2P48431 CYP4A43P-201ENST00000568156 121 ntBASIC3.89□□□□□ -1.79
SOX2P48431 AC068135.2-201ENST00000569293 1028 ntBASIC3.89□□□□□ -1.79
SOX2P48431 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC3.89□□□□□ -1.79
SOX2P48431 MIR3118-1-201ENST00000581787 76 ntBASIC3.89□□□□□ -1.79
SOX2P48431 UBE2L4-201ENST00000587688 464 ntBASIC3.89□□□□□ -1.79
SOX2P48431 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC3.89□□□□□ -1.79
SOX2P48431 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC3.89□□□□□ -1.79
SOX2P48431 AC073091.2-201ENST00000603205 907 ntBASIC3.89□□□□□ -1.79
SOX2P48431 AP003117.2-201ENST00000606010 545 ntBASIC3.89□□□□□ -1.79
SOX2P48431 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC3.89□□□□□ -1.79
SOX2P48431 RDM1-219ENST00000615378 542 ntTSL 3 BASIC3.89□□□□□ -1.79
SOX2P48431 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC3.89□□□□□ -1.79
SOX2P48431 MIR6886-201ENST00000619864 61 ntBASIC3.89□□□□□ -1.79
SOX2P48431 AL158801.5-201ENST00000623123 465 ntBASIC3.89□□□□□ -1.79
SOX2P48431 AC040168.1-201ENST00000623594 991 ntBASIC3.89□□□□□ -1.79
SOX2P48431 AC091953.2-201ENST00000623979 160 ntBASIC3.89□□□□□ -1.79
SOX2P48431 AP000843.1-201ENST00000624880 701 ntBASIC3.89□□□□□ -1.79
SOX2P48431 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC3.89□□□□□ -1.79
SOX2P48431 LRRC77P-213ENST00000637727 880 ntBASIC3.89□□□□□ -1.79
SOX2P48431 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
SOX2P48431 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC3.89□□□□□ -1.79
SOX2P48431 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC3.89□□□□□ -1.79
SOX2P48431 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
SOX2P48431 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
SOX2P48431 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC3.89□□□□□ -1.79
SOX2P48431 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
SOX2P48431 LINC00622-201ENST00000562811 1570 ntBASIC3.89□□□□□ -1.79
SOX2P48431 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC3.88□□□□□ -1.79
SOX2P48431 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC3.88□□□□□ -1.79
SOX2P48431 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC3.88□□□□□ -1.79
SOX2P48431 CPHL1P-201ENST00000461341 3407 ntBASIC3.88□□□□□ -1.79
SOX2P48431 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
SOX2P48431 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
SOX2P48431 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC3.88□□□□□ -1.79
SOX2P48431 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC3.88□□□□□ -1.79
SOX2P48431 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC3.88□□□□□ -1.79
SOX2P48431 AL590240.1-201ENST00000334118 313 ntBASIC3.88□□□□□ -1.79
SOX2P48431 Y_RNA.450-201ENST00000384198 113 ntBASIC3.88□□□□□ -1.79
SOX2P48431 Y_RNA.493-201ENST00000384422 102 ntBASIC3.88□□□□□ -1.79
SOX2P48431 CALM2P3-201ENST00000400429 449 ntBASIC3.88□□□□□ -1.79
SOX2P48431 RPL23AP48-201ENST00000406913 488 ntBASIC3.88□□□□□ -1.79
SOX2P48431 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC3.88□□□□□ -1.79
SOX2P48431 RN7SKP229-201ENST00000410465 302 ntBASIC3.88□□□□□ -1.79
SOX2P48431 RNA5SP113-201ENST00000410486 84 ntBASIC3.88□□□□□ -1.79
SOX2P48431 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC3.88□□□□□ -1.79
SOX2P48431 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC3.88□□□□□ -1.79
SOX2P48431 COX6B1P1-201ENST00000415962 213 ntBASIC3.88□□□□□ -1.79
SOX2P48431 AC245052.5-201ENST00000416320 649 ntBASIC3.88□□□□□ -1.79
SOX2P48431 MAP1LC3BP1-201ENST00000417653 379 ntBASIC3.88□□□□□ -1.79
SOX2P48431 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC3.88□□□□□ -1.79
SOX2P48431 AC019097.1-201ENST00000424783 735 ntBASIC3.88□□□□□ -1.79
SOX2P48431 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC3.88□□□□□ -1.79
SOX2P48431 RPS27AP12-201ENST00000429552 465 ntBASIC3.88□□□□□ -1.79
SOX2P48431 AC000111.3-201ENST00000433478 193 ntBASIC3.88□□□□□ -1.79
SOX2P48431 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC3.88□□□□□ -1.79
SOX2P48431 AC005154.2-201ENST00000438110 379 ntBASIC3.88□□□□□ -1.79
SOX2P48431 AC122718.1-201ENST00000439448 744 ntBASIC3.88□□□□□ -1.79
SOX2P48431 FAM133DP-201ENST00000464802 691 ntBASIC3.88□□□□□ -1.79
SOX2P48431 AC053481.1-201ENST00000467217 306 ntBASIC3.88□□□□□ -1.79
SOX2P48431 RPL31P58-201ENST00000469001 379 ntBASIC3.88□□□□□ -1.79
SOX2P48431 AC023598.1-201ENST00000472521 361 ntBASIC3.88□□□□□ -1.79
SOX2P48431 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC3.88□□□□□ -1.79
SOX2P48431 AC055855.1-201ENST00000489563 579 ntBASIC3.88□□□□□ -1.79
SOX2P48431 AC019235.1-201ENST00000503847 207 ntBASIC3.88□□□□□ -1.79
SOX2P48431 AC116353.2-201ENST00000505332 712 ntBASIC3.88□□□□□ -1.79
SOX2P48431 AC010587.1-201ENST00000505809 469 ntBASIC3.88□□□□□ -1.79
SOX2P48431 AC093824.1-201ENST00000508796 343 ntBASIC3.88□□□□□ -1.79
SOX2P48431 AC009646.1-201ENST00000510455 318 ntBASIC3.88□□□□□ -1.79
SOX2P48431 RNA5SP497-201ENST00000516081 97 ntBASIC3.88□□□□□ -1.79
SOX2P48431 RN7SKP116-201ENST00000516902 319 ntBASIC3.88□□□□□ -1.79
SOX2P48431 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC3.88□□□□□ -1.79
SOX2P48431 IFITM8P-201ENST00000522529 394 ntBASIC3.88□□□□□ -1.79
SOX2P48431 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC3.88□□□□□ -1.79
SOX2P48431 IGHVIII-67-4-201ENST00000524281 296 ntBASIC3.88□□□□□ -1.79
SOX2P48431 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC3.88□□□□□ -1.79
SOX2P48431 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC3.88□□□□□ -1.79
SOX2P48431 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC3.88□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms