Protein–RNA interactions for Protein: P43681

CHRNA4, Neuronal acetylcholine receptor subunit alpha-4, humanhuman

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4P43681 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC5.54□□□□□ -1.52
CHRNA4P43681 AL512782.1-201ENST00000603093 364 ntBASIC5.54□□□□□ -1.52
CHRNA4P43681 AC010900.2-201ENST00000604508 210 ntBASIC5.54□□□□□ -1.52
CHRNA4P43681 AL139124.1-201ENST00000609123 421 ntBASIC5.54□□□□□ -1.52
CHRNA4P43681 AP001486.3-201ENST00000615334 372 ntBASIC5.54□□□□□ -1.52
CHRNA4P43681 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC5.54□□□□□ -1.52
CHRNA4P43681 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CHRNA4P43681 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CHRNA4P43681 AL121839.2-201ENST00000565058 6943 ntBASIC5.54□□□□□ -1.52
CHRNA4P43681 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC5.54□□□□□ -1.52
CHRNA4P43681 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
CHRNA4P43681 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CHRNA4P43681 Z95114.1-201ENST00000624264 14574 ntBASIC5.54□□□□□ -1.52
CHRNA4P43681 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC5.54□□□□□ -1.52
CHRNA4P43681 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
CHRNA4P43681 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC5.54□□□□□ -1.52
CHRNA4P43681 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
CHRNA4P43681 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
CHRNA4P43681 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CHRNA4P43681 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CHRNA4P43681 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC5.53□□□□□ -1.52
CHRNA4P43681 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC5.53□□□□□ -1.52
CHRNA4P43681 AC108751.5-201ENST00000492880 1336 ntBASIC5.53□□□□□ -1.52
CHRNA4P43681 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CHRNA4P43681 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CHRNA4P43681 AC004656.1-201ENST00000568479 4951 ntBASIC5.53□□□□□ -1.52
CHRNA4P43681 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CHRNA4P43681 Y_RNA.170-201ENST00000363746 110 ntBASIC5.53□□□□□ -1.52
CHRNA4P43681 SNORD56.6-201ENST00000384569 71 ntBASIC5.53□□□□□ -1.52
CHRNA4P43681 SNORA41-201ENST00000384675 132 ntBASIC5.53□□□□□ -1.52
CHRNA4P43681 MIR551A-201ENST00000385042 96 ntBASIC5.53□□□□□ -1.52
CHRNA4P43681 AL136131.1-201ENST00000406079 803 ntBASIC5.53□□□□□ -1.52
CHRNA4P43681 RN7SKP286-201ENST00000410894 299 ntBASIC5.53□□□□□ -1.52
CHRNA4P43681 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC5.53□□□□□ -1.52
CHRNA4P43681 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
CHRNA4P43681 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC5.53□□□□□ -1.52
CHRNA4P43681 CYCSP51-201ENST00000443545 318 ntBASIC5.53□□□□□ -1.52
CHRNA4P43681 LAMTOR5P1-201ENST00000444290 270 ntBASIC5.53□□□□□ -1.52
CHRNA4P43681 RPL36AP15-201ENST00000444514 266 ntBASIC5.53□□□□□ -1.52
CHRNA4P43681 MTND6P5-201ENST00000448266 512 ntBASIC5.53□□□□□ -1.52
CHRNA4P43681 Y_RNA.644-201ENST00000459006 113 ntBASIC5.53□□□□□ -1.52
CHRNA4P43681 PABPC1P3-201ENST00000469174 459 ntBASIC5.53□□□□□ -1.52
CHRNA4P43681 AC091912.1-201ENST00000511351 248 ntBASIC5.53□□□□□ -1.52
CHRNA4P43681 RNU6-189P-201ENST00000516120 101 ntBASIC5.53□□□□□ -1.52
CHRNA4P43681 Y_RNA.674-201ENST00000516362 113 ntBASIC5.53□□□□□ -1.52
CHRNA4P43681 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CHRNA4P43681 AC109329.1-201ENST00000518744 317 ntBASIC5.53□□□□□ -1.52
CHRNA4P43681 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC5.53□□□□□ -1.52
CHRNA4P43681 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC5.53□□□□□ -1.52
CHRNA4P43681 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC5.53□□□□□ -1.52
CHRNA4P43681 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC5.53□□□□□ -1.52
CHRNA4P43681 MIR1273E-201ENST00000581165 102 ntBASIC5.53□□□□□ -1.52
CHRNA4P43681 MIR5188-201ENST00000583467 113 ntBASIC5.53□□□□□ -1.52
CHRNA4P43681 AC005899.2-201ENST00000584353 90 ntBASIC5.53□□□□□ -1.52
CHRNA4P43681 AL353997.4-201ENST00000586196 166 ntBASIC5.53□□□□□ -1.52
CHRNA4P43681 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC5.53□□□□□ -1.52
CHRNA4P43681 FO393422.1-201ENST00000603908 708 ntBASIC5.53□□□□□ -1.52
CHRNA4P43681 AP001485.1-201ENST00000604799 199 ntBASIC5.53□□□□□ -1.52
CHRNA4P43681 IGLCOR22-2-201ENST00000605398 313 ntBASIC5.53□□□□□ -1.52
CHRNA4P43681 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CHRNA4P43681 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC5.53□□□□□ -1.52
CHRNA4P43681 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CHRNA4P43681 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
CHRNA4P43681 DDX18P3-201ENST00000404856 2007 ntBASIC5.53□□□□□ -1.52
CHRNA4P43681 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC5.53□□□□□ -1.52
CHRNA4P43681 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC5.53□□□□□ -1.52
CHRNA4P43681 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CHRNA4P43681 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CHRNA4P43681 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC5.53□□□□□ -1.52
CHRNA4P43681 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC5.53□□□□□ -1.52
CHRNA4P43681 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CHRNA4P43681 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CHRNA4P43681 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CHRNA4P43681 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC5.52□□□□□ -1.53
CHRNA4P43681 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CHRNA4P43681 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC5.52□□□□□ -1.53
CHRNA4P43681 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC5.52□□□□□ -1.53
CHRNA4P43681 DLD-204ENST00000437604 1859 ntTSL 2 BASIC5.52□□□□□ -1.53
CHRNA4P43681 AC016745.2-201ENST00000608834 3443 ntBASIC5.52□□□□□ -1.53
CHRNA4P43681 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
CHRNA4P43681 RMST-209ENST00000639542 3269 ntTSL 5 BASIC5.52□□□□□ -1.53
CHRNA4P43681 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC5.52□□□□□ -1.53
CHRNA4P43681 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CHRNA4P43681 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC5.52□□□□□ -1.53
CHRNA4P43681 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CHRNA4P43681 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC5.52□□□□□ -1.53
CHRNA4P43681 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
CHRNA4P43681 AL031679.1-201ENST00000400616 525 ntBASIC5.52□□□□□ -1.53
CHRNA4P43681 RPL12P34-201ENST00000424532 479 ntBASIC5.52□□□□□ -1.53
CHRNA4P43681 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC5.52□□□□□ -1.53
CHRNA4P43681 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC5.52□□□□□ -1.53
CHRNA4P43681 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC5.52□□□□□ -1.53
CHRNA4P43681 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC5.52□□□□□ -1.53
CHRNA4P43681 HIGD1AP11-201ENST00000438361 280 ntBASIC5.52□□□□□ -1.53
CHRNA4P43681 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC5.52□□□□□ -1.53
CHRNA4P43681 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC5.52□□□□□ -1.53
CHRNA4P43681 HMGB3P21-201ENST00000452483 547 ntBASIC5.52□□□□□ -1.53
CHRNA4P43681 AC011225.1-201ENST00000457751 369 ntBASIC5.52□□□□□ -1.53
CHRNA4P43681 SNORD5.1-201ENST00000458800 75 ntBASIC5.52□□□□□ -1.53
CHRNA4P43681 RPL21P93-201ENST00000480465 489 ntBASIC5.52□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms