Protein–RNA interactions for Protein: P43378

PTPN9, Tyrosine-protein phosphatase non-receptor type 9, humanhuman

Predictions only

Length 593 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9P43378 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC4.08□□□□□ -1.76
PTPN9P43378 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
PTPN9P43378 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC4.08□□□□□ -1.76
PTPN9P43378 AL353997.4-201ENST00000586196 166 ntBASIC4.08□□□□□ -1.76
PTPN9P43378 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC4.08□□□□□ -1.76
PTPN9P43378 VN1R79P-201ENST00000593540 513 ntBASIC4.08□□□□□ -1.76
PTPN9P43378 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC4.08□□□□□ -1.76
PTPN9P43378 AL592436.1-201ENST00000605135 558 ntBASIC4.08□□□□□ -1.76
PTPN9P43378 AL031775.1-201ENST00000607014 887 ntBASIC4.08□□□□□ -1.76
PTPN9P43378 AC107214.2-201ENST00000608204 634 ntBASIC4.08□□□□□ -1.76
PTPN9P43378 MIR6798-201ENST00000612887 67 ntBASIC4.08□□□□□ -1.76
PTPN9P43378 AC073968.1-201ENST00000618594 637 ntBASIC4.08□□□□□ -1.76
PTPN9P43378 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC4.08□□□□□ -1.76
PTPN9P43378 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC4.08□□□□□ -1.76
PTPN9P43378 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC4.08□□□□□ -1.76
PTPN9P43378 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC4.08□□□□□ -1.76
PTPN9P43378 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
PTPN9P43378 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
PTPN9P43378 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC4.07□□□□□ -1.76
PTPN9P43378 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
PTPN9P43378 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
PTPN9P43378 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC4.07□□□□□ -1.76
PTPN9P43378 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC4.07□□□□□ -1.76
PTPN9P43378 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC4.07□□□□□ -1.76
PTPN9P43378 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC4.07□□□□□ -1.76
PTPN9P43378 AC007685.1-201ENST00000329806 452 ntBASIC4.07□□□□□ -1.76
PTPN9P43378 MTND4LP20-201ENST00000402379 270 ntBASIC4.07□□□□□ -1.76
PTPN9P43378 PPIAP31-201ENST00000405422 495 ntBASIC4.07□□□□□ -1.76
PTPN9P43378 MIR320C1-201ENST00000408566 88 ntBASIC4.07□□□□□ -1.76
PTPN9P43378 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC4.07□□□□□ -1.76
PTPN9P43378 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
PTPN9P43378 MTATP6P27-201ENST00000416987 621 ntBASIC4.07□□□□□ -1.76
PTPN9P43378 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC4.07□□□□□ -1.76
PTPN9P43378 GLRXP1-201ENST00000423261 334 ntBASIC4.07□□□□□ -1.76
PTPN9P43378 CYCSP46-201ENST00000423569 204 ntBASIC4.07□□□□□ -1.76
PTPN9P43378 EZH2P1-201ENST00000431167 291 ntBASIC4.07□□□□□ -1.76
PTPN9P43378 AC010153.1-201ENST00000432862 727 ntBASIC4.07□□□□□ -1.76
PTPN9P43378 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC4.07□□□□□ -1.76
PTPN9P43378 LARP1BP3-201ENST00000437229 869 ntBASIC4.07□□□□□ -1.76
PTPN9P43378 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC4.07□□□□□ -1.76
PTPN9P43378 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC4.07□□□□□ -1.76
PTPN9P43378 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC4.07□□□□□ -1.76
PTPN9P43378 Y_RNA.695-201ENST00000516715 107 ntBASIC4.07□□□□□ -1.76
PTPN9P43378 MIR2116-201ENST00000517221 80 ntBASIC4.07□□□□□ -1.76
PTPN9P43378 IGKV2D-23-201ENST00000518179 286 ntBASIC4.07□□□□□ -1.76
PTPN9P43378 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC4.07□□□□□ -1.76
PTPN9P43378 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC4.07□□□□□ -1.76
PTPN9P43378 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC4.07□□□□□ -1.76
PTPN9P43378 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC4.07□□□□□ -1.76
PTPN9P43378 OR5AP1P-201ENST00000529730 940 ntBASIC4.07□□□□□ -1.76
PTPN9P43378 AP004247.1-201ENST00000531556 1289 ntBASIC4.07□□□□□ -1.76
PTPN9P43378 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC4.07□□□□□ -1.76
PTPN9P43378 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC4.07□□□□□ -1.76
PTPN9P43378 AC007115.1-201ENST00000546853 234 ntBASIC4.07□□□□□ -1.76
PTPN9P43378 CBX3P5-201ENST00000552017 521 ntBASIC4.07□□□□□ -1.76
PTPN9P43378 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC4.07□□□□□ -1.76
PTPN9P43378 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC4.07□□□□□ -1.76
PTPN9P43378 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC4.07□□□□□ -1.76
PTPN9P43378 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC4.07□□□□□ -1.76
PTPN9P43378 MIR4644-201ENST00000579929 84 ntBASIC4.07□□□□□ -1.76
PTPN9P43378 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC4.07□□□□□ -1.76
PTPN9P43378 AP000403.1-201ENST00000603349 851 ntBASIC4.07□□□□□ -1.76
PTPN9P43378 AC025588.3-201ENST00000604182 274 ntBASIC4.07□□□□□ -1.76
PTPN9P43378 AC110741.2-201ENST00000605278 268 ntBASIC4.07□□□□□ -1.76
PTPN9P43378 ZYXP1-201ENST00000617638 118 ntBASIC4.07□□□□□ -1.76
PTPN9P43378 AC103858.2-201ENST00000621471 543 ntBASIC4.07□□□□□ -1.76
PTPN9P43378 MIR6500-201ENST00000622700 86 ntBASIC4.07□□□□□ -1.76
PTPN9P43378 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC4.07□□□□□ -1.76
PTPN9P43378 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC4.07□□□□□ -1.76
PTPN9P43378 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
PTPN9P43378 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC4.07□□□□□ -1.76
PTPN9P43378 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC4.07□□□□□ -1.76
PTPN9P43378 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC4.07□□□□□ -1.76
PTPN9P43378 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC4.07□□□□□ -1.76
PTPN9P43378 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
PTPN9P43378 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC4.06□□□□□ -1.76
PTPN9P43378 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
PTPN9P43378 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC4.06□□□□□ -1.76
PTPN9P43378 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
PTPN9P43378 RN7SKP227-201ENST00000364445 330 ntBASIC4.06□□□□□ -1.76
PTPN9P43378 RNU6-213P-201ENST00000384051 104 ntBASIC4.06□□□□□ -1.76
PTPN9P43378 RNU6-339P-201ENST00000384310 107 ntBASIC4.06□□□□□ -1.76
PTPN9P43378 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC4.06□□□□□ -1.76
PTPN9P43378 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC4.06□□□□□ -1.76
PTPN9P43378 OR8F1P-201ENST00000425243 930 ntBASIC4.06□□□□□ -1.76
PTPN9P43378 AC004975.1-201ENST00000428733 208 ntBASIC4.06□□□□□ -1.76
PTPN9P43378 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC4.06□□□□□ -1.76
PTPN9P43378 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC4.06□□□□□ -1.76
PTPN9P43378 AL117351.1-201ENST00000438864 766 ntBASIC4.06□□□□□ -1.76
PTPN9P43378 AC127537.2-201ENST00000439258 465 ntBASIC4.06□□□□□ -1.76
PTPN9P43378 AL356535.1-201ENST00000440335 398 ntBASIC4.06□□□□□ -1.76
PTPN9P43378 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC4.06□□□□□ -1.76
PTPN9P43378 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC4.06□□□□□ -1.76
PTPN9P43378 NUTF2P7-201ENST00000453086 375 ntBASIC4.06□□□□□ -1.76
PTPN9P43378 RNA5SP269-201ENST00000459032 137 ntBASIC4.06□□□□□ -1.76
PTPN9P43378 PPIAP15-201ENST00000479662 484 ntBASIC4.06□□□□□ -1.76
PTPN9P43378 AC068587.1-201ENST00000483613 781 ntBASIC4.06□□□□□ -1.76
PTPN9P43378 AC093267.1-201ENST00000489176 961 ntBASIC4.06□□□□□ -1.76
PTPN9P43378 MTCO3P7-201ENST00000510008 774 ntBASIC4.06□□□□□ -1.76
PTPN9P43378 AC005798.1-201ENST00000513715 387 ntBASIC4.06□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 655.7 ms