Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC3.36□□□□□ -1.87
SSR1P43307 MTND3P24-201ENST00000506306 329 ntBASIC3.36□□□□□ -1.87
SSR1P43307 PRELID3BP4-201ENST00000515476 571 ntBASIC3.36□□□□□ -1.87
SSR1P43307 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC3.36□□□□□ -1.87
SSR1P43307 AC087272.1-201ENST00000523624 533 ntBASIC3.36□□□□□ -1.87
SSR1P43307 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC3.36□□□□□ -1.87
SSR1P43307 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
SSR1P43307 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC3.36□□□□□ -1.87
SSR1P43307 AC128657.1-201ENST00000549459 145 ntBASIC3.36□□□□□ -1.87
SSR1P43307 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.36□□□□□ -1.87
SSR1P43307 SNORD39.3-201ENST00000584451 71 ntBASIC3.36□□□□□ -1.87
SSR1P43307 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC3.36□□□□□ -1.87
SSR1P43307 XIAPP1-201ENST00000603162 600 ntBASIC3.36□□□□□ -1.87
SSR1P43307 NUTF2P8-201ENST00000604593 363 ntBASIC3.36□□□□□ -1.87
SSR1P43307 AP004247.3-201ENST00000608682 624 ntBASIC3.36□□□□□ -1.87
SSR1P43307 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC3.36□□□□□ -1.87
SSR1P43307 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC3.36□□□□□ -1.87
SSR1P43307 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
SSR1P43307 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
SSR1P43307 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.36□□□□□ -1.87
SSR1P43307 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC3.35□□□□□ -1.87
SSR1P43307 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC3.35□□□□□ -1.87
SSR1P43307 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
SSR1P43307 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
SSR1P43307 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
SSR1P43307 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
SSR1P43307 OR1L1-202ENST00000373686 1083 ntBASIC3.35□□□□□ -1.87
SSR1P43307 AC234772.1-201ENST00000377927 937 ntBASIC3.35□□□□□ -1.87
SSR1P43307 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC3.35□□□□□ -1.87
SSR1P43307 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC3.35□□□□□ -1.87
SSR1P43307 OFD1P1Y-201ENST00000411756 1225 ntBASIC3.35□□□□□ -1.87
SSR1P43307 TAF13P2-201ENST00000416876 286 ntBASIC3.35□□□□□ -1.87
SSR1P43307 RPS3AP9-201ENST00000417027 792 ntBASIC3.35□□□□□ -1.87
SSR1P43307 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC3.35□□□□□ -1.87
SSR1P43307 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
SSR1P43307 AC005019.1-201ENST00000436455 431 ntBASIC3.35□□□□□ -1.87
SSR1P43307 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC3.35□□□□□ -1.87
SSR1P43307 LAMTOR5P1-201ENST00000444290 270 ntBASIC3.35□□□□□ -1.87
SSR1P43307 AC234775.1-201ENST00000454247 670 ntBASIC3.35□□□□□ -1.87
SSR1P43307 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC3.35□□□□□ -1.87
SSR1P43307 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC3.35□□□□□ -1.87
SSR1P43307 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC3.35□□□□□ -1.87
SSR1P43307 RNU6-826P-201ENST00000516827 104 ntBASIC3.35□□□□□ -1.87
SSR1P43307 OR8K2P-201ENST00000524645 927 ntBASIC3.35□□□□□ -1.87
SSR1P43307 AC011611.5-201ENST00000552477 578 ntBASIC3.35□□□□□ -1.87
SSR1P43307 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC3.35□□□□□ -1.87
SSR1P43307 RN7SL339P-201ENST00000580597 296 ntBASIC3.35□□□□□ -1.87
SSR1P43307 ZNF415P1-201ENST00000582279 1166 ntBASIC3.35□□□□□ -1.87
SSR1P43307 MIR3158-1-201ENST00000583596 81 ntBASIC3.35□□□□□ -1.87
SSR1P43307 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC3.35□□□□□ -1.87
SSR1P43307 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC3.35□□□□□ -1.87
SSR1P43307 AC013468.1-201ENST00000608680 598 ntBASIC3.35□□□□□ -1.87
SSR1P43307 uc_338.25-201ENST00000613756 156 ntBASIC3.35□□□□□ -1.87
SSR1P43307 AC006133.1-201ENST00000617106 264 ntBASIC3.35□□□□□ -1.87
SSR1P43307 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC3.35□□□□□ -1.87
SSR1P43307 MTCO1P6-201ENST00000481192 1384 ntBASIC3.35□□□□□ -1.87
SSR1P43307 MTND5P24-201ENST00000438892 1767 ntBASIC3.35□□□□□ -1.87
SSR1P43307 AL161912.2-201ENST00000565707 3007 ntBASIC3.35□□□□□ -1.87
SSR1P43307 AC099654.7-201ENST00000635788 2127 ntBASIC3.34□□□□□ -1.87
SSR1P43307 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.87
SSR1P43307 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
SSR1P43307 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
SSR1P43307 AL139095.1-201ENST00000404326 391 ntBASIC3.34□□□□□ -1.87
SSR1P43307 FNDC3CP-201ENST00000420795 1155 ntBASIC3.34□□□□□ -1.87
SSR1P43307 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
SSR1P43307 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.34□□□□□ -1.87
SSR1P43307 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC3.34□□□□□ -1.87
SSR1P43307 AC079780.1-201ENST00000428259 207 ntBASIC3.34□□□□□ -1.87
SSR1P43307 RPL17P35-201ENST00000432217 549 ntBASIC3.34□□□□□ -1.87
SSR1P43307 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC3.34□□□□□ -1.87
SSR1P43307 AC234064.1-201ENST00000436312 247 ntBASIC3.34□□□□□ -1.87
SSR1P43307 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC3.34□□□□□ -1.87
SSR1P43307 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC3.34□□□□□ -1.87
SSR1P43307 AC104073.1-201ENST00000451988 151 ntBASIC3.34□□□□□ -1.87
SSR1P43307 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
SSR1P43307 XACT-201ENST00000468762 497 ntTSL 5 BASIC3.34□□□□□ -1.87
SSR1P43307 ST13P14-201ENST00000474095 734 ntBASIC3.34□□□□□ -1.87
SSR1P43307 RPL21P13-201ENST00000488305 481 ntBASIC3.34□□□□□ -1.87
SSR1P43307 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC3.34□□□□□ -1.87
SSR1P43307 AC112518.2-201ENST00000508565 425 ntBASIC3.34□□□□□ -1.87
SSR1P43307 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC3.34□□□□□ -1.87
SSR1P43307 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC3.34□□□□□ -1.87
SSR1P43307 RNU6-334P-201ENST00000517072 102 ntBASIC3.34□□□□□ -1.87
SSR1P43307 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC3.34□□□□□ -1.87
SSR1P43307 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
SSR1P43307 LINC00911-201ENST00000555272 546 ntTSL 2 BASIC3.34□□□□□ -1.87
SSR1P43307 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.34□□□□□ -1.87
SSR1P43307 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC3.34□□□□□ -1.87
SSR1P43307 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC3.34□□□□□ -1.87
SSR1P43307 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.34□□□□□ -1.87
SSR1P43307 AL669831.4-202ENST00000590817 238 ntBASIC3.34□□□□□ -1.87
SSR1P43307 RPL23AP78-201ENST00000599928 470 ntBASIC3.34□□□□□ -1.87
SSR1P43307 AC073657.2-201ENST00000605661 303 ntBASIC3.34□□□□□ -1.87
SSR1P43307 SNHG22-203ENST00000617833 660 ntBASIC3.34□□□□□ -1.87
SSR1P43307 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC3.34□□□□□ -1.87
SSR1P43307 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC3.34□□□□□ -1.87
SSR1P43307 AL121594.5-201ENST00000631724 573 ntBASIC3.34□□□□□ -1.87
SSR1P43307 GABRG2-229ENST00000641017 3628 ntBASIC3.33□□□□□ -1.88
SSR1P43307 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC3.33□□□□□ -1.88
SSR1P43307 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC3.33□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms