Protein–RNA interactions for Protein: P41273

TNFSF9, Tumor necrosis factor ligand superfamily member 9, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9P41273 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
TNFSF9P41273 RPS7P2-201ENST00000435134 607 ntBASIC3.06□□□□□ -1.92
TNFSF9P41273 AL929288.2-201ENST00000446368 407 ntBASIC3.06□□□□□ -1.92
TNFSF9P41273 AC004924.1-201ENST00000480160 781 ntBASIC3.06□□□□□ -1.92
TNFSF9P41273 MTCO1P6-201ENST00000481192 1384 ntBASIC3.06□□□□□ -1.92
TNFSF9P41273 AL024509.2-201ENST00000493462 493 ntBASIC3.06□□□□□ -1.92
TNFSF9P41273 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC3.06□□□□□ -1.92
TNFSF9P41273 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
TNFSF9P41273 AC004062.1-201ENST00000509926 645 ntBASIC3.06□□□□□ -1.92
TNFSF9P41273 SETP12-201ENST00000514068 805 ntBASIC3.06□□□□□ -1.92
TNFSF9P41273 AC092593.1-201ENST00000515413 1815 ntBASIC3.06□□□□□ -1.92
TNFSF9P41273 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC3.06□□□□□ -1.92
TNFSF9P41273 AC027309.2-201ENST00000520566 192 ntBASIC3.06□□□□□ -1.92
TNFSF9P41273 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC3.06□□□□□ -1.92
TNFSF9P41273 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC3.06□□□□□ -1.92
TNFSF9P41273 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC3.06□□□□□ -1.92
TNFSF9P41273 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
TNFSF9P41273 OR4A45P-201ENST00000529954 901 ntBASIC3.06□□□□□ -1.92
TNFSF9P41273 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC3.06□□□□□ -1.92
TNFSF9P41273 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC3.06□□□□□ -1.92
TNFSF9P41273 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC3.06□□□□□ -1.92
TNFSF9P41273 AC027807.1-201ENST00000559921 996 ntBASIC3.06□□□□□ -1.92
TNFSF9P41273 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.06□□□□□ -1.92
TNFSF9P41273 VN1R90P-201ENST00000595717 726 ntBASIC3.06□□□□□ -1.92
TNFSF9P41273 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
TNFSF9P41273 AL020991.1-201ENST00000612314 373 ntBASIC3.06□□□□□ -1.92
TNFSF9P41273 AC107308.1-201ENST00000615897 301 ntBASIC3.06□□□□□ -1.92
TNFSF9P41273 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
TNFSF9P41273 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
TNFSF9P41273 MFSD8-213ENST00000641134 1327 ntBASIC3.06□□□□□ -1.92
TNFSF9P41273 OR5T1-202ENST00000641665 1471 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
TNFSF9P41273 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
TNFSF9P41273 MAPK6PS3-201ENST00000403865 2162 ntBASIC3.05□□□□□ -1.92
TNFSF9P41273 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
TNFSF9P41273 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
TNFSF9P41273 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC3.05□□□□□ -1.92
TNFSF9P41273 MTND4P34-201ENST00000572715 1371 ntBASIC3.05□□□□□ -1.92
TNFSF9P41273 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC3.05□□□□□ -1.92
TNFSF9P41273 AC091152.2-201ENST00000591628 2569 ntBASIC3.05□□□□□ -1.92
TNFSF9P41273 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.05□□□□□ -1.92
TNFSF9P41273 RNA5SP295-201ENST00000362655 121 ntBASIC3.05□□□□□ -1.92
TNFSF9P41273 RNU1-112P-201ENST00000364401 164 ntBASIC3.05□□□□□ -1.92
TNFSF9P41273 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC3.05□□□□□ -1.92
TNFSF9P41273 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC3.05□□□□□ -1.92
TNFSF9P41273 MIR591-201ENST00000385290 95 ntBASIC3.05□□□□□ -1.92
TNFSF9P41273 RNA5SP56-201ENST00000410277 118 ntBASIC3.05□□□□□ -1.92
TNFSF9P41273 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC3.05□□□□□ -1.92
TNFSF9P41273 RPS29P6-201ENST00000438196 145 ntBASIC3.05□□□□□ -1.92
TNFSF9P41273 AC105272.1-201ENST00000438604 198 ntBASIC3.05□□□□□ -1.92
TNFSF9P41273 RPS24P13-201ENST00000442520 397 ntBASIC3.05□□□□□ -1.92
TNFSF9P41273 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC3.05□□□□□ -1.92
TNFSF9P41273 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
TNFSF9P41273 NPM1P13-201ENST00000452663 865 ntBASIC3.05□□□□□ -1.92
TNFSF9P41273 AL049830.2-201ENST00000480072 201 ntBASIC3.05□□□□□ -1.92
TNFSF9P41273 MTCO3P35-201ENST00000485582 781 ntBASIC3.05□□□□□ -1.92
TNFSF9P41273 RNU6-1102P-201ENST00000516149 96 ntBASIC3.05□□□□□ -1.92
TNFSF9P41273 PTK2-220ENST00000520151 573 ntTSL 4 BASIC3.05□□□□□ -1.92
TNFSF9P41273 IGJP1-201ENST00000522682 475 ntBASIC3.05□□□□□ -1.92
TNFSF9P41273 SMILR-201ENST00000533992 553 ntTSL 4 BASIC3.05□□□□□ -1.92
TNFSF9P41273 AC010198.2-201ENST00000550612 259 ntBASIC3.05□□□□□ -1.92
TNFSF9P41273 GTF3AP2-201ENST00000557014 266 ntBASIC3.05□□□□□ -1.92
TNFSF9P41273 LINC00557-201ENST00000563184 1279 ntBASIC3.05□□□□□ -1.92
TNFSF9P41273 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.05□□□□□ -1.92
TNFSF9P41273 AC012182.1-201ENST00000570133 895 ntBASIC3.05□□□□□ -1.92
TNFSF9P41273 AC083760.1-201ENST00000589621 670 ntBASIC3.05□□□□□ -1.92
TNFSF9P41273 ZNF92P2-201ENST00000600543 1059 ntBASIC3.05□□□□□ -1.92
TNFSF9P41273 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC3.05□□□□□ -1.92
TNFSF9P41273 AC006213.5-201ENST00000619673 288 ntBASIC3.05□□□□□ -1.92
TNFSF9P41273 AC006963.1-201ENST00000624003 1052 ntBASIC3.05□□□□□ -1.92
TNFSF9P41273 AC020923.1-201ENST00000624021 917 ntBASIC3.05□□□□□ -1.92
TNFSF9P41273 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.05□□□□□ -1.92
TNFSF9P41273 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.04□□□□□ -1.92
TNFSF9P41273 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
TNFSF9P41273 RNU6-50P-201ENST00000362356 103 ntBASIC3.04□□□□□ -1.92
TNFSF9P41273 DEFB109C-201ENST00000382575 264 ntBASIC3.04□□□□□ -1.92
TNFSF9P41273 DEFB109B-201ENST00000382656 264 ntBASIC3.04□□□□□ -1.92
TNFSF9P41273 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
TNFSF9P41273 AL031121.1-201ENST00000406553 254 ntBASIC3.04□□□□□ -1.92
TNFSF9P41273 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.04□□□□□ -1.92
TNFSF9P41273 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC3.04□□□□□ -1.92
TNFSF9P41273 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.04□□□□□ -1.92
TNFSF9P41273 AC087499.2-201ENST00000432861 149 ntBASIC3.04□□□□□ -1.92
TNFSF9P41273 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC3.04□□□□□ -1.92
TNFSF9P41273 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.04□□□□□ -1.92
TNFSF9P41273 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC3.04□□□□□ -1.92
TNFSF9P41273 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC3.04□□□□□ -1.92
TNFSF9P41273 RPS24P6-201ENST00000452670 400 ntBASIC3.04□□□□□ -1.92
TNFSF9P41273 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC3.04□□□□□ -1.92
TNFSF9P41273 HMGN3P1-201ENST00000453847 193 ntBASIC3.04□□□□□ -1.92
TNFSF9P41273 AC003982.1-202ENST00000469928 248 ntBASIC3.04□□□□□ -1.92
TNFSF9P41273 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.04□□□□□ -1.92
TNFSF9P41273 OR52A4P-202ENST00000481634 799 ntBASIC3.04□□□□□ -1.92
TNFSF9P41273 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC3.04□□□□□ -1.92
TNFSF9P41273 VN1R104P-201ENST00000505115 1009 ntBASIC3.04□□□□□ -1.92
TNFSF9P41273 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC3.04□□□□□ -1.92
TNFSF9P41273 RNA5SP356-201ENST00000515972 94 ntBASIC3.04□□□□□ -1.92
TNFSF9P41273 RNU6-416P-201ENST00000516265 103 ntBASIC3.04□□□□□ -1.92
TNFSF9P41273 AC007333.2-201ENST00000569998 559 ntTSL 4 BASIC3.04□□□□□ -1.92
TNFSF9P41273 MIR3186-201ENST00000577404 85 ntBASIC3.04□□□□□ -1.92
TNFSF9P41273 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC3.04□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms