Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 RNU6-697P-201ENST00000363348 107 ntBASIC2.66□□□□□ -1.98
COL4A5P29400 SNORD21-201ENST00000383953 95 ntBASIC2.66□□□□□ -1.98
COL4A5P29400 MIR3074-201ENST00000384885 81 ntBASIC2.66□□□□□ -1.98
COL4A5P29400 AC098826.1-201ENST00000433943 471 ntBASIC2.66□□□□□ -1.98
COL4A5P29400 MTND2P2-201ENST00000434633 945 ntBASIC2.66□□□□□ -1.98
COL4A5P29400 AC004866.2-201ENST00000438285 481 ntBASIC2.66□□□□□ -1.98
COL4A5P29400 RPL23AP42-201ENST00000471152 471 ntBASIC2.66□□□□□ -1.98
COL4A5P29400 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC2.66□□□□□ -1.98
COL4A5P29400 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC2.66□□□□□ -1.98
COL4A5P29400 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC2.66□□□□□ -1.98
COL4A5P29400 AC245517.5-201ENST00000611529 162 ntBASIC2.66□□□□□ -1.98
COL4A5P29400 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC2.65□□□□□ -1.98
COL4A5P29400 AC011460.1-201ENST00000636268 1834 ntBASIC2.65□□□□□ -1.98
COL4A5P29400 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.65□□□□□ -1.98
COL4A5P29400 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC2.65□□□□□ -1.98
COL4A5P29400 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC2.65□□□□□ -1.99
COL4A5P29400 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
COL4A5P29400 TRGV6-201ENST00000417928 299 ntBASIC2.65□□□□□ -1.99
COL4A5P29400 RPS24P8-201ENST00000431490 402 ntBASIC2.65□□□□□ -1.99
COL4A5P29400 AC072039.1-201ENST00000477611 581 ntBASIC2.65□□□□□ -1.99
COL4A5P29400 CCNHP1-201ENST00000513311 678 ntBASIC2.65□□□□□ -1.99
COL4A5P29400 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC2.65□□□□□ -1.99
COL4A5P29400 OR8X1P-201ENST00000534542 869 ntBASIC2.65□□□□□ -1.99
COL4A5P29400 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC2.65□□□□□ -1.99
COL4A5P29400 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC2.65□□□□□ -1.99
COL4A5P29400 ISCA1P3-201ENST00000577104 373 ntBASIC2.65□□□□□ -1.99
COL4A5P29400 FAM106CP-201ENST00000582212 507 ntBASIC2.65□□□□□ -1.99
COL4A5P29400 AC011494.1-201ENST00000596454 237 ntBASIC2.65□□□□□ -1.99
COL4A5P29400 AL022099.1-201ENST00000604551 712 ntBASIC2.65□□□□□ -1.99
COL4A5P29400 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC2.65□□□□□ -1.99
COL4A5P29400 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC2.65□□□□□ -1.99
COL4A5P29400 AC095050.2-201ENST00000510748 1458 ntBASIC2.65□□□□□ -1.99
COL4A5P29400 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC2.64□□□□□ -1.99
COL4A5P29400 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
COL4A5P29400 Y_RNA.540-201ENST00000384638 111 ntBASIC2.64□□□□□ -1.99
COL4A5P29400 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC2.64□□□□□ -1.99
COL4A5P29400 TRAPPC2P10-201ENST00000415662 323 ntBASIC2.64□□□□□ -1.99
COL4A5P29400 SPA17P1-201ENST00000416656 452 ntBASIC2.64□□□□□ -1.99
COL4A5P29400 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC2.64□□□□□ -1.99
COL4A5P29400 AL353597.2-202ENST00000434901 373 ntBASIC2.64□□□□□ -1.99
COL4A5P29400 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
COL4A5P29400 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC2.64□□□□□ -1.99
COL4A5P29400 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC2.64□□□□□ -1.99
COL4A5P29400 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC2.64□□□□□ -1.99
COL4A5P29400 AC123786.2-201ENST00000603459 275 ntBASIC2.64□□□□□ -1.99
COL4A5P29400 AL451074.6-201ENST00000608512 729 ntBASIC2.64□□□□□ -1.99
COL4A5P29400 UBE2Q2P2-203ENST00000613592 761 ntBASIC2.64□□□□□ -1.99
COL4A5P29400 AC022336.2-201ENST00000568966 2538 ntBASIC2.64□□□□□ -1.99
COL4A5P29400 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
COL4A5P29400 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC2.64□□□□□ -1.99
COL4A5P29400 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC2.64□□□□□ -1.99
COL4A5P29400 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC2.64□□□□□ -1.99
COL4A5P29400 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
COL4A5P29400 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC2.63□□□□□ -1.99
COL4A5P29400 OR6C65-201ENST00000379665 1076 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
COL4A5P29400 SNORA11.4-201ENST00000408823 129 ntBASIC2.63□□□□□ -1.99
COL4A5P29400 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC2.63□□□□□ -1.99
COL4A5P29400 RNU6-603P-201ENST00000411403 107 ntBASIC2.63□□□□□ -1.99
COL4A5P29400 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC2.63□□□□□ -1.99
COL4A5P29400 AC244505.4-201ENST00000434905 287 ntBASIC2.63□□□□□ -1.99
COL4A5P29400 ELOCP10-201ENST00000440624 327 ntBASIC2.63□□□□□ -1.99
COL4A5P29400 SSXP5-201ENST00000443473 287 ntBASIC2.63□□□□□ -1.99
COL4A5P29400 AP000893.1-201ENST00000474462 794 ntBASIC2.63□□□□□ -1.99
COL4A5P29400 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
COL4A5P29400 AC091917.2-201ENST00000505002 744 ntBASIC2.63□□□□□ -1.99
COL4A5P29400 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC2.63□□□□□ -1.99
COL4A5P29400 AC117522.2-201ENST00000510049 657 ntBASIC2.63□□□□□ -1.99
COL4A5P29400 IGHVIII-38-1-201ENST00000521454 282 ntBASIC2.63□□□□□ -1.99
COL4A5P29400 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC2.63□□□□□ -1.99
COL4A5P29400 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
COL4A5P29400 NDUFA5P6-201ENST00000542110 379 ntBASIC2.63□□□□□ -1.99
COL4A5P29400 PDCD5P1-201ENST00000543528 309 ntBASIC2.63□□□□□ -1.99
COL4A5P29400 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC2.63□□□□□ -1.99
COL4A5P29400 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC2.63□□□□□ -1.99
COL4A5P29400 ELOCP34-201ENST00000604436 327 ntBASIC2.63□□□□□ -1.99
COL4A5P29400 AC007620.3-201ENST00000608131 497 ntBASIC2.63□□□□□ -1.99
COL4A5P29400 AL110115.1-201ENST00000614396 364 ntBASIC2.63□□□□□ -1.99
COL4A5P29400 AC009831.4-201ENST00000620744 325 ntBASIC2.63□□□□□ -1.99
COL4A5P29400 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
COL4A5P29400 ZNF355P-201ENST00000427301 3216 ntBASIC2.63□□□□□ -1.99
COL4A5P29400 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC2.63□□□□□ -1.99
COL4A5P29400 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC2.63□□□□□ -1.99
COL4A5P29400 Y_RNA.62-201ENST00000362840 99 ntBASIC2.63□□□□□ -1.99
COL4A5P29400 RNU6-225P-201ENST00000384613 103 ntBASIC2.63□□□□□ -1.99
COL4A5P29400 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
COL4A5P29400 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC2.63□□□□□ -1.99
COL4A5P29400 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC2.63□□□□□ -1.99
COL4A5P29400 AL159169.1-201ENST00000421119 127 ntBASIC2.63□□□□□ -1.99
COL4A5P29400 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC2.63□□□□□ -1.99
COL4A5P29400 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC2.63□□□□□ -1.99
COL4A5P29400 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC2.63□□□□□ -1.99
COL4A5P29400 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC2.63□□□□□ -1.99
COL4A5P29400 RPL38P4-201ENST00000502376 214 ntBASIC2.63□□□□□ -1.99
COL4A5P29400 OR4U1P-201ENST00000554958 912 ntBASIC2.63□□□□□ -1.99
COL4A5P29400 PSMG2-204ENST00000585331 983 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
COL4A5P29400 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
COL4A5P29400 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.63□□□□□ -1.99
COL4A5P29400 TMEM161BP1-201ENST00000457388 1457 ntBASIC2.63□□□□□ -1.99
COL4A5P29400 THUMPD3P1-201ENST00000506556 1480 ntBASIC2.63□□□□□ -1.99
COL4A5P29400 AK9-203ENST00000368948 2478 ntTSL 5 BASIC2.62□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 97.6 ms