Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC3.33□□□□□ -1.88
SHC1P29353 MTCO1P14-201ENST00000441695 1559 ntBASIC3.33□□□□□ -1.88
SHC1P29353 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.33□□□□□ -1.88
SHC1P29353 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
SHC1P29353 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
SHC1P29353 CD36-221ENST00000534394 1741 ntTSL 2 BASIC3.33□□□□□ -1.88
SHC1P29353 ZNF285B-201ENST00000561698 1767 ntBASIC3.33□□□□□ -1.88
SHC1P29353 PRO1804-201ENST00000623780 2050 ntBASIC3.32□□□□□ -1.88
SHC1P29353 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
SHC1P29353 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
SHC1P29353 RNU6-582P-201ENST00000362989 107 ntBASIC3.32□□□□□ -1.88
SHC1P29353 RNU5D-1-201ENST00000363299 116 ntBASIC3.32□□□□□ -1.88
SHC1P29353 SNORD116-23-201ENST00000384645 92 ntBASIC3.32□□□□□ -1.88
SHC1P29353 SNORA26.8-201ENST00000391306 124 ntBASIC3.32□□□□□ -1.88
SHC1P29353 AC004987.3-201ENST00000413879 771 ntBASIC3.32□□□□□ -1.88
SHC1P29353 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC3.32□□□□□ -1.88
SHC1P29353 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC3.32□□□□□ -1.88
SHC1P29353 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
SHC1P29353 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC3.32□□□□□ -1.88
SHC1P29353 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC3.32□□□□□ -1.88
SHC1P29353 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC3.32□□□□□ -1.88
SHC1P29353 AL353706.1-201ENST00000436728 494 ntBASIC3.32□□□□□ -1.88
SHC1P29353 RAB11AP1-201ENST00000442978 646 ntBASIC3.32□□□□□ -1.88
SHC1P29353 AC006480.1-201ENST00000449887 378 ntBASIC3.32□□□□□ -1.88
SHC1P29353 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.32□□□□□ -1.88
SHC1P29353 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
SHC1P29353 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC3.32□□□□□ -1.88
SHC1P29353 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC3.32□□□□□ -1.88
SHC1P29353 SNORD108-201ENST00000459332 71 ntBASIC3.32□□□□□ -1.88
SHC1P29353 MTND1P16-201ENST00000465177 898 ntBASIC3.32□□□□□ -1.88
SHC1P29353 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC3.32□□□□□ -1.88
SHC1P29353 RPL21P103-201ENST00000479921 488 ntBASIC3.32□□□□□ -1.88
SHC1P29353 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC3.32□□□□□ -1.88
SHC1P29353 AC012170.1-201ENST00000495139 359 ntBASIC3.32□□□□□ -1.88
SHC1P29353 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC3.32□□□□□ -1.88
SHC1P29353 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC3.32□□□□□ -1.88
SHC1P29353 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC3.32□□□□□ -1.88
SHC1P29353 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC3.32□□□□□ -1.88
SHC1P29353 MTND3P5-201ENST00000512798 333 ntBASIC3.32□□□□□ -1.88
SHC1P29353 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.32□□□□□ -1.88
SHC1P29353 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC3.32□□□□□ -1.88
SHC1P29353 RNA5SP135-201ENST00000517019 125 ntBASIC3.32□□□□□ -1.88
SHC1P29353 TRMT10BP1-201ENST00000519377 943 ntBASIC3.32□□□□□ -1.88
SHC1P29353 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC3.32□□□□□ -1.88
SHC1P29353 MED28P5-201ENST00000528254 438 ntBASIC3.32□□□□□ -1.88
SHC1P29353 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC3.32□□□□□ -1.88
SHC1P29353 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC3.32□□□□□ -1.88
SHC1P29353 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC3.32□□□□□ -1.88
SHC1P29353 AC006960.3-201ENST00000561845 705 ntBASIC3.32□□□□□ -1.88
SHC1P29353 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC3.32□□□□□ -1.88
SHC1P29353 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC3.32□□□□□ -1.88
SHC1P29353 MIR3186-201ENST00000577404 85 ntBASIC3.32□□□□□ -1.88
SHC1P29353 AC090312.2-201ENST00000582687 378 ntBASIC3.32□□□□□ -1.88
SHC1P29353 RSL24D1P11-201ENST00000591045 491 ntBASIC3.32□□□□□ -1.88
SHC1P29353 AC068790.6-201ENST00000602558 258 ntBASIC3.32□□□□□ -1.88
SHC1P29353 AL592295.2-201ENST00000612578 206 ntBASIC3.32□□□□□ -1.88
SHC1P29353 AL158063.1-201ENST00000615349 536 ntBASIC3.32□□□□□ -1.88
SHC1P29353 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC3.32□□□□□ -1.88
SHC1P29353 AL136981.2-201ENST00000617319 734 ntBASIC3.32□□□□□ -1.88
SHC1P29353 CR392039.5-201ENST00000623201 510 ntBASIC3.32□□□□□ -1.88
SHC1P29353 AC092184.1-201ENST00000625042 715 ntBASIC3.32□□□□□ -1.88
SHC1P29353 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC3.32□□□□□ -1.88
SHC1P29353 AC012442.3-202ENST00000636742 206 ntBASIC3.32□□□□□ -1.88
SHC1P29353 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC3.32□□□□□ -1.88
SHC1P29353 AC011477.1-204ENST00000623416 1325 ntBASIC3.32□□□□□ -1.88
SHC1P29353 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC3.32□□□□□ -1.88
SHC1P29353 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
SHC1P29353 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.32□□□□□ -1.88
SHC1P29353 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
SHC1P29353 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
SHC1P29353 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.31□□□□□ -1.88
SHC1P29353 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
SHC1P29353 AC066616.2-201ENST00000559334 1481 ntBASIC3.31□□□□□ -1.88
SHC1P29353 AL122126.1-201ENST00000546905 1318 ntBASIC3.31□□□□□ -1.88
SHC1P29353 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC3.31□□□□□ -1.88
SHC1P29353 RNU6-1066P-201ENST00000363573 105 ntBASIC3.31□□□□□ -1.88
SHC1P29353 SNORA73.2-201ENST00000364946 201 ntBASIC3.31□□□□□ -1.88
SHC1P29353 OR52E6-202ENST00000379946 954 ntBASIC3.31□□□□□ -1.88
SHC1P29353 AL133264.1-201ENST00000407157 562 ntBASIC3.31□□□□□ -1.88
SHC1P29353 RPL23AP47-201ENST00000408017 460 ntBASIC3.31□□□□□ -1.88
SHC1P29353 RNU6ATAC-201ENST00000408749 126 ntBASIC3.31□□□□□ -1.88
SHC1P29353 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC3.31□□□□□ -1.88
SHC1P29353 HMGB3P20-201ENST00000417997 600 ntBASIC3.31□□□□□ -1.88
SHC1P29353 AL035423.1-201ENST00000420331 213 ntBASIC3.31□□□□□ -1.88
SHC1P29353 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC3.31□□□□□ -1.88
SHC1P29353 AC006366.1-201ENST00000422002 759 ntBASIC3.31□□□□□ -1.88
SHC1P29353 AC007389.2-201ENST00000434630 306 ntBASIC3.31□□□□□ -1.88
SHC1P29353 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC3.31□□□□□ -1.88
SHC1P29353 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC3.31□□□□□ -1.88
SHC1P29353 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.31□□□□□ -1.88
SHC1P29353 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC3.31□□□□□ -1.88
SHC1P29353 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC3.31□□□□□ -1.88
SHC1P29353 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC3.31□□□□□ -1.88
SHC1P29353 MTND1P27-201ENST00000451117 902 ntBASIC3.31□□□□□ -1.88
SHC1P29353 MRPS31P2-201ENST00000451581 518 ntBASIC3.31□□□□□ -1.88
SHC1P29353 OR6C5P-201ENST00000452388 923 ntBASIC3.31□□□□□ -1.88
SHC1P29353 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC3.31□□□□□ -1.88
SHC1P29353 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC3.31□□□□□ -1.88
SHC1P29353 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC3.31□□□□□ -1.88
SHC1P29353 RPL7P47-201ENST00000497299 556 ntBASIC3.31□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 88.2 ms