Protein–RNA interactions for Protein: P20908

COL5A1, Collagen alpha-1(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1P20908 Y_RNA.40-201ENST00000362645 93 ntBASIC2.49□□□□□ -2.01
COL5A1P20908 SNORA62.2-201ENST00000364672 152 ntBASIC2.49□□□□□ -2.01
COL5A1P20908 SNORA27.3-201ENST00000364937 134 ntBASIC2.49□□□□□ -2.01
COL5A1P20908 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
COL5A1P20908 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC2.49□□□□□ -2.01
COL5A1P20908 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
COL5A1P20908 AL359511.1-201ENST00000402970 211 ntBASIC2.49□□□□□ -2.01
COL5A1P20908 AL355379.1-201ENST00000405542 640 ntBASIC2.49□□□□□ -2.01
COL5A1P20908 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
COL5A1P20908 AC073464.3-201ENST00000422564 712 ntBASIC2.49□□□□□ -2.01
COL5A1P20908 MORF4L1P7-201ENST00000426038 703 ntBASIC2.49□□□□□ -2.01
COL5A1P20908 AL592437.1-201ENST00000443781 492 ntBASIC2.49□□□□□ -2.01
COL5A1P20908 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC2.49□□□□□ -2.01
COL5A1P20908 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC2.49□□□□□ -2.01
COL5A1P20908 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC2.49□□□□□ -2.01
COL5A1P20908 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC2.49□□□□□ -2.01
COL5A1P20908 RPL9P33-201ENST00000484311 566 ntBASIC2.49□□□□□ -2.01
COL5A1P20908 RN7SL283P-201ENST00000489055 303 ntBASIC2.49□□□□□ -2.01
COL5A1P20908 OR4V1P-201ENST00000525394 1140 ntBASIC2.49□□□□□ -2.01
COL5A1P20908 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC2.49□□□□□ -2.01
COL5A1P20908 RPAP2P1-201ENST00000603626 1168 ntBASIC2.49□□□□□ -2.01
COL5A1P20908 CR589904.2-201ENST00000612533 440 ntBASIC2.49□□□□□ -2.01
COL5A1P20908 MIR1264-201ENST00000616374 69 ntBASIC2.49□□□□□ -2.01
COL5A1P20908 AC097372.4-201ENST00000625025 466 ntBASIC2.49□□□□□ -2.01
COL5A1P20908 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
COL5A1P20908 AL592437.2-201ENST00000421655 2434 ntBASIC2.49□□□□□ -2.01
COL5A1P20908 BX005019.1-201ENST00000561881 1810 ntBASIC2.48□□□□□ -2.01
COL5A1P20908 OR4G2P-202ENST00000641004 1759 ntBASIC2.48□□□□□ -2.01
COL5A1P20908 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
COL5A1P20908 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC2.48□□□□□ -2.01
COL5A1P20908 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
COL5A1P20908 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
COL5A1P20908 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
COL5A1P20908 RNVU1-3-201ENST00000364313 161 ntBASIC2.48□□□□□ -2.01
COL5A1P20908 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC2.48□□□□□ -2.01
COL5A1P20908 NDUFB4P5-201ENST00000415445 361 ntBASIC2.48□□□□□ -2.01
COL5A1P20908 VN1R31P-201ENST00000417498 730 ntBASIC2.48□□□□□ -2.01
COL5A1P20908 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC2.48□□□□□ -2.01
COL5A1P20908 FAM103A2P-201ENST00000444122 354 ntBASIC2.48□□□□□ -2.01
COL5A1P20908 snoU109.3-201ENST00000459477 145 ntBASIC2.48□□□□□ -2.01
COL5A1P20908 RPL21P99-201ENST00000480369 423 ntBASIC2.48□□□□□ -2.01
COL5A1P20908 CKS1BP2-201ENST00000497342 240 ntBASIC2.48□□□□□ -2.01
COL5A1P20908 AC010460.2-201ENST00000509054 677 ntBASIC2.48□□□□□ -2.01
COL5A1P20908 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC2.48□□□□□ -2.01
COL5A1P20908 RNU6-319P-201ENST00000516025 108 ntBASIC2.48□□□□□ -2.01
COL5A1P20908 RNA5SP76-201ENST00000516277 87 ntBASIC2.48□□□□□ -2.01
COL5A1P20908 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC2.48□□□□□ -2.01
COL5A1P20908 IGLVIV-66-1-201ENST00000521832 460 ntBASIC2.48□□□□□ -2.01
COL5A1P20908 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC2.48□□□□□ -2.01
COL5A1P20908 NPM1P35-201ENST00000533043 868 ntBASIC2.48□□□□□ -2.01
COL5A1P20908 MAL2-203ENST00000534619 578 ntTSL 4 BASIC2.48□□□□□ -2.01
COL5A1P20908 C1GALT1P1-201ENST00000548895 1089 ntBASIC2.48□□□□□ -2.01
COL5A1P20908 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC2.48□□□□□ -2.01
COL5A1P20908 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC2.48□□□□□ -2.01
COL5A1P20908 CASC16-202ENST00000563844 610 ntTSL 3 BASIC2.48□□□□□ -2.01
COL5A1P20908 AC079148.1-201ENST00000565944 819 ntBASIC2.48□□□□□ -2.01
COL5A1P20908 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC2.48□□□□□ -2.01
COL5A1P20908 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC2.48□□□□□ -2.01
COL5A1P20908 AC133794.1-201ENST00000602731 914 ntBASIC2.48□□□□□ -2.01
COL5A1P20908 AL445493.3-201ENST00000619568 477 ntBASIC2.48□□□□□ -2.01
COL5A1P20908 AC009269.6-201ENST00000621778 588 ntBASIC2.48□□□□□ -2.01
COL5A1P20908 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC2.48□□□□□ -2.01
COL5A1P20908 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.47□□□□□ -2.01
COL5A1P20908 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
COL5A1P20908 AC010733.2-201ENST00000589496 5702 ntBASIC2.47□□□□□ -2.01
COL5A1P20908 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
COL5A1P20908 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC2.47□□□□□ -2.01
COL5A1P20908 RNU6-1331P-201ENST00000363658 106 ntBASIC2.47□□□□□ -2.01
COL5A1P20908 MIR181A2-201ENST00000384863 110 ntBASIC2.47□□□□□ -2.01
COL5A1P20908 RNU6-1176P-201ENST00000390955 107 ntBASIC2.47□□□□□ -2.01
COL5A1P20908 AL079342.1-201ENST00000401460 267 ntBASIC2.47□□□□□ -2.01
COL5A1P20908 AL590004.2-201ENST00000404787 371 ntBASIC2.47□□□□□ -2.01
COL5A1P20908 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.47□□□□□ -2.01
COL5A1P20908 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.47□□□□□ -2.01
COL5A1P20908 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC2.47□□□□□ -2.01
COL5A1P20908 AC244505.4-201ENST00000434905 287 ntBASIC2.47□□□□□ -2.01
COL5A1P20908 MTND2P21-201ENST00000436242 1042 ntBASIC2.47□□□□□ -2.01
COL5A1P20908 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC2.47□□□□□ -2.01
COL5A1P20908 SSXP5-201ENST00000443473 287 ntBASIC2.47□□□□□ -2.01
COL5A1P20908 AL590399.6-201ENST00000446396 307 ntBASIC2.47□□□□□ -2.01
COL5A1P20908 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
COL5A1P20908 AC008280.2-201ENST00000455473 307 ntBASIC2.47□□□□□ -2.01
COL5A1P20908 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC2.47□□□□□ -2.01
COL5A1P20908 AC100870.1-201ENST00000522035 505 ntBASIC2.47□□□□□ -2.01
COL5A1P20908 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC2.47□□□□□ -2.01
COL5A1P20908 CD69-203ENST00000536709 1020 ntTSL 2 BASIC2.47□□□□□ -2.01
COL5A1P20908 EMP1-206ENST00000537612 505 ntTSL 3 BASIC2.47□□□□□ -2.01
COL5A1P20908 AC010928.3-201ENST00000587712 541 ntBASIC2.47□□□□□ -2.01
COL5A1P20908 NTAN1P1-201ENST00000603150 646 ntBASIC2.47□□□□□ -2.01
COL5A1P20908 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC2.47□□□□□ -2.01
COL5A1P20908 AL049777.1-201ENST00000622740 518 ntBASIC2.47□□□□□ -2.01
COL5A1P20908 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC2.47□□□□□ -2.01
COL5A1P20908 MIR6733-201ENST00000635723 61 ntBASIC2.47□□□□□ -2.01
COL5A1P20908 AL021368.2-201ENST00000606125 5352 ntBASIC2.47□□□□□ -2.01
COL5A1P20908 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
COL5A1P20908 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.47□□□□□ -2.01
COL5A1P20908 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
COL5A1P20908 RNU1-100P-201ENST00000365255 165 ntBASIC2.47□□□□□ -2.01
COL5A1P20908 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
COL5A1P20908 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC2.47□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 128.7 ms