Protein–RNA interactions for Protein: P13942

COL11A2, Collagen alpha-2(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2P13942 AC111193.1-201ENST00000504097 155 ntBASIC4.59□□□□□ -1.67
COL11A2P13942 ARL4AP2-201ENST00000507378 601 ntBASIC4.59□□□□□ -1.67
COL11A2P13942 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC4.59□□□□□ -1.67
COL11A2P13942 FTH1P11-201ENST00000517577 551 ntBASIC4.59□□□□□ -1.67
COL11A2P13942 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC4.59□□□□□ -1.67
COL11A2P13942 AP005639.2-201ENST00000527592 928 ntBASIC4.59□□□□□ -1.67
COL11A2P13942 OR4A12P-201ENST00000530847 918 ntBASIC4.59□□□□□ -1.67
COL11A2P13942 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC4.59□□□□□ -1.67
COL11A2P13942 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC4.59□□□□□ -1.67
COL11A2P13942 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC4.59□□□□□ -1.67
COL11A2P13942 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
COL11A2P13942 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.59□□□□□ -1.67
COL11A2P13942 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC4.59□□□□□ -1.67
COL11A2P13942 MYOCOS-203ENST00000637303 564 ntAPPRIS P5 TSL 5 BASIC4.59□□□□□ -1.67
COL11A2P13942 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC4.59□□□□□ -1.67
COL11A2P13942 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC4.59□□□□□ -1.67
COL11A2P13942 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
COL11A2P13942 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC4.59□□□□□ -1.68
COL11A2P13942 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC4.58□□□□□ -1.68
COL11A2P13942 MAPK10-320ENST00000641462 6696 ntBASIC4.58□□□□□ -1.68
COL11A2P13942 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
COL11A2P13942 RNY4P14-201ENST00000363656 96 ntBASIC4.58□□□□□ -1.68
COL11A2P13942 RNU6-621P-201ENST00000364752 109 ntBASIC4.58□□□□□ -1.68
COL11A2P13942 MTCYBP36-201ENST00000404146 440 ntBASIC4.58□□□□□ -1.68
COL11A2P13942 OFD1P18Y-201ENST00000420889 959 ntBASIC4.58□□□□□ -1.68
COL11A2P13942 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC4.58□□□□□ -1.68
COL11A2P13942 AC097713.2-201ENST00000430199 356 ntBASIC4.58□□□□□ -1.68
COL11A2P13942 TRIM60P3Y-201ENST00000432201 673 ntBASIC4.58□□□□□ -1.68
COL11A2P13942 AC005019.1-201ENST00000436455 431 ntBASIC4.58□□□□□ -1.68
COL11A2P13942 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC4.58□□□□□ -1.68
COL11A2P13942 AC017015.1-201ENST00000477387 286 ntBASIC4.58□□□□□ -1.68
COL11A2P13942 RPL7P38-201ENST00000488396 739 ntBASIC4.58□□□□□ -1.68
COL11A2P13942 AC105252.1-201ENST00000503089 286 ntBASIC4.58□□□□□ -1.68
COL11A2P13942 AC009646.1-201ENST00000510455 318 ntBASIC4.58□□□□□ -1.68
COL11A2P13942 MTND3P22-201ENST00000510932 243 ntBASIC4.58□□□□□ -1.68
COL11A2P13942 IGKV2-38-201ENST00000517443 247 ntBASIC4.58□□□□□ -1.68
COL11A2P13942 MTCO2P4-201ENST00000517968 247 ntBASIC4.58□□□□□ -1.68
COL11A2P13942 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC4.58□□□□□ -1.68
COL11A2P13942 NACA-211ENST00000548563 827 ntTSL 5 BASIC4.58□□□□□ -1.68
COL11A2P13942 AC069240.1-201ENST00000548774 375 ntBASIC4.58□□□□□ -1.68
COL11A2P13942 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC4.58□□□□□ -1.68
COL11A2P13942 AL133457.1-201ENST00000564251 987 ntBASIC4.58□□□□□ -1.68
COL11A2P13942 MIR3913-1-201ENST00000577744 102 ntBASIC4.58□□□□□ -1.68
COL11A2P13942 DUXAP4-201ENST00000603046 613 ntBASIC4.58□□□□□ -1.68
COL11A2P13942 AC107214.2-201ENST00000608204 634 ntBASIC4.58□□□□□ -1.68
COL11A2P13942 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
COL11A2P13942 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
COL11A2P13942 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
COL11A2P13942 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
COL11A2P13942 KIF14-202ENST00000614960 6838 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
COL11A2P13942 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.58□□□□□ -1.68
COL11A2P13942 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
COL11A2P13942 PCDH18-202ENST00000412923 5102 ntAPPRIS ALT1 TSL 1 (best) BASIC4.58□□□□□ -1.68
COL11A2P13942 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC4.58□□□□□ -1.68
COL11A2P13942 RPL21P132-201ENST00000331267 462 ntBASIC4.58□□□□□ -1.68
COL11A2P13942 Y_RNA.38-201ENST00000362617 102 ntBASIC4.58□□□□□ -1.68
COL11A2P13942 RNU6-1066P-201ENST00000363573 105 ntBASIC4.58□□□□□ -1.68
COL11A2P13942 RNA5SP50-201ENST00000363731 107 ntBASIC4.58□□□□□ -1.68
COL11A2P13942 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
COL11A2P13942 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC4.58□□□□□ -1.68
COL11A2P13942 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC4.58□□□□□ -1.68
COL11A2P13942 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC4.58□□□□□ -1.68
COL11A2P13942 OFD1P12Y-201ENST00000427963 1207 ntBASIC4.58□□□□□ -1.68
COL11A2P13942 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC4.58□□□□□ -1.68
COL11A2P13942 DYNLL1P7-201ENST00000429273 258 ntBASIC4.58□□□□□ -1.68
COL11A2P13942 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC4.58□□□□□ -1.68
COL11A2P13942 AC073614.1-201ENST00000438690 650 ntBASIC4.58□□□□□ -1.68
COL11A2P13942 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC4.58□□□□□ -1.68
COL11A2P13942 RPL30P9-201ENST00000465586 330 ntBASIC4.58□□□□□ -1.68
COL11A2P13942 HMGN1P12-201ENST00000499125 195 ntBASIC4.58□□□□□ -1.68
COL11A2P13942 AC091133.4-201ENST00000511142 308 ntBASIC4.58□□□□□ -1.68
COL11A2P13942 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC4.58□□□□□ -1.68
COL11A2P13942 SNORA20.3-201ENST00000516880 132 ntBASIC4.58□□□□□ -1.68
COL11A2P13942 OR5AQ1P-201ENST00000527596 927 ntBASIC4.58□□□□□ -1.68
COL11A2P13942 AC103843.2-201ENST00000530523 682 ntBASIC4.58□□□□□ -1.68
COL11A2P13942 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC4.58□□□□□ -1.68
COL11A2P13942 MIR548AB-201ENST00000584917 84 ntBASIC4.58□□□□□ -1.68
COL11A2P13942 PART1_1.1-201ENST00000611761 217 ntBASIC4.58□□□□□ -1.68
COL11A2P13942 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.58□□□□□ -1.68
COL11A2P13942 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC4.58□□□□□ -1.68
COL11A2P13942 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC4.57□□□□□ -1.68
COL11A2P13942 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
COL11A2P13942 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.57□□□□□ -1.68
COL11A2P13942 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
COL11A2P13942 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC4.57□□□□□ -1.68
COL11A2P13942 AC139426.3-201ENST00000605648 2059 ntBASIC4.57□□□□□ -1.68
COL11A2P13942 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
COL11A2P13942 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
COL11A2P13942 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
COL11A2P13942 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
COL11A2P13942 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
COL11A2P13942 CASC19-280ENST00000642102 1351 ntBASIC4.57□□□□□ -1.68
COL11A2P13942 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC4.57□□□□□ -1.68
COL11A2P13942 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.57□□□□□ -1.68
COL11A2P13942 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC4.57□□□□□ -1.68
COL11A2P13942 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC4.57□□□□□ -1.68
COL11A2P13942 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
COL11A2P13942 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
COL11A2P13942 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
COL11A2P13942 Y_RNA.111-201ENST00000363248 100 ntBASIC4.57□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 90.7 ms