Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC2.19□□□□□ -2.06
FREM3P0C091 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC2.19□□□□□ -2.06
FREM3P0C091 MTCYBP12-201ENST00000440559 1134 ntBASIC2.19□□□□□ -2.06
FREM3P0C091 HMGN1P5-201ENST00000448591 263 ntBASIC2.19□□□□□ -2.06
FREM3P0C091 MTCYBP14-201ENST00000457471 715 ntBASIC2.19□□□□□ -2.06
FREM3P0C091 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC2.19□□□□□ -2.06
FREM3P0C091 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC2.19□□□□□ -2.06
FREM3P0C091 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC2.19□□□□□ -2.06
FREM3P0C091 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC2.19□□□□□ -2.06
FREM3P0C091 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC2.19□□□□□ -2.06
FREM3P0C091 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
FREM3P0C091 AC128657.1-201ENST00000549459 145 ntBASIC2.19□□□□□ -2.06
FREM3P0C091 AC010198.2-201ENST00000550612 259 ntBASIC2.19□□□□□ -2.06
FREM3P0C091 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC2.19□□□□□ -2.06
FREM3P0C091 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC2.19□□□□□ -2.06
FREM3P0C091 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
FREM3P0C091 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC2.19□□□□□ -2.06
FREM3P0C091 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC2.19□□□□□ -2.06
FREM3P0C091 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
FREM3P0C091 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
FREM3P0C091 AL157700.1-201ENST00000561973 1432 ntBASIC2.18□□□□□ -2.06
FREM3P0C091 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC2.18□□□□□ -2.06
FREM3P0C091 U8.2-201ENST00000363156 134 ntBASIC2.18□□□□□ -2.06
FREM3P0C091 SNORA36C-201ENST00000384289 132 ntBASIC2.18□□□□□ -2.06
FREM3P0C091 AL158825.1-201ENST00000414735 521 ntBASIC2.18□□□□□ -2.06
FREM3P0C091 LINC00446-201ENST00000414743 459 ntTSL 5 BASIC2.18□□□□□ -2.06
FREM3P0C091 RPL21P112-201ENST00000434403 463 ntBASIC2.18□□□□□ -2.06
FREM3P0C091 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC2.18□□□□□ -2.06
FREM3P0C091 AC010095.1-201ENST00000443543 144 ntBASIC2.18□□□□□ -2.06
FREM3P0C091 snoU13.26-201ENST00000459452 105 ntBASIC2.18□□□□□ -2.06
FREM3P0C091 OR4G11P-201ENST00000492842 939 ntBASIC2.18□□□□□ -2.06
FREM3P0C091 RNU6-1308P-201ENST00000516817 103 ntBASIC2.18□□□□□ -2.06
FREM3P0C091 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC2.18□□□□□ -2.06
FREM3P0C091 AP003102.1-201ENST00000525638 661 ntBASIC2.18□□□□□ -2.06
FREM3P0C091 OR6C73P-201ENST00000546432 358 ntBASIC2.18□□□□□ -2.06
FREM3P0C091 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC2.18□□□□□ -2.06
FREM3P0C091 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC2.18□□□□□ -2.06
FREM3P0C091 MIR4648-201ENST00000580107 72 ntBASIC2.18□□□□□ -2.06
FREM3P0C091 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.18□□□□□ -2.06
FREM3P0C091 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC2.18□□□□□ -2.06
FREM3P0C091 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
FREM3P0C091 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
FREM3P0C091 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
FREM3P0C091 RNU6-317P-201ENST00000384031 107 ntBASIC2.18□□□□□ -2.06
FREM3P0C091 MIR887-201ENST00000401258 79 ntBASIC2.18□□□□□ -2.06
FREM3P0C091 AL590290.1-201ENST00000405336 380 ntBASIC2.18□□□□□ -2.06
FREM3P0C091 MRPL50P2-201ENST00000416821 482 ntBASIC2.18□□□□□ -2.06
FREM3P0C091 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC2.18□□□□□ -2.06
FREM3P0C091 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC2.18□□□□□ -2.06
FREM3P0C091 AC104629.2-201ENST00000468627 598 ntBASIC2.18□□□□□ -2.06
FREM3P0C091 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC2.18□□□□□ -2.06
FREM3P0C091 THAP6-212ENST00000508105 1103 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
FREM3P0C091 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.18□□□□□ -2.06
FREM3P0C091 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC2.18□□□□□ -2.06
FREM3P0C091 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC2.18□□□□□ -2.06
FREM3P0C091 AC010620.2-201ENST00000600135 313 ntBASIC2.18□□□□□ -2.06
FREM3P0C091 AL450472.3-201ENST00000615578 367 ntBASIC2.18□□□□□ -2.06
FREM3P0C091 AC011472.4-201ENST00000615848 491 ntBASIC2.18□□□□□ -2.06
FREM3P0C091 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC2.18□□□□□ -2.06
FREM3P0C091 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC2.18□□□□□ -2.06
FREM3P0C091 AC002546.1-201ENST00000588041 2504 ntBASIC2.18□□□□□ -2.06
FREM3P0C091 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.18□□□□□ -2.06
FREM3P0C091 U8.8-201ENST00000365399 135 ntBASIC2.17□□□□□ -2.06
FREM3P0C091 ATG3P1-201ENST00000419507 911 ntBASIC2.17□□□□□ -2.06
FREM3P0C091 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC2.17□□□□□ -2.06
FREM3P0C091 CBX1P4-201ENST00000439415 457 ntBASIC2.17□□□□□ -2.06
FREM3P0C091 VN1R17P-201ENST00000472048 1090 ntBASIC2.17□□□□□ -2.06
FREM3P0C091 RN7SKP234-201ENST00000517173 224 ntBASIC2.17□□□□□ -2.06
FREM3P0C091 ZDHHC20P3-201ENST00000531576 336 ntBASIC2.17□□□□□ -2.06
FREM3P0C091 AP000916.1-201ENST00000533869 835 ntBASIC2.17□□□□□ -2.06
FREM3P0C091 AC123904.3-201ENST00000547218 814 ntBASIC2.17□□□□□ -2.06
FREM3P0C091 AC068313.1-201ENST00000604028 1008 ntBASIC2.17□□□□□ -2.06
FREM3P0C091 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC2.17□□□□□ -2.06
FREM3P0C091 AC048347.1-201ENST00000624621 427 ntBASIC2.17□□□□□ -2.06
FREM3P0C091 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC2.17□□□□□ -2.06
FREM3P0C091 MIR4496-201ENST00000635896 61 ntBASIC2.17□□□□□ -2.06
FREM3P0C091 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
FREM3P0C091 AC110774.1-201ENST00000623567 2018 ntBASIC2.17□□□□□ -2.06
FREM3P0C091 MTND5P3-201ENST00000438536 1800 ntBASIC2.17□□□□□ -2.06
FREM3P0C091 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.17□□□□□ -2.06
FREM3P0C091 RNU2-71P-201ENST00000411395 189 ntBASIC2.17□□□□□ -2.06
FREM3P0C091 MTCO2P17-201ENST00000424336 677 ntBASIC2.17□□□□□ -2.06
FREM3P0C091 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC2.17□□□□□ -2.06
FREM3P0C091 NEK4P1-201ENST00000433383 879 ntBASIC2.17□□□□□ -2.06
FREM3P0C091 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC2.17□□□□□ -2.06
FREM3P0C091 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
FREM3P0C091 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.17□□□□□ -2.06
FREM3P0C091 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC2.17□□□□□ -2.06
FREM3P0C091 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC2.17□□□□□ -2.06
FREM3P0C091 AC112503.1-201ENST00000608436 391 ntBASIC2.17□□□□□ -2.06
FREM3P0C091 AC087241.4-201ENST00000612441 480 ntBASIC2.17□□□□□ -2.06
FREM3P0C091 MIR6766-201ENST00000622641 72 ntBASIC2.17□□□□□ -2.06
FREM3P0C091 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
FREM3P0C091 DEFB135-201ENST00000382208 234 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
FREM3P0C091 RN7SKP32-201ENST00000410167 303 ntBASIC2.16□□□□□ -2.06
FREM3P0C091 RN7SKP140-201ENST00000411196 284 ntBASIC2.16□□□□□ -2.06
FREM3P0C091 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC2.16□□□□□ -2.06
FREM3P0C091 AC007064.1-201ENST00000412238 351 ntBASIC2.16□□□□□ -2.06
FREM3P0C091 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC2.16□□□□□ -2.06
FREM3P0C091 AC091179.1-201ENST00000461606 579 ntBASIC2.16□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 98.6 ms