Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
CD48P09326 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.64□□□□□ -1.83
CD48P09326 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.64□□□□□ -1.83
CD48P09326 RNU1-64P-201ENST00000365443 163 ntBASIC3.64□□□□□ -1.83
CD48P09326 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
CD48P09326 MIR134-201ENST00000385258 73 ntBASIC3.64□□□□□ -1.83
CD48P09326 AGR3-202ENST00000402239 563 ntTSL 2 BASIC3.64□□□□□ -1.83
CD48P09326 MTCO3P31-201ENST00000405526 789 ntBASIC3.64□□□□□ -1.83
CD48P09326 AL136133.1-201ENST00000413694 376 ntBASIC3.64□□□□□ -1.83
CD48P09326 AC068533.1-201ENST00000418542 415 ntBASIC3.64□□□□□ -1.83
CD48P09326 Z99497.1-201ENST00000421282 135 ntBASIC3.64□□□□□ -1.83
CD48P09326 AL158071.1-201ENST00000430315 461 ntBASIC3.64□□□□□ -1.83
CD48P09326 AC010153.1-201ENST00000432862 727 ntBASIC3.64□□□□□ -1.83
CD48P09326 RPS20P1-201ENST00000434853 354 ntBASIC3.64□□□□□ -1.83
CD48P09326 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
CD48P09326 PPIAP3-201ENST00000450588 505 ntBASIC3.64□□□□□ -1.83
CD48P09326 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC3.64□□□□□ -1.83
CD48P09326 HMGN3P1-201ENST00000453847 193 ntBASIC3.64□□□□□ -1.83
CD48P09326 RN7SL594P-201ENST00000470590 287 ntBASIC3.64□□□□□ -1.83
CD48P09326 NCOR1P1-202ENST00000486162 291 ntBASIC3.64□□□□□ -1.83
CD48P09326 SETP14-201ENST00000497538 873 ntBASIC3.64□□□□□ -1.83
CD48P09326 HMGN1P11-201ENST00000508668 303 ntBASIC3.64□□□□□ -1.83
CD48P09326 MTCYBP37-201ENST00000510642 1133 ntBASIC3.64□□□□□ -1.83
CD48P09326 LTV1P1-201ENST00000510683 1237 ntBASIC3.64□□□□□ -1.83
CD48P09326 AC104619.4-201ENST00000510773 249 ntBASIC3.64□□□□□ -1.83
CD48P09326 RNU2-27P-201ENST00000516185 142 ntBASIC3.64□□□□□ -1.83
CD48P09326 RNU1-95P-201ENST00000516357 160 ntBASIC3.64□□□□□ -1.83
CD48P09326 RNU1-128P-201ENST00000516704 160 ntBASIC3.64□□□□□ -1.83
CD48P09326 RN7SKP96-201ENST00000516948 297 ntBASIC3.64□□□□□ -1.83
CD48P09326 SOD1P3-201ENST00000518682 454 ntBASIC3.64□□□□□ -1.83
CD48P09326 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC3.64□□□□□ -1.83
CD48P09326 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
CD48P09326 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC3.64□□□□□ -1.83
CD48P09326 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC3.64□□□□□ -1.83
CD48P09326 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC3.64□□□□□ -1.83
CD48P09326 SERPINE4P-201ENST00000554978 281 ntBASIC3.64□□□□□ -1.83
CD48P09326 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC3.64□□□□□ -1.83
CD48P09326 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC3.64□□□□□ -1.83
CD48P09326 AC011260.1-201ENST00000578420 472 ntBASIC3.64□□□□□ -1.83
CD48P09326 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC3.64□□□□□ -1.83
CD48P09326 AC103987.3-201ENST00000582071 292 ntBASIC3.64□□□□□ -1.83
CD48P09326 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC3.64□□□□□ -1.83
CD48P09326 AC064872.1-201ENST00000604823 1072 ntBASIC3.64□□□□□ -1.83
CD48P09326 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC3.64□□□□□ -1.83
CD48P09326 AC116447.1-201ENST00000613153 453 ntBASIC3.64□□□□□ -1.83
CD48P09326 AC015908.5-201ENST00000623289 343 ntBASIC3.64□□□□□ -1.83
CD48P09326 AC098679.4-201ENST00000624241 654 ntBASIC3.64□□□□□ -1.83
CD48P09326 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC3.64□□□□□ -1.83
CD48P09326 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
CD48P09326 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.64□□□□□ -1.83
CD48P09326 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
CD48P09326 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
CD48P09326 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.64□□□□□ -1.83
CD48P09326 PHKBP1-201ENST00000450951 1951 ntBASIC3.63□□□□□ -1.83
CD48P09326 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
CD48P09326 AL390237.1-201ENST00000404226 1415 ntBASIC3.63□□□□□ -1.83
CD48P09326 AP001486.2-201ENST00000561652 5113 ntBASIC3.63□□□□□ -1.83
CD48P09326 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC3.63□□□□□ -1.83
CD48P09326 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
CD48P09326 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
CD48P09326 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC3.63□□□□□ -1.83
CD48P09326 ZNF833P-201ENST00000424938 1494 ntBASIC3.63□□□□□ -1.83
CD48P09326 Y_RNA.25-201ENST00000362528 102 ntBASIC3.63□□□□□ -1.83
CD48P09326 SNORA4.1-201ENST00000364263 144 ntBASIC3.63□□□□□ -1.83
CD48P09326 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
CD48P09326 Y_RNA.560-201ENST00000384689 102 ntBASIC3.63□□□□□ -1.83
CD48P09326 PRRC2CP1-201ENST00000404428 159 ntBASIC3.63□□□□□ -1.83
CD48P09326 RNU6-920P-201ENST00000410926 92 ntBASIC3.63□□□□□ -1.83
CD48P09326 RPS15AP38-201ENST00000413110 372 ntBASIC3.63□□□□□ -1.83
CD48P09326 AC008280.1-201ENST00000418851 412 ntBASIC3.63□□□□□ -1.83
CD48P09326 MTCO3P1-205ENST00000422088 832 ntBASIC3.63□□□□□ -1.83
CD48P09326 RPL31P12-201ENST00000422587 358 ntBASIC3.63□□□□□ -1.83
CD48P09326 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
CD48P09326 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC3.63□□□□□ -1.83
CD48P09326 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC3.63□□□□□ -1.83
CD48P09326 MTCYBP39-201ENST00000437562 491 ntBASIC3.63□□□□□ -1.83
CD48P09326 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC3.63□□□□□ -1.83
CD48P09326 TAF9P1-201ENST00000445421 515 ntBASIC3.63□□□□□ -1.83
CD48P09326 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
CD48P09326 AL445669.2-201ENST00000454425 421 ntBASIC3.63□□□□□ -1.83
CD48P09326 TAF9P2-201ENST00000454958 515 ntBASIC3.63□□□□□ -1.83
CD48P09326 RPS15AP1-201ENST00000457423 391 ntBASIC3.63□□□□□ -1.83
CD48P09326 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC3.63□□□□□ -1.83
CD48P09326 RAD51AP1P1-201ENST00000484195 1001 ntBASIC3.63□□□□□ -1.83
CD48P09326 RPL21P129-201ENST00000491732 478 ntBASIC3.63□□□□□ -1.83
CD48P09326 RPL7P47-201ENST00000497299 556 ntBASIC3.63□□□□□ -1.83
CD48P09326 DSTNP2-201ENST00000504533 515 ntBASIC3.63□□□□□ -1.83
CD48P09326 HMGB1P28-201ENST00000507778 552 ntBASIC3.63□□□□□ -1.83
CD48P09326 MTND5P13-201ENST00000513046 1079 ntBASIC3.63□□□□□ -1.83
CD48P09326 NDUFB9P3-201ENST00000521269 501 ntBASIC3.63□□□□□ -1.83
CD48P09326 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC3.63□□□□□ -1.83
CD48P09326 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
CD48P09326 OR7K1P-201ENST00000546439 926 ntBASIC3.63□□□□□ -1.83
CD48P09326 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC3.63□□□□□ -1.83
CD48P09326 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC3.63□□□□□ -1.83
CD48P09326 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC3.63□□□□□ -1.83
CD48P09326 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.63□□□□□ -1.83
CD48P09326 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC3.63□□□□□ -1.83
CD48P09326 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC3.63□□□□□ -1.83
CD48P09326 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC3.63□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 79.6 ms