Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 ZNF33BP1-201ENST00000452497 1834 ntBASIC2.59□□□□□ -1.99
HLA-DQB2P05538 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC2.59□□□□□ -1.99
HLA-DQB2P05538 RNU6-525P-201ENST00000363685 104 ntBASIC2.59□□□□□ -1.99
HLA-DQB2P05538 U8.9-201ENST00000365667 134 ntBASIC2.59□□□□□ -1.99
HLA-DQB2P05538 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
HLA-DQB2P05538 UQCRFS1P3-201ENST00000407697 385 ntBASIC2.59□□□□□ -1.99
HLA-DQB2P05538 AC080125.1-201ENST00000414888 684 ntBASIC2.59□□□□□ -1.99
HLA-DQB2P05538 MRPL50P2-201ENST00000416821 482 ntBASIC2.59□□□□□ -1.99
HLA-DQB2P05538 MTCYBP24-201ENST00000420387 1106 ntBASIC2.59□□□□□ -1.99
HLA-DQB2P05538 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC2.59□□□□□ -1.99
HLA-DQB2P05538 FO393419.3-201ENST00000428741 282 ntBASIC2.59□□□□□ -1.99
HLA-DQB2P05538 RPL36AP6-201ENST00000435770 321 ntBASIC2.59□□□□□ -1.99
HLA-DQB2P05538 RPL39P40-201ENST00000445481 146 ntBASIC2.59□□□□□ -1.99
HLA-DQB2P05538 AC005002.1-201ENST00000447458 540 ntBASIC2.59□□□□□ -1.99
HLA-DQB2P05538 RPL23AP15-201ENST00000450202 459 ntBASIC2.59□□□□□ -1.99
HLA-DQB2P05538 Z99714.1-201ENST00000450463 807 ntBASIC2.59□□□□□ -1.99
HLA-DQB2P05538 AC126182.1-201ENST00000478134 357 ntBASIC2.59□□□□□ -1.99
HLA-DQB2P05538 AL049873.1-201ENST00000480540 376 ntBASIC2.59□□□□□ -1.99
HLA-DQB2P05538 SNORA31.13-201ENST00000516624 135 ntBASIC2.59□□□□□ -1.99
HLA-DQB2P05538 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC2.59□□□□□ -1.99
HLA-DQB2P05538 IGLVIV-66-1-201ENST00000521832 460 ntBASIC2.59□□□□□ -1.99
HLA-DQB2P05538 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC2.59□□□□□ -1.99
HLA-DQB2P05538 OR5AK3P-201ENST00000527486 1297 ntBASIC2.59□□□□□ -1.99
HLA-DQB2P05538 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC2.59□□□□□ -1.99
HLA-DQB2P05538 ZDHHC20P3-201ENST00000531576 336 ntBASIC2.59□□□□□ -1.99
HLA-DQB2P05538 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
HLA-DQB2P05538 AP003717.3-201ENST00000544832 1180 ntBASIC2.59□□□□□ -1.99
HLA-DQB2P05538 AC010653.1-201ENST00000571108 881 ntBASIC2.59□□□□□ -1.99
HLA-DQB2P05538 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC2.59□□□□□ -1.99
HLA-DQB2P05538 SUMO2P14-201ENST00000604488 293 ntBASIC2.59□□□□□ -1.99
HLA-DQB2P05538 AC011374.2-201ENST00000607135 526 ntBASIC2.59□□□□□ -1.99
HLA-DQB2P05538 LINC00216-201ENST00000623548 1126 ntBASIC2.59□□□□□ -1.99
HLA-DQB2P05538 AC020923.1-201ENST00000624021 917 ntBASIC2.59□□□□□ -1.99
HLA-DQB2P05538 AC004925.1-201ENST00000624256 2706 ntBASIC2.59□□□□□ -2
HLA-DQB2P05538 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -2
HLA-DQB2P05538 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.59□□□□□ -2
HLA-DQB2P05538 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC2.58□□□□□ -2
HLA-DQB2P05538 AP001350.1-201ENST00000601906 1524 ntBASIC2.58□□□□□ -2
HLA-DQB2P05538 AL359893.1-201ENST00000447628 1580 ntBASIC2.58□□□□□ -2
HLA-DQB2P05538 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC2.58□□□□□ -2
HLA-DQB2P05538 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC2.58□□□□□ -2
HLA-DQB2P05538 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC2.58□□□□□ -2
HLA-DQB2P05538 RNU6-629P-201ENST00000384061 103 ntBASIC2.58□□□□□ -2
HLA-DQB2P05538 RNU2-71P-201ENST00000411395 189 ntBASIC2.58□□□□□ -2
HLA-DQB2P05538 HSPE1P1-201ENST00000421494 318 ntBASIC2.58□□□□□ -2
HLA-DQB2P05538 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC2.58□□□□□ -2
HLA-DQB2P05538 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC2.58□□□□□ -2
HLA-DQB2P05538 RPL21P104-201ENST00000464143 478 ntBASIC2.58□□□□□ -2
HLA-DQB2P05538 AC133134.1-201ENST00000466800 359 ntBASIC2.58□□□□□ -2
HLA-DQB2P05538 HMGN2P13-201ENST00000476476 274 ntBASIC2.58□□□□□ -2
HLA-DQB2P05538 RPS27AP9-201ENST00000477681 438 ntBASIC2.58□□□□□ -2
HLA-DQB2P05538 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC2.58□□□□□ -2
HLA-DQB2P05538 AC004924.1-201ENST00000480160 781 ntBASIC2.58□□□□□ -2
HLA-DQB2P05538 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC2.58□□□□□ -2
HLA-DQB2P05538 ARL4AP2-201ENST00000507378 601 ntBASIC2.58□□□□□ -2
HLA-DQB2P05538 RN7SKP96-201ENST00000516948 297 ntBASIC2.58□□□□□ -2
HLA-DQB2P05538 RNU6-889P-201ENST00000517189 103 ntBASIC2.58□□□□□ -2
HLA-DQB2P05538 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC2.58□□□□□ -2
HLA-DQB2P05538 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC2.58□□□□□ -2
HLA-DQB2P05538 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC2.58□□□□□ -2
HLA-DQB2P05538 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC2.58□□□□□ -2
HLA-DQB2P05538 AC092608.2-201ENST00000624427 218 ntBASIC2.58□□□□□ -2
HLA-DQB2P05538 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC2.58□□□□□ -2
HLA-DQB2P05538 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC2.58□□□□□ -2
HLA-DQB2P05538 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC2.58□□□□□ -2
HLA-DQB2P05538 MTND4P8-201ENST00000514997 1362 ntBASIC2.58□□□□□ -2
HLA-DQB2P05538 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.58□□□□□ -2
HLA-DQB2P05538 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC2.58□□□□□ -2
HLA-DQB2P05538 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC2.57□□□□□ -2
HLA-DQB2P05538 AC073055.1-201ENST00000456901 1621 ntBASIC2.57□□□□□ -2
HLA-DQB2P05538 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
HLA-DQB2P05538 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.57□□□□□ -2
HLA-DQB2P05538 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.57□□□□□ -2
HLA-DQB2P05538 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC2.57□□□□□ -2
HLA-DQB2P05538 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
HLA-DQB2P05538 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC2.57□□□□□ -2
HLA-DQB2P05538 RNU6-1243P-201ENST00000364028 107 ntBASIC2.57□□□□□ -2
HLA-DQB2P05538 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC2.57□□□□□ -2
HLA-DQB2P05538 MIR196B-201ENST00000384852 84 ntBASIC2.57□□□□□ -2
HLA-DQB2P05538 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC2.57□□□□□ -2
HLA-DQB2P05538 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC2.57□□□□□ -2
HLA-DQB2P05538 RN7SL432P-201ENST00000484057 298 ntBASIC2.57□□□□□ -2
HLA-DQB2P05538 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC2.57□□□□□ -2
HLA-DQB2P05538 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC2.57□□□□□ -2
HLA-DQB2P05538 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC2.57□□□□□ -2
HLA-DQB2P05538 RNA5SP320-201ENST00000516263 124 ntBASIC2.57□□□□□ -2
HLA-DQB2P05538 RNU6-1073P-201ENST00000517182 106 ntBASIC2.57□□□□□ -2
HLA-DQB2P05538 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC2.57□□□□□ -2
HLA-DQB2P05538 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC2.57□□□□□ -2
HLA-DQB2P05538 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC2.57□□□□□ -2
HLA-DQB2P05538 MIR5092-201ENST00000583139 88 ntBASIC2.57□□□□□ -2
HLA-DQB2P05538 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC2.57□□□□□ -2
HLA-DQB2P05538 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC2.57□□□□□ -2
HLA-DQB2P05538 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC2.57□□□□□ -2
HLA-DQB2P05538 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC2.57□□□□□ -2
HLA-DQB2P05538 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.57□□□□□ -2
HLA-DQB2P05538 AC104446.1-201ENST00000613728 1321 ntBASIC2.57□□□□□ -2
HLA-DQB2P05538 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC2.57□□□□□ -2
HLA-DQB2P05538 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.57□□□□□ -2
HLA-DQB2P05538 AL512646.1-201ENST00000269395 1077 ntBASIC2.56□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 92.3 ms