Protein–RNA interactions for Protein: P02462

COL4A1, Collagen alpha-1(IV) chain, humanhuman

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1P02462 MORF4L1P6-201ENST00000418771 268 ntBASIC2.6□□□□□ -1.99
COL4A1P02462 AL035551.1-201ENST00000446931 348 ntBASIC2.6□□□□□ -1.99
COL4A1P02462 RN7SL499P-201ENST00000481141 276 ntBASIC2.6□□□□□ -1.99
COL4A1P02462 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC2.6□□□□□ -1.99
COL4A1P02462 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC2.6□□□□□ -1.99
COL4A1P02462 AL389895.1-201ENST00000554127 252 ntBASIC2.6□□□□□ -1.99
COL4A1P02462 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC2.6□□□□□ -1.99
COL4A1P02462 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
COL4A1P02462 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC2.59□□□□□ -1.99
COL4A1P02462 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -1.99
COL4A1P02462 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
COL4A1P02462 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
COL4A1P02462 SNORD6-201ENST00000365444 73 ntBASIC2.59□□□□□ -2
COL4A1P02462 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC2.59□□□□□ -2
COL4A1P02462 AC000111.1-201ENST00000441019 221 ntTSL 3 BASIC2.59□□□□□ -2
COL4A1P02462 USP9YP8-201ENST00000441913 500 ntBASIC2.59□□□□□ -2
COL4A1P02462 VN1R96P-201ENST00000446052 858 ntBASIC2.59□□□□□ -2
COL4A1P02462 SEPT7P6-201ENST00000469999 1143 ntBASIC2.59□□□□□ -2
COL4A1P02462 RPS27AP9-201ENST00000477681 438 ntBASIC2.59□□□□□ -2
COL4A1P02462 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC2.59□□□□□ -2
COL4A1P02462 CBX3P5-201ENST00000552017 521 ntBASIC2.59□□□□□ -2
COL4A1P02462 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC2.59□□□□□ -2
COL4A1P02462 MTCO3P13-201ENST00000577757 781 ntBASIC2.59□□□□□ -2
COL4A1P02462 AC015849.6-201ENST00000605454 474 ntBASIC2.59□□□□□ -2
COL4A1P02462 AP004247.3-201ENST00000608682 624 ntBASIC2.59□□□□□ -2
COL4A1P02462 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC2.59□□□□□ -2
COL4A1P02462 MIR219B-201ENST00000637023 88 ntBASIC2.59□□□□□ -2
COL4A1P02462 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC2.58□□□□□ -2
COL4A1P02462 MTND4P35-201ENST00000604257 1375 ntBASIC2.58□□□□□ -2
COL4A1P02462 AC025125.1-201ENST00000624743 1922 ntBASIC2.58□□□□□ -2
COL4A1P02462 CLECL1-201ENST00000327839 670 ntAPPRIS P3 TSL 1 (best) BASIC2.58□□□□□ -2
COL4A1P02462 Y_RNA.4-201ENST00000362333 112 ntBASIC2.58□□□□□ -2
COL4A1P02462 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC2.58□□□□□ -2
COL4A1P02462 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC2.58□□□□□ -2
COL4A1P02462 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC2.58□□□□□ -2
COL4A1P02462 AC104237.2-201ENST00000612456 443 ntBASIC2.58□□□□□ -2
COL4A1P02462 VN1R9P-201ENST00000614184 867 ntBASIC2.58□□□□□ -2
COL4A1P02462 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC2.58□□□□□ -2
COL4A1P02462 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC2.58□□□□□ -2
COL4A1P02462 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC2.58□□□□□ -2
COL4A1P02462 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.58□□□□□ -2
COL4A1P02462 EXOC5P1-201ENST00000510543 1969 ntBASIC2.57□□□□□ -2
COL4A1P02462 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC2.57□□□□□ -2
COL4A1P02462 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC2.57□□□□□ -2
COL4A1P02462 AIMP1P1-201ENST00000418670 937 ntBASIC2.57□□□□□ -2
COL4A1P02462 AL445646.1-201ENST00000431784 216 ntBASIC2.57□□□□□ -2
COL4A1P02462 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC2.57□□□□□ -2
COL4A1P02462 VN1R48P-201ENST00000448149 1036 ntBASIC2.57□□□□□ -2
COL4A1P02462 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC2.57□□□□□ -2
COL4A1P02462 USP9YP5-201ENST00000511770 630 ntBASIC2.57□□□□□ -2
COL4A1P02462 RNU6-548P-201ENST00000517083 115 ntBASIC2.57□□□□□ -2
COL4A1P02462 AC093331.1-201ENST00000521474 169 ntBASIC2.57□□□□□ -2
COL4A1P02462 CD24P2-201ENST00000565486 219 ntBASIC2.57□□□□□ -2
COL4A1P02462 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC2.57□□□□□ -2
COL4A1P02462 ZNF93-209ENST00000638737 1020 ntTSL 5 BASIC2.57□□□□□ -2
COL4A1P02462 RFC1-217ENST00000639695 867 ntTSL 5 BASIC2.57□□□□□ -2
COL4A1P02462 THUMPD3P1-201ENST00000506556 1480 ntBASIC2.57□□□□□ -2
COL4A1P02462 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC2.57□□□□□ -2
COL4A1P02462 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.57□□□□□ -2
COL4A1P02462 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
COL4A1P02462 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
COL4A1P02462 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC2.57□□□□□ -2
COL4A1P02462 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
COL4A1P02462 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC2.57□□□□□ -2
COL4A1P02462 IQCM-206ENST00000636793 1900 ntAPPRIS P5 TSL 5 BASIC2.57□□□□□ -2
COL4A1P02462 MIR6073-201ENST00000352083 89 ntBASIC2.57□□□□□ -2
COL4A1P02462 AL161781.1-201ENST00000354277 403 ntBASIC2.57□□□□□ -2
COL4A1P02462 Y_RNA.226-201ENST00000364337 114 ntBASIC2.57□□□□□ -2
COL4A1P02462 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC2.57□□□□□ -2
COL4A1P02462 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC2.57□□□□□ -2
COL4A1P02462 IFNWP4-201ENST00000453148 294 ntBASIC2.57□□□□□ -2
COL4A1P02462 AP000705.1-201ENST00000454567 350 ntBASIC2.57□□□□□ -2
COL4A1P02462 RNU7-157P-201ENST00000459600 66 ntBASIC2.57□□□□□ -2
COL4A1P02462 AP000926.1-201ENST00000479573 241 ntBASIC2.57□□□□□ -2
COL4A1P02462 NDUFB4P9-201ENST00000511646 388 ntBASIC2.57□□□□□ -2
COL4A1P02462 TBCAP3-201ENST00000512475 312 ntBASIC2.57□□□□□ -2
COL4A1P02462 SNORA70.14-201ENST00000516205 110 ntBASIC2.57□□□□□ -2
COL4A1P02462 OR11H5P-201ENST00000554039 926 ntBASIC2.57□□□□□ -2
COL4A1P02462 AL161752.1-201ENST00000557721 263 ntTSL 2 BASIC2.57□□□□□ -2
COL4A1P02462 AMZ2P1-203ENST00000565833 850 ntBASIC2.57□□□□□ -2
COL4A1P02462 MTCYBP28-201ENST00000566728 1132 ntBASIC2.57□□□□□ -2
COL4A1P02462 BNIP3P8-201ENST00000597863 560 ntBASIC2.57□□□□□ -2
COL4A1P02462 AL137246.1-201ENST00000607072 977 ntBASIC2.57□□□□□ -2
COL4A1P02462 AC009452.1-201ENST00000640823 606 ntBASIC2.57□□□□□ -2
COL4A1P02462 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
COL4A1P02462 AC091564.4-201ENST00000533934 2194 ntBASIC2.56□□□□□ -2
COL4A1P02462 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
COL4A1P02462 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC2.56□□□□□ -2
COL4A1P02462 DEFB135-201ENST00000382208 234 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
COL4A1P02462 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC2.56□□□□□ -2
COL4A1P02462 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC2.56□□□□□ -2
COL4A1P02462 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC2.56□□□□□ -2
COL4A1P02462 AL591719.1-201ENST00000444669 744 ntBASIC2.56□□□□□ -2
COL4A1P02462 RPL7P52-201ENST00000449200 742 ntBASIC2.56□□□□□ -2
COL4A1P02462 CKS1BP2-201ENST00000497342 240 ntBASIC2.56□□□□□ -2
COL4A1P02462 AC068446.3-201ENST00000555285 382 ntBASIC2.56□□□□□ -2
COL4A1P02462 AC090970.1-201ENST00000561207 381 ntTSL 5 BASIC2.56□□□□□ -2
COL4A1P02462 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC2.56□□□□□ -2
COL4A1P02462 AC092650.2-201ENST00000619984 902 ntBASIC2.56□□□□□ -2
COL4A1P02462 AL592437.2-201ENST00000421655 2434 ntBASIC2.55□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 85.5 ms