Protein–RNA interactions for Protein: P02458

COL2A1, Collagen alpha-1(II) chain, humanhuman

Predicted RBP Predictions only

Length 1,487 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1P02458 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC3.67□□□□□ -1.82
COL2A1P02458 PTK2-220ENST00000520151 573 ntTSL 4 BASIC3.67□□□□□ -1.82
COL2A1P02458 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC3.67□□□□□ -1.82
COL2A1P02458 CBX3P7-201ENST00000532876 502 ntBASIC3.67□□□□□ -1.82
COL2A1P02458 AP000916.1-201ENST00000533869 835 ntBASIC3.67□□□□□ -1.82
COL2A1P02458 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC3.67□□□□□ -1.82
COL2A1P02458 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
COL2A1P02458 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC3.67□□□□□ -1.82
COL2A1P02458 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC3.67□□□□□ -1.82
COL2A1P02458 AC022069.1-201ENST00000582910 658 ntBASIC3.67□□□□□ -1.82
COL2A1P02458 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC3.67□□□□□ -1.82
COL2A1P02458 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC3.67□□□□□ -1.82
COL2A1P02458 AC013468.1-201ENST00000608680 598 ntBASIC3.67□□□□□ -1.82
COL2A1P02458 AC245100.7-201ENST00000609678 442 ntBASIC3.67□□□□□ -1.82
COL2A1P02458 AC096586.2-201ENST00000610260 441 ntBASIC3.67□□□□□ -1.82
COL2A1P02458 AL122125.1-201ENST00000616999 600 ntBASIC3.67□□□□□ -1.82
COL2A1P02458 Z69908.1-201ENST00000622603 247 ntBASIC3.67□□□□□ -1.82
COL2A1P02458 AC093875.1-201ENST00000623688 504 ntBASIC3.67□□□□□ -1.82
COL2A1P02458 AC007494.3-201ENST00000624660 743 ntBASIC3.67□□□□□ -1.82
COL2A1P02458 AC091965.5-201ENST00000624785 342 ntBASIC3.67□□□□□ -1.82
COL2A1P02458 AC099654.13-201ENST00000639774 207 ntBASIC3.67□□□□□ -1.82
COL2A1P02458 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC3.67□□□□□ -1.82
COL2A1P02458 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
COL2A1P02458 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC3.66□□□□□ -1.82
COL2A1P02458 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
COL2A1P02458 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.66□□□□□ -1.82
COL2A1P02458 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.66□□□□□ -1.82
COL2A1P02458 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.66□□□□□ -1.82
COL2A1P02458 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.66□□□□□ -1.82
COL2A1P02458 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
COL2A1P02458 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
COL2A1P02458 RNU4-82P-201ENST00000362443 140 ntBASIC3.66□□□□□ -1.82
COL2A1P02458 SNORA71.1-201ENST00000364523 117 ntBASIC3.66□□□□□ -1.82
COL2A1P02458 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
COL2A1P02458 SNORD15B-201ENST00000384714 146 ntBASIC3.66□□□□□ -1.82
COL2A1P02458 SNORD67-201ENST00000390833 111 ntBASIC3.66□□□□□ -1.82
COL2A1P02458 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC3.66□□□□□ -1.82
COL2A1P02458 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC3.66□□□□□ -1.82
COL2A1P02458 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC3.66□□□□□ -1.82
COL2A1P02458 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC3.66□□□□□ -1.82
COL2A1P02458 EEF1A1P39-201ENST00000440791 250 ntBASIC3.66□□□□□ -1.82
COL2A1P02458 RPS12P18-201ENST00000442381 270 ntBASIC3.66□□□□□ -1.82
COL2A1P02458 AL589880.1-201ENST00000448271 287 ntBASIC3.66□□□□□ -1.82
COL2A1P02458 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC3.66□□□□□ -1.82
COL2A1P02458 AC117440.1-201ENST00000474107 571 ntBASIC3.66□□□□□ -1.82
COL2A1P02458 AC105918.1-201ENST00000474399 838 ntBASIC3.66□□□□□ -1.82
COL2A1P02458 S100A11P1-201ENST00000477525 312 ntBASIC3.66□□□□□ -1.82
COL2A1P02458 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC3.66□□□□□ -1.82
COL2A1P02458 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC3.66□□□□□ -1.82
COL2A1P02458 MTND3P5-201ENST00000512798 333 ntBASIC3.66□□□□□ -1.82
COL2A1P02458 AC133963.2-201ENST00000513686 578 ntBASIC3.66□□□□□ -1.82
COL2A1P02458 AC026801.2-201ENST00000515352 425 ntBASIC3.66□□□□□ -1.82
COL2A1P02458 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC3.66□□□□□ -1.82
COL2A1P02458 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC3.66□□□□□ -1.82
COL2A1P02458 MIR4425-201ENST00000580572 84 ntBASIC3.66□□□□□ -1.82
COL2A1P02458 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.66□□□□□ -1.82
COL2A1P02458 RMST_10.1-201ENST00000616309 154 ntBASIC3.66□□□□□ -1.82
COL2A1P02458 AL158163.2-201ENST00000619110 700 ntBASIC3.66□□□□□ -1.82
COL2A1P02458 AC024595.1-201ENST00000623088 387 ntBASIC3.66□□□□□ -1.82
COL2A1P02458 AC019080.5-201ENST00000624891 757 ntBASIC3.66□□□□□ -1.82
COL2A1P02458 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
COL2A1P02458 FOXP2-217ENST00000462331 1388 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
COL2A1P02458 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
COL2A1P02458 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
COL2A1P02458 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
COL2A1P02458 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
COL2A1P02458 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
COL2A1P02458 OR5H15-201ENST00000383696 930 ntBASIC3.65□□□□□ -1.83
COL2A1P02458 U6.112-201ENST00000384129 70 ntBASIC3.65□□□□□ -1.83
COL2A1P02458 Y_RNA.553-201ENST00000384670 102 ntBASIC3.65□□□□□ -1.83
COL2A1P02458 AL355379.1-201ENST00000405542 640 ntBASIC3.65□□□□□ -1.83
COL2A1P02458 RHEBP3-201ENST00000411920 351 ntBASIC3.65□□□□□ -1.83
COL2A1P02458 HMGB1P49-201ENST00000418882 569 ntBASIC3.65□□□□□ -1.83
COL2A1P02458 GLRXP1-201ENST00000423261 334 ntBASIC3.65□□□□□ -1.83
COL2A1P02458 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC3.65□□□□□ -1.83
COL2A1P02458 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC3.65□□□□□ -1.83
COL2A1P02458 ISCA1P2-201ENST00000438679 421 ntBASIC3.65□□□□□ -1.83
COL2A1P02458 HSFY3P-201ENST00000444242 1191 ntBASIC3.65□□□□□ -1.83
COL2A1P02458 RPL34P26-201ENST00000445636 354 ntBASIC3.65□□□□□ -1.83
COL2A1P02458 RPL23AP23-201ENST00000452590 471 ntBASIC3.65□□□□□ -1.83
COL2A1P02458 RPS4XP13-201ENST00000483219 789 ntBASIC3.65□□□□□ -1.83
COL2A1P02458 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC3.65□□□□□ -1.83
COL2A1P02458 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
COL2A1P02458 YWHAEP4-201ENST00000505390 198 ntBASIC3.65□□□□□ -1.83
COL2A1P02458 XKRY-201ENST00000510392 1100 ntBASIC3.65□□□□□ -1.83
COL2A1P02458 RNU6-943P-201ENST00000516960 98 ntBASIC3.65□□□□□ -1.83
COL2A1P02458 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC3.65□□□□□ -1.83
COL2A1P02458 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC3.65□□□□□ -1.83
COL2A1P02458 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
COL2A1P02458 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC3.65□□□□□ -1.83
COL2A1P02458 AGGF1P4-201ENST00000568249 801 ntBASIC3.65□□□□□ -1.83
COL2A1P02458 MIR4789-201ENST00000577469 82 ntBASIC3.65□□□□□ -1.83
COL2A1P02458 RN7SL622P-201ENST00000585292 275 ntBASIC3.65□□□□□ -1.83
COL2A1P02458 AC073648.5-201ENST00000603502 305 ntBASIC3.65□□□□□ -1.83
COL2A1P02458 AC073114.1-201ENST00000612027 490 ntBASIC3.65□□□□□ -1.83
COL2A1P02458 AC087241.4-201ENST00000612441 480 ntBASIC3.65□□□□□ -1.83
COL2A1P02458 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.65□□□□□ -1.83
COL2A1P02458 RBM12B-AS1-201ENST00000623283 653 ntBASIC3.65□□□□□ -1.83
COL2A1P02458 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC3.65□□□□□ -1.83
COL2A1P02458 BX005019.1-201ENST00000561881 1810 ntBASIC3.65□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 97.6 ms