Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 AC017079.2-201ENST00000416102 485 ntBASIC3.56□□□□□ -1.84
PDGFBP01127 AC027644.1-201ENST00000419595 298 ntBASIC3.56□□□□□ -1.84
PDGFBP01127 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.56□□□□□ -1.84
PDGFBP01127 KCTD9P3-201ENST00000434597 1169 ntBASIC3.56□□□□□ -1.84
PDGFBP01127 COX6CP18-201ENST00000448769 222 ntBASIC3.56□□□□□ -1.84
PDGFBP01127 AC097262.1-201ENST00000452559 548 ntBASIC3.56□□□□□ -1.84
PDGFBP01127 MRPL42P4-201ENST00000453267 443 ntBASIC3.56□□□□□ -1.84
PDGFBP01127 HMGB1P15-201ENST00000453854 435 ntBASIC3.56□□□□□ -1.84
PDGFBP01127 RPS3AP43-201ENST00000479743 781 ntBASIC3.56□□□□□ -1.84
PDGFBP01127 HMGB3P15-201ENST00000507326 574 ntBASIC3.56□□□□□ -1.84
PDGFBP01127 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
PDGFBP01127 AC004062.1-201ENST00000509926 645 ntBASIC3.56□□□□□ -1.84
PDGFBP01127 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC3.56□□□□□ -1.84
PDGFBP01127 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC3.56□□□□□ -1.84
PDGFBP01127 AP001207.2-201ENST00000519490 539 ntBASIC3.56□□□□□ -1.84
PDGFBP01127 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC3.56□□□□□ -1.84
PDGFBP01127 AC022080.3-201ENST00000544433 482 ntBASIC3.56□□□□□ -1.84
PDGFBP01127 AC008127.2-201ENST00000549925 1075 ntBASIC3.56□□□□□ -1.84
PDGFBP01127 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC3.56□□□□□ -1.84
PDGFBP01127 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.56□□□□□ -1.84
PDGFBP01127 CKS1BP3-201ENST00000600888 237 ntBASIC3.56□□□□□ -1.84
PDGFBP01127 AC011468.4-201ENST00000603942 409 ntBASIC3.56□□□□□ -1.84
PDGFBP01127 AC124312.4-201ENST00000605533 310 ntBASIC3.56□□□□□ -1.84
PDGFBP01127 CYCSP41-201ENST00000616920 296 ntBASIC3.56□□□□□ -1.84
PDGFBP01127 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.56□□□□□ -1.84
PDGFBP01127 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC3.56□□□□□ -1.84
PDGFBP01127 AC233309.1-201ENST00000619522 751 ntBASIC3.56□□□□□ -1.84
PDGFBP01127 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC3.56□□□□□ -1.84
PDGFBP01127 U6.98-201ENST00000637157 84 ntBASIC3.56□□□□□ -1.84
PDGFBP01127 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
PDGFBP01127 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
PDGFBP01127 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC3.56□□□□□ -1.84
PDGFBP01127 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
PDGFBP01127 AC091152.2-201ENST00000591628 2569 ntBASIC3.56□□□□□ -1.84
PDGFBP01127 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
PDGFBP01127 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.55□□□□□ -1.84
PDGFBP01127 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC3.55□□□□□ -1.84
PDGFBP01127 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
PDGFBP01127 AL136164.4-201ENST00000625013 2135 ntBASIC3.55□□□□□ -1.84
PDGFBP01127 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
PDGFBP01127 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
PDGFBP01127 FRG1CP-201ENST00000358464 769 ntBASIC3.55□□□□□ -1.84
PDGFBP01127 SNORA51.6-201ENST00000384151 125 ntBASIC3.55□□□□□ -1.84
PDGFBP01127 MIR217-201ENST00000384817 110 ntBASIC3.55□□□□□ -1.84
PDGFBP01127 AL138878.1-201ENST00000405131 347 ntBASIC3.55□□□□□ -1.84
PDGFBP01127 RNU6-584P-201ENST00000410350 95 ntBASIC3.55□□□□□ -1.84
PDGFBP01127 AC063979.1-201ENST00000415539 377 ntBASIC3.55□□□□□ -1.84
PDGFBP01127 AC007390.1-201ENST00000415722 356 ntBASIC3.55□□□□□ -1.84
PDGFBP01127 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC3.55□□□□□ -1.84
PDGFBP01127 AC099677.1-201ENST00000420575 175 ntBASIC3.55□□□□□ -1.84
PDGFBP01127 MTCO3P1-205ENST00000422088 832 ntBASIC3.55□□□□□ -1.84
PDGFBP01127 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC3.55□□□□□ -1.84
PDGFBP01127 RPL31P54-201ENST00000429803 370 ntBASIC3.55□□□□□ -1.84
PDGFBP01127 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC3.55□□□□□ -1.84
PDGFBP01127 ELOCP8-201ENST00000439309 332 ntBASIC3.55□□□□□ -1.84
PDGFBP01127 ELOCP15-201ENST00000442090 332 ntBASIC3.55□□□□□ -1.84
PDGFBP01127 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.55□□□□□ -1.84
PDGFBP01127 AL606517.1-201ENST00000446914 387 ntBASIC3.55□□□□□ -1.84
PDGFBP01127 RPL31P61-201ENST00000496160 376 ntBASIC3.55□□□□□ -1.84
PDGFBP01127 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
PDGFBP01127 THAP6-203ENST00000502620 582 ntTSL 3 BASIC3.55□□□□□ -1.84
PDGFBP01127 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC3.55□□□□□ -1.84
PDGFBP01127 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC3.55□□□□□ -1.84
PDGFBP01127 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC3.55□□□□□ -1.84
PDGFBP01127 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
PDGFBP01127 RNU1-61P-201ENST00000516107 151 ntBASIC3.55□□□□□ -1.84
PDGFBP01127 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC3.55□□□□□ -1.84
PDGFBP01127 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC3.55□□□□□ -1.84
PDGFBP01127 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC3.55□□□□□ -1.84
PDGFBP01127 TRAV15-201ENST00000556680 249 ntBASIC3.55□□□□□ -1.84
PDGFBP01127 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC3.55□□□□□ -1.84
PDGFBP01127 MTND3P13-201ENST00000574391 343 ntBASIC3.55□□□□□ -1.84
PDGFBP01127 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC3.55□□□□□ -1.84
PDGFBP01127 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC3.55□□□□□ -1.84
PDGFBP01127 AC136601.2-201ENST00000604356 474 ntBASIC3.55□□□□□ -1.84
PDGFBP01127 RNU4-5P-201ENST00000607255 135 ntBASIC3.55□□□□□ -1.84
PDGFBP01127 AC009974.1-201ENST00000608881 455 ntBASIC3.55□□□□□ -1.84
PDGFBP01127 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
PDGFBP01127 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC3.55□□□□□ -1.84
PDGFBP01127 XIST_intron.1-201ENST00000619444 68 ntBASIC3.55□□□□□ -1.84
PDGFBP01127 AC018755.4-201ENST00000619715 454 ntBASIC3.55□□□□□ -1.84
PDGFBP01127 AC123767.1-202ENST00000620407 817 ntBASIC3.55□□□□□ -1.84
PDGFBP01127 RBM12B-AS1-201ENST00000623283 653 ntBASIC3.55□□□□□ -1.84
PDGFBP01127 AL078595.3-201ENST00000623815 1166 ntBASIC3.55□□□□□ -1.84
PDGFBP01127 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC3.55□□□□□ -1.84
PDGFBP01127 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC3.55□□□□□ -1.84
PDGFBP01127 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC3.55□□□□□ -1.84
PDGFBP01127 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
PDGFBP01127 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
PDGFBP01127 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
PDGFBP01127 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC3.55□□□□□ -1.84
PDGFBP01127 AC058791.1-201ENST00000608412 3198 ntBASIC3.55□□□□□ -1.84
PDGFBP01127 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
PDGFBP01127 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
PDGFBP01127 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
PDGFBP01127 AC105074.1-201ENST00000623380 3095 ntBASIC3.54□□□□□ -1.84
PDGFBP01127 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
PDGFBP01127 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.54□□□□□ -1.84
PDGFBP01127 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC3.54□□□□□ -1.84
PDGFBP01127 AL136133.1-201ENST00000413694 376 ntBASIC3.54□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms