Protein–RNA interactions for Protein: O95025

SEMA3D, Semaphorin-3D, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3DO95025 AC078857.1-201ENST00000469870 667 ntBASIC2.9□□□□□ -1.95
SEMA3DO95025 AC017015.1-201ENST00000477387 286 ntBASIC2.9□□□□□ -1.95
SEMA3DO95025 RPS4XP6-201ENST00000477670 797 ntBASIC2.9□□□□□ -1.95
SEMA3DO95025 RN7SL499P-201ENST00000481141 276 ntBASIC2.9□□□□□ -1.95
SEMA3DO95025 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC2.9□□□□□ -1.95
SEMA3DO95025 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
SEMA3DO95025 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC2.9□□□□□ -1.95
SEMA3DO95025 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC2.9□□□□□ -1.95
SEMA3DO95025 MTND2P31-201ENST00000512602 616 ntBASIC2.9□□□□□ -1.95
SEMA3DO95025 RNU6-488P-201ENST00000515918 99 ntBASIC2.9□□□□□ -1.95
SEMA3DO95025 SNORA31.1-201ENST00000515993 133 ntBASIC2.9□□□□□ -1.95
SEMA3DO95025 SNORA31.5-201ENST00000516190 133 ntBASIC2.9□□□□□ -1.95
SEMA3DO95025 IGKV2D-36-201ENST00000518643 226 ntBASIC2.9□□□□□ -1.95
SEMA3DO95025 HIGD1AP6-201ENST00000521833 279 ntBASIC2.9□□□□□ -1.95
SEMA3DO95025 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC2.9□□□□□ -1.95
SEMA3DO95025 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC2.9□□□□□ -1.95
SEMA3DO95025 CASP1-212ENST00000531166 300 ntTSL 5 BASIC2.9□□□□□ -1.95
SEMA3DO95025 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
SEMA3DO95025 DNAJC8P1-201ENST00000554535 372 ntBASIC2.9□□□□□ -1.95
SEMA3DO95025 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC2.9□□□□□ -1.95
SEMA3DO95025 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC2.9□□□□□ -1.95
SEMA3DO95025 OR4G1P-201ENST00000588632 938 ntBASIC2.9□□□□□ -1.95
SEMA3DO95025 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC2.9□□□□□ -1.95
SEMA3DO95025 AL031985.2-201ENST00000600955 480 ntBASIC2.9□□□□□ -1.95
SEMA3DO95025 AC005776.1-201ENST00000603164 290 ntBASIC2.9□□□□□ -1.95
SEMA3DO95025 AC012119.1-201ENST00000603184 222 ntBASIC2.9□□□□□ -1.95
SEMA3DO95025 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC2.9□□□□□ -1.95
SEMA3DO95025 AL009028.1-201ENST00000604895 802 ntBASIC2.9□□□□□ -1.95
SEMA3DO95025 AC026741.1-201ENST00000605892 482 ntBASIC2.9□□□□□ -1.95
SEMA3DO95025 AL512506.1-201ENST00000613918 449 ntBASIC2.9□□□□□ -1.95
SEMA3DO95025 AL162574.2-201ENST00000614618 657 ntBASIC2.9□□□□□ -1.95
SEMA3DO95025 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC2.9□□□□□ -1.95
SEMA3DO95025 AC073348.1-201ENST00000623002 331 ntBASIC2.9□□□□□ -1.95
SEMA3DO95025 AC073592.7-201ENST00000623659 507 ntBASIC2.9□□□□□ -1.95
SEMA3DO95025 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC2.9□□□□□ -1.95
SEMA3DO95025 AL359893.1-201ENST00000447628 1580 ntBASIC2.9□□□□□ -1.95
SEMA3DO95025 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.9□□□□□ -1.95
SEMA3DO95025 ZNF37BP-203ENST00000452306 1352 ntBASIC2.89□□□□□ -1.95
SEMA3DO95025 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.89□□□□□ -1.95
SEMA3DO95025 SNORA14A-201ENST00000364773 135 ntBASIC2.89□□□□□ -1.95
SEMA3DO95025 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC2.89□□□□□ -1.95
SEMA3DO95025 AL009174.1-201ENST00000426577 416 ntBASIC2.89□□□□□ -1.95
SEMA3DO95025 MTATP6P4-201ENST00000427725 675 ntBASIC2.89□□□□□ -1.95
SEMA3DO95025 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC2.89□□□□□ -1.95
SEMA3DO95025 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC2.89□□□□□ -1.95
SEMA3DO95025 SAGE4P-201ENST00000442271 3381 ntBASIC2.89□□□□□ -1.95
SEMA3DO95025 GXYLT1P1-201ENST00000446657 490 ntBASIC2.89□□□□□ -1.95
SEMA3DO95025 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC2.89□□□□□ -1.95
SEMA3DO95025 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC2.89□□□□□ -1.95
SEMA3DO95025 RN7SL633P-201ENST00000488974 297 ntBASIC2.89□□□□□ -1.95
SEMA3DO95025 HMGB1P22-201ENST00000505315 124 ntBASIC2.89□□□□□ -1.95
SEMA3DO95025 AC112518.2-201ENST00000508565 425 ntBASIC2.89□□□□□ -1.95
SEMA3DO95025 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC2.89□□□□□ -1.95
SEMA3DO95025 AC027338.1-201ENST00000514840 825 ntBASIC2.89□□□□□ -1.95
SEMA3DO95025 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC2.89□□□□□ -1.95
SEMA3DO95025 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC2.89□□□□□ -1.95
SEMA3DO95025 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC2.89□□□□□ -1.95
SEMA3DO95025 SETP2-201ENST00000553886 926 ntBASIC2.89□□□□□ -1.95
SEMA3DO95025 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC2.89□□□□□ -1.95
SEMA3DO95025 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC2.89□□□□□ -1.95
SEMA3DO95025 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC2.89□□□□□ -1.95
SEMA3DO95025 AC098483.2-201ENST00000603158 454 ntBASIC2.89□□□□□ -1.95
SEMA3DO95025 AC007566.2-201ENST00000603642 413 ntBASIC2.89□□□□□ -1.95
SEMA3DO95025 AC009220.3-201ENST00000604318 586 ntBASIC2.89□□□□□ -1.95
SEMA3DO95025 AC124312.4-201ENST00000605533 310 ntBASIC2.89□□□□□ -1.95
SEMA3DO95025 YPEL5P2-201ENST00000605553 359 ntBASIC2.89□□□□□ -1.95
SEMA3DO95025 AL359198.2-201ENST00000611836 194 ntBASIC2.89□□□□□ -1.95
SEMA3DO95025 AL110115.1-201ENST00000614396 364 ntBASIC2.89□□□□□ -1.95
SEMA3DO95025 AC020923.1-201ENST00000624021 917 ntBASIC2.89□□□□□ -1.95
SEMA3DO95025 LRRC77P-213ENST00000637727 880 ntBASIC2.89□□□□□ -1.95
SEMA3DO95025 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC2.89□□□□□ -1.95
SEMA3DO95025 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC2.89□□□□□ -1.95
SEMA3DO95025 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC2.89□□□□□ -1.95
SEMA3DO95025 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC2.89□□□□□ -1.95
SEMA3DO95025 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
SEMA3DO95025 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
SEMA3DO95025 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
SEMA3DO95025 MTCO1P6-201ENST00000481192 1384 ntBASIC2.88□□□□□ -1.95
SEMA3DO95025 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.88□□□□□ -1.95
SEMA3DO95025 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC2.88□□□□□ -1.95
SEMA3DO95025 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
SEMA3DO95025 AL355596.1-201ENST00000565399 3996 ntBASIC2.88□□□□□ -1.95
SEMA3DO95025 MIR22-201ENST00000362190 85 ntBASIC2.88□□□□□ -1.95
SEMA3DO95025 RNU6-1027P-201ENST00000383998 107 ntBASIC2.88□□□□□ -1.95
SEMA3DO95025 RPL21P75-201ENST00000396599 483 ntBASIC2.88□□□□□ -1.95
SEMA3DO95025 RPL21P28-201ENST00000401418 483 ntBASIC2.88□□□□□ -1.95
SEMA3DO95025 AL592114.1-201ENST00000403842 483 ntBASIC2.88□□□□□ -1.95
SEMA3DO95025 RN7SKP220-201ENST00000410611 288 ntBASIC2.88□□□□□ -1.95
SEMA3DO95025 BX664727.1-201ENST00000416024 466 ntBASIC2.88□□□□□ -1.95
SEMA3DO95025 AC008280.1-201ENST00000418851 412 ntBASIC2.88□□□□□ -1.95
SEMA3DO95025 MTCO2P1-201ENST00000424648 477 ntBASIC2.88□□□□□ -1.95
SEMA3DO95025 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.88□□□□□ -1.95
SEMA3DO95025 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC2.88□□□□□ -1.95
SEMA3DO95025 MTATP6P11-201ENST00000428071 670 ntBASIC2.88□□□□□ -1.95
SEMA3DO95025 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
SEMA3DO95025 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC2.88□□□□□ -1.95
SEMA3DO95025 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC2.88□□□□□ -1.95
SEMA3DO95025 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC2.88□□□□□ -1.95
SEMA3DO95025 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC2.88□□□□□ -1.95
SEMA3DO95025 RPL23AP58-201ENST00000440453 469 ntBASIC2.88□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 111.1 ms