Protein–RNA interactions for Protein: O60391

GRIN3B, Glutamate receptor ionotropic, NMDA 3B, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIN3BO60391 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC5.68□□□□□ -1.5
GRIN3BO60391 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC5.68□□□□□ -1.5
GRIN3BO60391 SNORA51-201ENST00000606420 132 ntBASIC5.68□□□□□ -1.5
GRIN3BO60391 MIR6867-201ENST00000610636 67 ntBASIC5.68□□□□□ -1.5
GRIN3BO60391 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC5.68□□□□□ -1.5
GRIN3BO60391 PART1_1.1-201ENST00000611761 217 ntBASIC5.68□□□□□ -1.5
GRIN3BO60391 CYP3A51P-201ENST00000633513 256 ntBASIC5.68□□□□□ -1.5
GRIN3BO60391 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
GRIN3BO60391 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
GRIN3BO60391 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
GRIN3BO60391 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC5.68□□□□□ -1.5
GRIN3BO60391 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
GRIN3BO60391 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC5.68□□□□□ -1.5
GRIN3BO60391 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
GRIN3BO60391 AP002512.4-202ENST00000641599 4530 ntBASIC5.67□□□□□ -1.5
GRIN3BO60391 EIF2AP4-201ENST00000424793 1781 ntBASIC5.67□□□□□ -1.5
GRIN3BO60391 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC5.67□□□□□ -1.5
GRIN3BO60391 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
GRIN3BO60391 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
GRIN3BO60391 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC5.67□□□□□ -1.5
GRIN3BO60391 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
GRIN3BO60391 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
GRIN3BO60391 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
GRIN3BO60391 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
GRIN3BO60391 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC5.67□□□□□ -1.5
GRIN3BO60391 RNA5SP119-201ENST00000362715 117 ntBASIC5.67□□□□□ -1.5
GRIN3BO60391 RNU6-451P-201ENST00000362921 107 ntBASIC5.67□□□□□ -1.5
GRIN3BO60391 RNU4-1-201ENST00000363925 141 ntBASIC5.67□□□□□ -1.5
GRIN3BO60391 EIF1P3-201ENST00000423841 334 ntBASIC5.67□□□□□ -1.5
GRIN3BO60391 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC5.67□□□□□ -1.5
GRIN3BO60391 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC5.67□□□□□ -1.5
GRIN3BO60391 GTF2IP20-201ENST00000431663 360 ntBASIC5.67□□□□□ -1.5
GRIN3BO60391 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC5.67□□□□□ -1.5
GRIN3BO60391 AC092013.1-201ENST00000438795 332 ntBASIC5.67□□□□□ -1.5
GRIN3BO60391 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC5.67□□□□□ -1.5
GRIN3BO60391 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC5.67□□□□□ -1.5
GRIN3BO60391 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC5.67□□□□□ -1.5
GRIN3BO60391 APOOP2-201ENST00000461561 539 ntBASIC5.67□□□□□ -1.5
GRIN3BO60391 AC087879.1-201ENST00000474343 374 ntBASIC5.67□□□□□ -1.5
GRIN3BO60391 VN1R105P-201ENST00000486595 910 ntBASIC5.67□□□□□ -1.5
GRIN3BO60391 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC5.67□□□□□ -1.5
GRIN3BO60391 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC5.67□□□□□ -1.5
GRIN3BO60391 PANCR-202ENST00000513690 448 ntTSL 2 BASIC5.67□□□□□ -1.5
GRIN3BO60391 SNORA70.24-201ENST00000517233 118 ntBASIC5.67□□□□□ -1.5
GRIN3BO60391 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC5.67□□□□□ -1.5
GRIN3BO60391 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC5.67□□□□□ -1.5
GRIN3BO60391 HIF1AP1-201ENST00000553642 175 ntBASIC5.67□□□□□ -1.5
GRIN3BO60391 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC5.67□□□□□ -1.5
GRIN3BO60391 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC5.67□□□□□ -1.5
GRIN3BO60391 MTCYBP13-201ENST00000578634 1093 ntBASIC5.67□□□□□ -1.5
GRIN3BO60391 MIR3167-201ENST00000579623 85 ntBASIC5.67□□□□□ -1.5
GRIN3BO60391 MIR3200-201ENST00000580767 85 ntBASIC5.67□□□□□ -1.5
GRIN3BO60391 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC5.67□□□□□ -1.5
GRIN3BO60391 RPL7P50-201ENST00000600588 727 ntBASIC5.67□□□□□ -1.5
GRIN3BO60391 SRGNP1-201ENST00000603392 451 ntBASIC5.67□□□□□ -1.5
GRIN3BO60391 YWHAEP7-203ENST00000622054 312 ntBASIC5.67□□□□□ -1.5
GRIN3BO60391 AC009161.2-201ENST00000624626 138 ntBASIC5.67□□□□□ -1.5
GRIN3BO60391 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC5.67□□□□□ -1.5
GRIN3BO60391 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC5.67□□□□□ -1.5
GRIN3BO60391 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
GRIN3BO60391 MTND5P28-201ENST00000438005 1594 ntBASIC5.67□□□□□ -1.5
GRIN3BO60391 CKAP2P1-201ENST00000555477 2049 ntBASIC5.67□□□□□ -1.5
GRIN3BO60391 LINC00622-201ENST00000562811 1570 ntBASIC5.67□□□□□ -1.5
GRIN3BO60391 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC5.67□□□□□ -1.5
GRIN3BO60391 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
GRIN3BO60391 LARP1BP1-201ENST00000506036 1359 ntBASIC5.67□□□□□ -1.5
GRIN3BO60391 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
GRIN3BO60391 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC5.66□□□□□ -1.5
GRIN3BO60391 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
GRIN3BO60391 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC5.66□□□□□ -1.5
GRIN3BO60391 NMD3P1-201ENST00000439704 1488 ntBASIC5.66□□□□□ -1.5
GRIN3BO60391 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
GRIN3BO60391 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC5.66□□□□□ -1.5
GRIN3BO60391 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC5.66□□□□□ -1.5
GRIN3BO60391 OR52B1P-201ENST00000316506 909 ntBASIC5.66□□□□□ -1.5
GRIN3BO60391 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
GRIN3BO60391 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
GRIN3BO60391 MIR659-201ENST00000384963 97 ntBASIC5.66□□□□□ -1.5
GRIN3BO60391 RPL31P1-201ENST00000398116 372 ntBASIC5.66□□□□□ -1.5
GRIN3BO60391 AL359704.1-201ENST00000411586 781 ntBASIC5.66□□□□□ -1.5
GRIN3BO60391 SNRPFP1-201ENST00000414761 252 ntBASIC5.66□□□□□ -1.5
GRIN3BO60391 AC093578.1-201ENST00000415219 368 ntBASIC5.66□□□□□ -1.5
GRIN3BO60391 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC5.66□□□□□ -1.5
GRIN3BO60391 SDCBPP3-201ENST00000419629 891 ntBASIC5.66□□□□□ -1.5
GRIN3BO60391 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC5.66□□□□□ -1.5
GRIN3BO60391 AL451139.1-201ENST00000434718 346 ntBASIC5.66□□□□□ -1.5
GRIN3BO60391 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC5.66□□□□□ -1.5
GRIN3BO60391 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC5.66□□□□□ -1.5
GRIN3BO60391 MTND1P18-201ENST00000448191 573 ntBASIC5.66□□□□□ -1.5
GRIN3BO60391 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC5.66□□□□□ -1.5
GRIN3BO60391 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC5.66□□□□□ -1.5
GRIN3BO60391 AC139783.2-201ENST00000504847 1145 ntBASIC5.66□□□□□ -1.5
GRIN3BO60391 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC5.66□□□□□ -1.5
GRIN3BO60391 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC5.66□□□□□ -1.5
GRIN3BO60391 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC5.66□□□□□ -1.5
GRIN3BO60391 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
GRIN3BO60391 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC5.66□□□□□ -1.5
GRIN3BO60391 ARL2BPP2-201ENST00000550907 489 ntBASIC5.66□□□□□ -1.5
GRIN3BO60391 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC5.66□□□□□ -1.5
GRIN3BO60391 AC040958.1-201ENST00000561102 201 ntBASIC5.66□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms