Protein–RNA interactions for Protein: O60294

LCMT2, tRNA wybutosine-synthesizing protein 4, humanhuman

Known RBP Predictions only

Length 686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT2O60294 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC3.28□□□□□ -1.88
LCMT2O60294 AC074050.1-201ENST00000563247 211 ntBASIC3.28□□□□□ -1.88
LCMT2O60294 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.28□□□□□ -1.88
LCMT2O60294 MIR5186-201ENST00000577504 120 ntBASIC3.28□□□□□ -1.88
LCMT2O60294 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC3.28□□□□□ -1.88
LCMT2O60294 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC3.28□□□□□ -1.88
LCMT2O60294 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.28□□□□□ -1.88
LCMT2O60294 RPP40P2-201ENST00000603596 712 ntBASIC3.28□□□□□ -1.88
LCMT2O60294 AC092354.2-201ENST00000607786 514 ntBASIC3.28□□□□□ -1.88
LCMT2O60294 AC106052.1-201ENST00000608029 497 ntBASIC3.28□□□□□ -1.88
LCMT2O60294 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC3.28□□□□□ -1.88
LCMT2O60294 AC018755.4-201ENST00000619715 454 ntBASIC3.28□□□□□ -1.88
LCMT2O60294 AC092650.2-201ENST00000619984 902 ntBASIC3.28□□□□□ -1.88
LCMT2O60294 OR1S1-201ENST00000624470 978 ntBASIC3.28□□□□□ -1.88
LCMT2O60294 AL512506.2-201ENST00000624472 458 ntBASIC3.28□□□□□ -1.88
LCMT2O60294 AC005183.1-201ENST00000603687 1979 ntBASIC3.28□□□□□ -1.88
LCMT2O60294 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.28□□□□□ -1.88
LCMT2O60294 AL513302.2-201ENST00000562313 1842 ntBASIC3.28□□□□□ -1.88
LCMT2O60294 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.28□□□□□ -1.88
LCMT2O60294 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.28□□□□□ -1.88
LCMT2O60294 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC3.28□□□□□ -1.88
LCMT2O60294 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC3.28□□□□□ -1.89
LCMT2O60294 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
LCMT2O60294 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC3.27□□□□□ -1.89
LCMT2O60294 SNORD82-201ENST00000365530 70 ntBASIC3.27□□□□□ -1.89
LCMT2O60294 SUGT1P1-201ENST00000379514 476 ntBASIC3.27□□□□□ -1.89
LCMT2O60294 RNU6-657P-201ENST00000383904 107 ntBASIC3.27□□□□□ -1.89
LCMT2O60294 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC3.27□□□□□ -1.89
LCMT2O60294 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC3.27□□□□□ -1.89
LCMT2O60294 AL356320.2-201ENST00000417263 507 ntBASIC3.27□□□□□ -1.89
LCMT2O60294 MTCO3P1-205ENST00000422088 832 ntBASIC3.27□□□□□ -1.89
LCMT2O60294 AL389915.1-201ENST00000422463 466 ntBASIC3.27□□□□□ -1.89
LCMT2O60294 AP000907.1-201ENST00000428428 510 ntBASIC3.27□□□□□ -1.89
LCMT2O60294 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC3.27□□□□□ -1.89
LCMT2O60294 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC3.27□□□□□ -1.89
LCMT2O60294 AC241584.1-201ENST00000438469 1241 ntBASIC3.27□□□□□ -1.89
LCMT2O60294 AL606517.1-201ENST00000446914 387 ntBASIC3.27□□□□□ -1.89
LCMT2O60294 AL589880.1-201ENST00000448271 287 ntBASIC3.27□□□□□ -1.89
LCMT2O60294 PTGES3P5-201ENST00000455109 434 ntBASIC3.27□□□□□ -1.89
LCMT2O60294 MTCO3P2-201ENST00000457365 171 ntBASIC3.27□□□□□ -1.89
LCMT2O60294 PABPC1P3-201ENST00000469174 459 ntBASIC3.27□□□□□ -1.89
LCMT2O60294 AC108078.3-201ENST00000502633 489 ntBASIC3.27□□□□□ -1.89
LCMT2O60294 AC113347.3-201ENST00000509113 148 ntBASIC3.27□□□□□ -1.89
LCMT2O60294 PCBP2P3-201ENST00000509726 843 ntBASIC3.27□□□□□ -1.89
LCMT2O60294 PHBP14-201ENST00000512887 367 ntBASIC3.27□□□□□ -1.89
LCMT2O60294 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.27□□□□□ -1.89
LCMT2O60294 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC3.27□□□□□ -1.89
LCMT2O60294 AP001372.4-201ENST00000524889 472 ntBASIC3.27□□□□□ -1.89
LCMT2O60294 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC3.27□□□□□ -1.89
LCMT2O60294 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.27□□□□□ -1.89
LCMT2O60294 AC126177.3-201ENST00000551839 688 ntBASIC3.27□□□□□ -1.89
LCMT2O60294 AL132857.1-201ENST00000555180 708 ntBASIC3.27□□□□□ -1.89
LCMT2O60294 CFL2-206ENST00000556161 546 ntTSL 4 BASIC3.27□□□□□ -1.89
LCMT2O60294 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC3.27□□□□□ -1.89
LCMT2O60294 AC023813.2-201ENST00000564321 469 ntBASIC3.27□□□□□ -1.89
LCMT2O60294 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC3.27□□□□□ -1.89
LCMT2O60294 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC3.27□□□□□ -1.89
LCMT2O60294 AL035411.2-201ENST00000604022 421 ntBASIC3.27□□□□□ -1.89
LCMT2O60294 AC105148.1-201ENST00000604961 409 ntBASIC3.27□□□□□ -1.89
LCMT2O60294 MIR92B-201ENST00000607575 96 ntBASIC3.27□□□□□ -1.89
LCMT2O60294 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC3.27□□□□□ -1.89
LCMT2O60294 AC009974.1-201ENST00000608881 455 ntBASIC3.27□□□□□ -1.89
LCMT2O60294 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC3.27□□□□□ -1.89
LCMT2O60294 AC092954.1-201ENST00000609121 445 ntBASIC3.27□□□□□ -1.89
LCMT2O60294 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.27□□□□□ -1.89
LCMT2O60294 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC3.27□□□□□ -1.89
LCMT2O60294 AC009318.4-201ENST00000620496 486 ntBASIC3.27□□□□□ -1.89
LCMT2O60294 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC3.27□□□□□ -1.89
LCMT2O60294 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
LCMT2O60294 AC026634.1-201ENST00000634369 198 ntBASIC3.27□□□□□ -1.89
LCMT2O60294 Z99496.1-201ENST00000469424 1477 ntBASIC3.27□□□□□ -1.89
LCMT2O60294 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.27□□□□□ -1.89
LCMT2O60294 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
LCMT2O60294 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.27□□□□□ -1.89
LCMT2O60294 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.27□□□□□ -1.89
LCMT2O60294 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.26□□□□□ -1.89
LCMT2O60294 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC3.26□□□□□ -1.89
LCMT2O60294 DBF4P1-201ENST00000412976 1892 ntBASIC3.26□□□□□ -1.89
LCMT2O60294 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
LCMT2O60294 AC116096.1-201ENST00000566804 2314 ntBASIC3.26□□□□□ -1.89
LCMT2O60294 AL356274.2-201ENST00000624379 3752 ntBASIC3.26□□□□□ -1.89
LCMT2O60294 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.26□□□□□ -1.89
LCMT2O60294 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.26□□□□□ -1.89
LCMT2O60294 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
LCMT2O60294 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.26□□□□□ -1.89
LCMT2O60294 RNA5SP197-201ENST00000363357 119 ntBASIC3.26□□□□□ -1.89
LCMT2O60294 RNA5SP50-201ENST00000363731 107 ntBASIC3.26□□□□□ -1.89
LCMT2O60294 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
LCMT2O60294 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
LCMT2O60294 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
LCMT2O60294 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
LCMT2O60294 RNA5SP171-201ENST00000391071 115 ntBASIC3.26□□□□□ -1.89
LCMT2O60294 AL136310.1-201ENST00000404926 654 ntBASIC3.26□□□□□ -1.89
LCMT2O60294 RN7SKP111-201ENST00000410349 271 ntBASIC3.26□□□□□ -1.89
LCMT2O60294 AL133384.1-201ENST00000412744 351 ntBASIC3.26□□□□□ -1.89
LCMT2O60294 BX323014.1-201ENST00000412876 237 ntBASIC3.26□□□□□ -1.89
LCMT2O60294 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC3.26□□□□□ -1.89
LCMT2O60294 Z99755.1-201ENST00000414048 380 ntBASIC3.26□□□□□ -1.89
LCMT2O60294 MTATP6P20-201ENST00000414147 562 ntBASIC3.26□□□□□ -1.89
LCMT2O60294 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC3.26□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 143.9 ms