Protein–RNA interactions for Protein: O43805

SSNA1, Sjoegren syndrome nuclear autoantigen 1, humanhuman

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1O43805 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
SSNA1O43805 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
SSNA1O43805 AL035425.3-201ENST00000564206 4996 ntBASIC2.4□□□□□ -2.03
SSNA1O43805 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC2.39□□□□□ -2.03
SSNA1O43805 AC025263.3-201ENST00000622965 1396 ntBASIC2.39□□□□□ -2.03
SSNA1O43805 AC007342.9-201ENST00000623877 1385 ntBASIC2.39□□□□□ -2.03
SSNA1O43805 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC2.39□□□□□ -2.03
SSNA1O43805 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.39□□□□□ -2.03
SSNA1O43805 NACA3P-201ENST00000359690 648 ntBASIC2.39□□□□□ -2.03
SSNA1O43805 SNORD115-48-201ENST00000364764 76 ntBASIC2.39□□□□□ -2.03
SSNA1O43805 SNORD82-201ENST00000365530 70 ntBASIC2.39□□□□□ -2.03
SSNA1O43805 U3.29-201ENST00000391296 212 ntBASIC2.39□□□□□ -2.03
SSNA1O43805 RNA5SP181-201ENST00000410246 98 ntBASIC2.39□□□□□ -2.03
SSNA1O43805 CYCSP19-201ENST00000411715 316 ntBASIC2.39□□□□□ -2.03
SSNA1O43805 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC2.39□□□□□ -2.03
SSNA1O43805 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC2.39□□□□□ -2.03
SSNA1O43805 RPL7P2-201ENST00000427639 268 ntBASIC2.39□□□□□ -2.03
SSNA1O43805 NDUFB4P6-201ENST00000436819 366 ntBASIC2.39□□□□□ -2.03
SSNA1O43805 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC2.39□□□□□ -2.03
SSNA1O43805 RPS29P33-201ENST00000456717 146 ntBASIC2.39□□□□□ -2.03
SSNA1O43805 PABPC1P3-201ENST00000469174 459 ntBASIC2.39□□□□□ -2.03
SSNA1O43805 AC003982.1-202ENST00000469928 248 ntBASIC2.39□□□□□ -2.03
SSNA1O43805 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
SSNA1O43805 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC2.39□□□□□ -2.03
SSNA1O43805 SNORA70.16-201ENST00000516390 95 ntBASIC2.39□□□□□ -2.03
SSNA1O43805 RN7SKP40-201ENST00000517211 242 ntBASIC2.39□□□□□ -2.03
SSNA1O43805 AC090136.1-201ENST00000520009 240 ntBASIC2.39□□□□□ -2.03
SSNA1O43805 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC2.39□□□□□ -2.03
SSNA1O43805 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC2.39□□□□□ -2.03
SSNA1O43805 RPL21P12-201ENST00000559810 515 ntBASIC2.39□□□□□ -2.03
SSNA1O43805 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC2.39□□□□□ -2.03
SSNA1O43805 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC2.39□□□□□ -2.03
SSNA1O43805 MIR4310-201ENST00000582950 57 ntBASIC2.39□□□□□ -2.03
SSNA1O43805 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC2.39□□□□□ -2.03
SSNA1O43805 VN1R88P-201ENST00000596787 292 ntBASIC2.39□□□□□ -2.03
SSNA1O43805 AL445423.1-201ENST00000609941 536 ntBASIC2.39□□□□□ -2.03
SSNA1O43805 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC2.39□□□□□ -2.03
SSNA1O43805 AP006248.3-201ENST00000623580 594 ntBASIC2.39□□□□□ -2.03
SSNA1O43805 AC010297.1-201ENST00000623948 149 ntBASIC2.39□□□□□ -2.03
SSNA1O43805 CR381653.2-201ENST00000624041 768 ntBASIC2.39□□□□□ -2.03
SSNA1O43805 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC2.39□□□□□ -2.03
SSNA1O43805 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.39□□□□□ -2.03
SSNA1O43805 OFD1P6Y-202ENST00000451061 2724 ntBASIC2.39□□□□□ -2.03
SSNA1O43805 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
SSNA1O43805 AP000526.1-201ENST00000603308 1388 ntBASIC2.38□□□□□ -2.03
SSNA1O43805 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
SSNA1O43805 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
SSNA1O43805 MIR6073-201ENST00000352083 89 ntBASIC2.38□□□□□ -2.03
SSNA1O43805 MIR22-201ENST00000362190 85 ntBASIC2.38□□□□□ -2.03
SSNA1O43805 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
SSNA1O43805 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC2.38□□□□□ -2.03
SSNA1O43805 AC233981.1-201ENST00000423224 461 ntBASIC2.38□□□□□ -2.03
SSNA1O43805 AC245028.1-201ENST00000423259 256 ntBASIC2.38□□□□□ -2.03
SSNA1O43805 MTND4P24-201ENST00000424002 397 ntBASIC2.38□□□□□ -2.03
SSNA1O43805 EZH2P1-201ENST00000431167 291 ntBASIC2.38□□□□□ -2.03
SSNA1O43805 UBE2V2P3-201ENST00000433562 437 ntBASIC2.38□□□□□ -2.03
SSNA1O43805 AC092641.1-201ENST00000440229 772 ntBASIC2.38□□□□□ -2.03
SSNA1O43805 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC2.38□□□□□ -2.03
SSNA1O43805 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC2.38□□□□□ -2.03
SSNA1O43805 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC2.38□□□□□ -2.03
SSNA1O43805 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
SSNA1O43805 LINC02382-201ENST00000515840 614 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
SSNA1O43805 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC2.38□□□□□ -2.03
SSNA1O43805 OR7K1P-201ENST00000546439 926 ntBASIC2.38□□□□□ -2.03
SSNA1O43805 MIR5186-201ENST00000577504 120 ntBASIC2.38□□□□□ -2.03
SSNA1O43805 AC090616.3-201ENST00000582184 217 ntBASIC2.38□□□□□ -2.03
SSNA1O43805 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC2.38□□□□□ -2.03
SSNA1O43805 AC015871.2-201ENST00000603605 948 ntBASIC2.38□□□□□ -2.03
SSNA1O43805 AL160237.3-201ENST00000604114 1013 ntBASIC2.38□□□□□ -2.03
SSNA1O43805 BNIP3P4-201ENST00000604946 565 ntBASIC2.38□□□□□ -2.03
SSNA1O43805 AC024940.4-201ENST00000605507 246 ntBASIC2.38□□□□□ -2.03
SSNA1O43805 AC055876.5-201ENST00000605667 259 ntBASIC2.38□□□□□ -2.03
SSNA1O43805 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC2.38□□□□□ -2.03
SSNA1O43805 AC073569.3-201ENST00000619055 682 ntBASIC2.38□□□□□ -2.03
SSNA1O43805 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC2.38□□□□□ -2.03
SSNA1O43805 MIR622-201ENST00000638396 96 ntBASIC2.38□□□□□ -2.03
SSNA1O43805 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
SSNA1O43805 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
SSNA1O43805 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC2.38□□□□□ -2.03
SSNA1O43805 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
SSNA1O43805 ZNF271P-202ENST00000465539 1970 ntBASIC2.38□□□□□ -2.03
SSNA1O43805 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
SSNA1O43805 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC2.37□□□□□ -2.03
SSNA1O43805 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.37□□□□□ -2.03
SSNA1O43805 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
SSNA1O43805 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.37□□□□□ -2.03
SSNA1O43805 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
SSNA1O43805 SNORA9.2-201ENST00000365361 133 ntBASIC2.37□□□□□ -2.03
SSNA1O43805 C1orf194-202ENST00000369945 534 ntTSL 5 BASIC2.37□□□□□ -2.03
SSNA1O43805 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
SSNA1O43805 MIR627-201ENST00000384979 97 ntBASIC2.37□□□□□ -2.03
SSNA1O43805 AL136372.1-201ENST00000403060 228 ntBASIC2.37□□□□□ -2.03
SSNA1O43805 ZNF736P10Y-201ENST00000403990 1110 ntBASIC2.37□□□□□ -2.03
SSNA1O43805 UQCRFS1P3-201ENST00000407697 385 ntBASIC2.37□□□□□ -2.03
SSNA1O43805 ZNF92P1Y-201ENST00000415010 1191 ntBASIC2.37□□□□□ -2.03
SSNA1O43805 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC2.37□□□□□ -2.03
SSNA1O43805 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC2.37□□□□□ -2.03
SSNA1O43805 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC2.37□□□□□ -2.03
SSNA1O43805 AL589880.1-201ENST00000448271 287 ntBASIC2.37□□□□□ -2.03
SSNA1O43805 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC2.37□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms