Protein–RNA interactions for Protein: O43300

LRRTM2, Leucine-rich repeat transmembrane neuronal protein 2, humanhuman

Predictions only

Length 516 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM2O43300 AC068787.1-201ENST00000623908 691 ntBASIC3.38□□□□□ -1.87
LRRTM2O43300 SCARNA15.3-201ENST00000626315 122 ntBASIC3.38□□□□□ -1.87
LRRTM2O43300 SCARNA4.1-201ENST00000628597 123 ntBASIC3.38□□□□□ -1.87
LRRTM2O43300 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
LRRTM2O43300 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC3.38□□□□□ -1.87
LRRTM2O43300 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC3.38□□□□□ -1.87
LRRTM2O43300 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.38□□□□□ -1.87
LRRTM2O43300 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC3.38□□□□□ -1.87
LRRTM2O43300 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC3.38□□□□□ -1.87
LRRTM2O43300 MTND5P31-201ENST00000419366 1374 ntBASIC3.38□□□□□ -1.87
LRRTM2O43300 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
LRRTM2O43300 AC099786.3-201ENST00000565735 1410 ntBASIC3.37□□□□□ -1.87
LRRTM2O43300 THUMPD3P1-201ENST00000506556 1480 ntBASIC3.37□□□□□ -1.87
LRRTM2O43300 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.37□□□□□ -1.87
LRRTM2O43300 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.37□□□□□ -1.87
LRRTM2O43300 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
LRRTM2O43300 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
LRRTM2O43300 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC3.37□□□□□ -1.87
LRRTM2O43300 SUGT1P1-201ENST00000379514 476 ntBASIC3.37□□□□□ -1.87
LRRTM2O43300 Y_RNA.408-201ENST00000383987 102 ntBASIC3.37□□□□□ -1.87
LRRTM2O43300 RNU6-339P-201ENST00000384310 107 ntBASIC3.37□□□□□ -1.87
LRRTM2O43300 RNU6-441P-201ENST00000384545 106 ntBASIC3.37□□□□□ -1.87
LRRTM2O43300 MIR490-201ENST00000384865 128 ntBASIC3.37□□□□□ -1.87
LRRTM2O43300 SNORA48.2-201ENST00000390926 124 ntBASIC3.37□□□□□ -1.87
LRRTM2O43300 ANAPC10P1-201ENST00000395991 556 ntBASIC3.37□□□□□ -1.87
LRRTM2O43300 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC3.37□□□□□ -1.87
LRRTM2O43300 ATP5A1P2-201ENST00000412323 255 ntBASIC3.37□□□□□ -1.87
LRRTM2O43300 RAD23BP2-201ENST00000416003 1207 ntBASIC3.37□□□□□ -1.87
LRRTM2O43300 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC3.37□□□□□ -1.87
LRRTM2O43300 BOLA3P4-201ENST00000418151 400 ntBASIC3.37□□□□□ -1.87
LRRTM2O43300 BX842559.1-201ENST00000419615 532 ntBASIC3.37□□□□□ -1.87
LRRTM2O43300 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC3.37□□□□□ -1.87
LRRTM2O43300 AC233981.1-201ENST00000423224 461 ntBASIC3.37□□□□□ -1.87
LRRTM2O43300 RPL31P54-201ENST00000429803 370 ntBASIC3.37□□□□□ -1.87
LRRTM2O43300 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC3.37□□□□□ -1.87
LRRTM2O43300 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC3.37□□□□□ -1.87
LRRTM2O43300 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
LRRTM2O43300 HMGN3P1-201ENST00000453847 193 ntBASIC3.37□□□□□ -1.87
LRRTM2O43300 AC004801.2-202ENST00000463559 283 ntBASIC3.37□□□□□ -1.87
LRRTM2O43300 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
LRRTM2O43300 MTCYBP16-201ENST00000509187 1129 ntBASIC3.37□□□□□ -1.87
LRRTM2O43300 RN7SKP60-201ENST00000516985 239 ntBASIC3.37□□□□□ -1.87
LRRTM2O43300 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC3.37□□□□□ -1.87
LRRTM2O43300 CA1-215ENST00000522389 551 ntTSL 3 BASIC3.37□□□□□ -1.87
LRRTM2O43300 MTCO2P15-201ENST00000532655 656 ntBASIC3.37□□□□□ -1.87
LRRTM2O43300 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC3.37□□□□□ -1.87
LRRTM2O43300 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC3.37□□□□□ -1.87
LRRTM2O43300 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC3.37□□□□□ -1.87
LRRTM2O43300 MTATP6P24-201ENST00000576835 677 ntBASIC3.37□□□□□ -1.87
LRRTM2O43300 MIR4425-201ENST00000580572 84 ntBASIC3.37□□□□□ -1.87
LRRTM2O43300 AP003973.1-201ENST00000604639 691 ntBASIC3.37□□□□□ -1.87
LRRTM2O43300 AC107952.2-201ENST00000606048 486 ntBASIC3.37□□□□□ -1.87
LRRTM2O43300 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC3.37□□□□□ -1.87
LRRTM2O43300 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC3.37□□□□□ -1.87
LRRTM2O43300 AL354760.1-201ENST00000608357 643 ntBASIC3.37□□□□□ -1.87
LRRTM2O43300 AC107075.1-201ENST00000613695 314 ntBASIC3.37□□□□□ -1.87
LRRTM2O43300 AL354976.1-201ENST00000613843 387 ntBASIC3.37□□□□□ -1.87
LRRTM2O43300 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC3.37□□□□□ -1.87
LRRTM2O43300 AC119674.1-207ENST00000641355 633 ntBASIC3.37□□□□□ -1.87
LRRTM2O43300 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.37□□□□□ -1.87
LRRTM2O43300 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.36□□□□□ -1.87
LRRTM2O43300 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.36□□□□□ -1.87
LRRTM2O43300 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.36□□□□□ -1.87
LRRTM2O43300 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC3.36□□□□□ -1.87
LRRTM2O43300 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC3.36□□□□□ -1.87
LRRTM2O43300 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
LRRTM2O43300 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
LRRTM2O43300 RNU6-251P-201ENST00000363235 104 ntBASIC3.36□□□□□ -1.87
LRRTM2O43300 RPL7P60-201ENST00000397636 735 ntBASIC3.36□□□□□ -1.87
LRRTM2O43300 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC3.36□□□□□ -1.87
LRRTM2O43300 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC3.36□□□□□ -1.87
LRRTM2O43300 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC3.36□□□□□ -1.87
LRRTM2O43300 MTCO3P12-201ENST00000416718 547 ntBASIC3.36□□□□□ -1.87
LRRTM2O43300 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC3.36□□□□□ -1.87
LRRTM2O43300 AC007435.1-201ENST00000421086 415 ntBASIC3.36□□□□□ -1.87
LRRTM2O43300 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC3.36□□□□□ -1.87
LRRTM2O43300 AC084290.1-201ENST00000434995 374 ntBASIC3.36□□□□□ -1.87
LRRTM2O43300 CR769776.1-201ENST00000441254 787 ntBASIC3.36□□□□□ -1.87
LRRTM2O43300 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC3.36□□□□□ -1.87
LRRTM2O43300 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC3.36□□□□□ -1.87
LRRTM2O43300 ZNF736P8Y-201ENST00000451913 669 ntBASIC3.36□□□□□ -1.87
LRRTM2O43300 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC3.36□□□□□ -1.87
LRRTM2O43300 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC3.36□□□□□ -1.87
LRRTM2O43300 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC3.36□□□□□ -1.87
LRRTM2O43300 SNORD105B-201ENST00000458770 79 ntBASIC3.36□□□□□ -1.87
LRRTM2O43300 snoU13.4-201ENST00000458916 104 ntBASIC3.36□□□□□ -1.87
LRRTM2O43300 AC005410.1-202ENST00000460347 485 ntBASIC3.36□□□□□ -1.87
LRRTM2O43300 RPL21P10-201ENST00000463521 490 ntBASIC3.36□□□□□ -1.87
LRRTM2O43300 RPL23AP14-201ENST00000468281 468 ntBASIC3.36□□□□□ -1.87
LRRTM2O43300 AC011979.1-201ENST00000472300 483 ntBASIC3.36□□□□□ -1.87
LRRTM2O43300 VPS26AP1-201ENST00000483197 979 ntBASIC3.36□□□□□ -1.87
LRRTM2O43300 RPS3AP50-201ENST00000487064 803 ntBASIC3.36□□□□□ -1.87
LRRTM2O43300 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC3.36□□□□□ -1.87
LRRTM2O43300 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC3.36□□□□□ -1.87
LRRTM2O43300 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC3.36□□□□□ -1.87
LRRTM2O43300 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC3.36□□□□□ -1.87
LRRTM2O43300 AC004062.1-201ENST00000509926 645 ntBASIC3.36□□□□□ -1.87
LRRTM2O43300 MTCO3P44-201ENST00000510977 541 ntBASIC3.36□□□□□ -1.87
LRRTM2O43300 LEF1-218ENST00000512172 598 ntTSL 2 BASIC3.36□□□□□ -1.87
LRRTM2O43300 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC3.36□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 106.6 ms