Protein–RNA interactions for Protein: O15178

T, Brachyury protein, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TO15178 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.66□□□□□ -1.82
TO15178 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC3.66□□□□□ -1.82
TO15178 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC3.66□□□□□ -1.82
TO15178 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
TO15178 MIR372-201ENST00000362225 67 ntBASIC3.66□□□□□ -1.82
TO15178 RNA5SP295-201ENST00000362655 121 ntBASIC3.66□□□□□ -1.82
TO15178 Y_RNA.302-201ENST00000364997 102 ntBASIC3.66□□□□□ -1.82
TO15178 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC3.66□□□□□ -1.82
TO15178 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
TO15178 RNU4-6P-201ENST00000410804 122 ntBASIC3.66□□□□□ -1.82
TO15178 RNA5SP306-201ENST00000411087 107 ntBASIC3.66□□□□□ -1.82
TO15178 RPL23AP39-201ENST00000415533 405 ntBASIC3.66□□□□□ -1.82
TO15178 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC3.66□□□□□ -1.82
TO15178 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC3.66□□□□□ -1.82
TO15178 AC011742.1-201ENST00000431448 434 ntBASIC3.66□□□□□ -1.82
TO15178 TBCAP1-201ENST00000436520 327 ntBASIC3.66□□□□□ -1.82
TO15178 HMGB1P37-201ENST00000439613 609 ntBASIC3.66□□□□□ -1.82
TO15178 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC3.66□□□□□ -1.82
TO15178 MTND5P14-201ENST00000441481 1267 ntBASIC3.66□□□□□ -1.82
TO15178 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC3.66□□□□□ -1.82
TO15178 MTATP6P26-201ENST00000445926 662 ntBASIC3.66□□□□□ -1.82
TO15178 PAXBP1P1-201ENST00000449315 447 ntBASIC3.66□□□□□ -1.82
TO15178 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC3.66□□□□□ -1.82
TO15178 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC3.66□□□□□ -1.82
TO15178 ARPC3P2-201ENST00000457786 533 ntBASIC3.66□□□□□ -1.82
TO15178 snoU109.4-201ENST00000458953 143 ntBASIC3.66□□□□□ -1.82
TO15178 RPL30P6-201ENST00000475925 342 ntBASIC3.66□□□□□ -1.82
TO15178 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
TO15178 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC3.66□□□□□ -1.82
TO15178 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC3.66□□□□□ -1.82
TO15178 AC024589.1-201ENST00000512207 263 ntBASIC3.66□□□□□ -1.82
TO15178 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC3.66□□□□□ -1.82
TO15178 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC3.66□□□□□ -1.82
TO15178 RNU6-27P-201ENST00000516146 107 ntBASIC3.66□□□□□ -1.82
TO15178 NDUFA5P2-201ENST00000519723 344 ntBASIC3.66□□□□□ -1.82
TO15178 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC3.66□□□□□ -1.82
TO15178 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC3.66□□□□□ -1.82
TO15178 OR4P1P-201ENST00000530808 1136 ntBASIC3.66□□□□□ -1.82
TO15178 AC109635.4-202ENST00000531666 412 ntBASIC3.66□□□□□ -1.82
TO15178 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
TO15178 AC024224.1-201ENST00000538284 609 ntBASIC3.66□□□□□ -1.82
TO15178 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC3.66□□□□□ -1.82
TO15178 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC3.66□□□□□ -1.82
TO15178 EEF1B2P4-201ENST00000551398 348 ntBASIC3.66□□□□□ -1.82
TO15178 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC3.66□□□□□ -1.82
TO15178 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC3.66□□□□□ -1.82
TO15178 GNRHR2P1-201ENST00000555315 631 ntBASIC3.66□□□□□ -1.82
TO15178 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC3.66□□□□□ -1.82
TO15178 AC109446.2-201ENST00000567872 497 ntBASIC3.66□□□□□ -1.82
TO15178 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC3.66□□□□□ -1.82
TO15178 BBIP1P1-201ENST00000602999 279 ntBASIC3.66□□□□□ -1.82
TO15178 AL109653.1-201ENST00000603091 248 ntBASIC3.66□□□□□ -1.82
TO15178 ACTR3BP1-201ENST00000605584 1247 ntBASIC3.66□□□□□ -1.82
TO15178 AL390208.1-201ENST00000605885 644 ntBASIC3.66□□□□□ -1.82
TO15178 DLEU1_2.1-201ENST00000617920 342 ntBASIC3.66□□□□□ -1.82
TO15178 XIST_intron.1-201ENST00000619444 68 ntBASIC3.66□□□□□ -1.82
TO15178 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC3.66□□□□□ -1.82
TO15178 U7.8-201ENST00000619968 63 ntBASIC3.66□□□□□ -1.82
TO15178 AL139089.1-201ENST00000620372 975 ntBASIC3.66□□□□□ -1.82
TO15178 AL445264.1-201ENST00000621719 171 ntBASIC3.66□□□□□ -1.82
TO15178 AL356596.1-201ENST00000624230 379 ntBASIC3.66□□□□□ -1.82
TO15178 AC091925.2-201ENST00000625059 256 ntBASIC3.66□□□□□ -1.82
TO15178 AC099063.3-201ENST00000642066 185 ntBASIC3.66□□□□□ -1.82
TO15178 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC3.66□□□□□ -1.82
TO15178 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.66□□□□□ -1.82
TO15178 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
TO15178 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
TO15178 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.82
TO15178 AC138915.3-201ENST00000562908 1389 ntBASIC3.65□□□□□ -1.82
TO15178 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.82
TO15178 TNPO1P3-201ENST00000436471 2662 ntBASIC3.65□□□□□ -1.82
TO15178 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC3.65□□□□□ -1.83
TO15178 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
TO15178 RNU6-28P-201ENST00000362378 107 ntBASIC3.65□□□□□ -1.83
TO15178 RNU6-553P-201ENST00000364047 96 ntBASIC3.65□□□□□ -1.83
TO15178 RN7SKP227-201ENST00000364445 330 ntBASIC3.65□□□□□ -1.83
TO15178 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC3.65□□□□□ -1.83
TO15178 SNORD51-201ENST00000384320 80 ntBASIC3.65□□□□□ -1.83
TO15178 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
TO15178 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC3.65□□□□□ -1.83
TO15178 TOMM22P1-201ENST00000418578 312 ntBASIC3.65□□□□□ -1.83
TO15178 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC3.65□□□□□ -1.83
TO15178 AIMP1P1-201ENST00000418670 937 ntBASIC3.65□□□□□ -1.83
TO15178 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC3.65□□□□□ -1.83
TO15178 OR8F1P-201ENST00000425243 930 ntBASIC3.65□□□□□ -1.83
TO15178 AC007742.1-201ENST00000425789 329 ntBASIC3.65□□□□□ -1.83
TO15178 NEK4P1-201ENST00000433383 879 ntBASIC3.65□□□□□ -1.83
TO15178 MRPS18BP2-201ENST00000434310 759 ntBASIC3.65□□□□□ -1.83
TO15178 KCTD9P3-201ENST00000434597 1169 ntBASIC3.65□□□□□ -1.83
TO15178 ELOCP26-201ENST00000436067 329 ntBASIC3.65□□□□□ -1.83
TO15178 SDCBPP1-201ENST00000440192 890 ntBASIC3.65□□□□□ -1.83
TO15178 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC3.65□□□□□ -1.83
TO15178 ZNF736P5Y-201ENST00000451173 805 ntBASIC3.65□□□□□ -1.83
TO15178 HMGB1P15-201ENST00000453854 435 ntBASIC3.65□□□□□ -1.83
TO15178 AL445669.2-201ENST00000454425 421 ntBASIC3.65□□□□□ -1.83
TO15178 BX322784.1-201ENST00000455793 1077 ntBASIC3.65□□□□□ -1.83
TO15178 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC3.65□□□□□ -1.83
TO15178 HMGN2P16-201ENST00000456802 261 ntBASIC3.65□□□□□ -1.83
TO15178 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC3.65□□□□□ -1.83
TO15178 AC111000.2-201ENST00000507775 550 ntBASIC3.65□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 95.4 ms