Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 AF186190.1-201ENST00000517470 480 ntBASIC4.43□□□□□ -1.7
CUX2O14529 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC4.43□□□□□ -1.7
CUX2O14529 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC4.43□□□□□ -1.7
CUX2O14529 RN7SL622P-201ENST00000585292 275 ntBASIC4.43□□□□□ -1.7
CUX2O14529 AL139286.1-201ENST00000604465 483 ntBASIC4.43□□□□□ -1.7
CUX2O14529 uc_338.9-201ENST00000617424 182 ntBASIC4.43□□□□□ -1.7
CUX2O14529 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
CUX2O14529 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
CUX2O14529 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
CUX2O14529 RFX3-203ENST00000381984 364 ntTSL 3 BASIC4.43□□□□□ -1.7
CUX2O14529 MIR3074-201ENST00000384885 81 ntBASIC4.43□□□□□ -1.7
CUX2O14529 RNA5SP213-201ENST00000391031 106 ntBASIC4.43□□□□□ -1.7
CUX2O14529 RNU6-603P-201ENST00000411403 107 ntBASIC4.43□□□□□ -1.7
CUX2O14529 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC4.43□□□□□ -1.7
CUX2O14529 IPMKP1-201ENST00000425988 855 ntBASIC4.43□□□□□ -1.7
CUX2O14529 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC4.43□□□□□ -1.7
CUX2O14529 NIPA2P2-201ENST00000496376 1083 ntBASIC4.43□□□□□ -1.7
CUX2O14529 KCTD9P5-201ENST00000504141 1170 ntBASIC4.43□□□□□ -1.7
CUX2O14529 MTCO1P31-201ENST00000506355 492 ntBASIC4.43□□□□□ -1.7
CUX2O14529 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC4.43□□□□□ -1.7
CUX2O14529 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC4.43□□□□□ -1.7
CUX2O14529 AC090525.3-201ENST00000605601 189 ntBASIC4.43□□□□□ -1.7
CUX2O14529 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC4.43□□□□□ -1.7
CUX2O14529 AC010338.1-201ENST00000621823 717 ntBASIC4.43□□□□□ -1.7
CUX2O14529 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
CUX2O14529 RNU1-17P-201ENST00000363022 152 ntBASIC4.42□□□□□ -1.7
CUX2O14529 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC4.42□□□□□ -1.7
CUX2O14529 AC099336.2-201ENST00000422457 254 ntBASIC4.42□□□□□ -1.7
CUX2O14529 NANOGP5-201ENST00000424456 877 ntBASIC4.42□□□□□ -1.7
CUX2O14529 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC4.42□□□□□ -1.7
CUX2O14529 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC4.42□□□□□ -1.7
CUX2O14529 MTCO1P42-201ENST00000457379 726 ntBASIC4.42□□□□□ -1.7
CUX2O14529 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC4.42□□□□□ -1.7
CUX2O14529 PDCL2P2-201ENST00000533651 189 ntBASIC4.42□□□□□ -1.7
CUX2O14529 HPRT1P3-201ENST00000539521 576 ntBASIC4.42□□□□□ -1.7
CUX2O14529 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC4.42□□□□□ -1.7
CUX2O14529 AC010200.2-201ENST00000605098 235 ntBASIC4.42□□□□□ -1.7
CUX2O14529 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC4.42□□□□□ -1.7
CUX2O14529 AL391813.2-201ENST00000609113 322 ntBASIC4.42□□□□□ -1.7
CUX2O14529 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC4.42□□□□□ -1.7
CUX2O14529 EXOC5P1-201ENST00000510543 1969 ntBASIC4.41□□□□□ -1.7
CUX2O14529 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CUX2O14529 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC4.41□□□□□ -1.7
CUX2O14529 U8.13-201ENST00000390842 128 ntBASIC4.41□□□□□ -1.7
CUX2O14529 RPL21P75-201ENST00000396599 483 ntBASIC4.41□□□□□ -1.7
CUX2O14529 RPL21P1-201ENST00000399532 476 ntBASIC4.41□□□□□ -1.7
CUX2O14529 RPL21P28-201ENST00000401418 483 ntBASIC4.41□□□□□ -1.7
CUX2O14529 AL592114.1-201ENST00000403842 483 ntBASIC4.41□□□□□ -1.7
CUX2O14529 AL024474.1-201ENST00000404655 591 ntBASIC4.41□□□□□ -1.7
CUX2O14529 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
CUX2O14529 AC007677.1-201ENST00000445757 515 ntBASIC4.41□□□□□ -1.7
CUX2O14529 AC068781.1-201ENST00000488231 618 ntBASIC4.41□□□□□ -1.7
CUX2O14529 RPL21P16-201ENST00000495531 483 ntBASIC4.41□□□□□ -1.7
CUX2O14529 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC4.41□□□□□ -1.7
CUX2O14529 HSPE1P18-201ENST00000517602 280 ntBASIC4.41□□□□□ -1.7
CUX2O14529 AP001317.1-201ENST00000531194 960 ntBASIC4.41□□□□□ -1.7
CUX2O14529 AC010198.2-201ENST00000550612 259 ntBASIC4.41□□□□□ -1.7
CUX2O14529 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC4.41□□□□□ -1.7
CUX2O14529 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC4.41□□□□□ -1.7
CUX2O14529 AC103810.6-201ENST00000606708 136 ntBASIC4.41□□□□□ -1.7
CUX2O14529 AC093673.2-201ENST00000609674 331 ntBASIC4.41□□□□□ -1.7
CUX2O14529 AC131238.1-201ENST00000617135 328 ntBASIC4.41□□□□□ -1.7
CUX2O14529 TTN-204ENST00000360870 18218 ntTSL 5 BASIC4.4□□□□□ -1.7
CUX2O14529 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC4.4□□□□□ -1.7
CUX2O14529 SNORA26.9-201ENST00000391322 122 ntBASIC4.4□□□□□ -1.71
CUX2O14529 GSTA9P-201ENST00000406231 611 ntBASIC4.4□□□□□ -1.71
CUX2O14529 Z86062.1-201ENST00000406773 777 ntBASIC4.4□□□□□ -1.71
CUX2O14529 RNU6ATAC40P-201ENST00000408580 137 ntBASIC4.4□□□□□ -1.71
CUX2O14529 RPS15AP6-201ENST00000420703 385 ntBASIC4.4□□□□□ -1.71
CUX2O14529 AC108667.1-201ENST00000428618 249 ntBASIC4.4□□□□□ -1.71
CUX2O14529 AC108860.1-201ENST00000484521 383 ntBASIC4.4□□□□□ -1.71
CUX2O14529 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC4.4□□□□□ -1.71
CUX2O14529 AC126177.3-201ENST00000551839 688 ntBASIC4.4□□□□□ -1.71
CUX2O14529 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC4.4□□□□□ -1.71
CUX2O14529 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
CUX2O14529 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
CUX2O14529 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CUX2O14529 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC4.39□□□□□ -1.71
CUX2O14529 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC4.39□□□□□ -1.71
CUX2O14529 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC4.39□□□□□ -1.71
CUX2O14529 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC4.39□□□□□ -1.71
CUX2O14529 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC4.39□□□□□ -1.71
CUX2O14529 AC026616.1-201ENST00000523157 525 ntBASIC4.39□□□□□ -1.71
CUX2O14529 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC4.39□□□□□ -1.71
CUX2O14529 MIR548Y-201ENST00000582739 110 ntBASIC4.39□□□□□ -1.71
CUX2O14529 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC4.39□□□□□ -1.71
CUX2O14529 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC4.39□□□□□ -1.71
CUX2O14529 AC016717.2-201ENST00000609089 5141 ntBASIC4.38□□□□□ -1.71
CUX2O14529 RNU6-146P-201ENST00000384602 108 ntBASIC4.38□□□□□ -1.71
CUX2O14529 TRAPPC2P10-201ENST00000415662 323 ntBASIC4.38□□□□□ -1.71
CUX2O14529 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CUX2O14529 TRAPPC13P1-201ENST00000435991 1062 ntBASIC4.38□□□□□ -1.71
CUX2O14529 RNU6-1004P-201ENST00000516584 111 ntBASIC4.38□□□□□ -1.71
CUX2O14529 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC4.38□□□□□ -1.71
CUX2O14529 AC242628.1-201ENST00000606810 391 ntBASIC4.38□□□□□ -1.71
CUX2O14529 AC110792.4-201ENST00000609843 298 ntBASIC4.38□□□□□ -1.71
CUX2O14529 AC090115.4-201ENST00000609970 188 ntBASIC4.38□□□□□ -1.71
CUX2O14529 AC055764.2-201ENST00000610089 670 ntBASIC4.38□□□□□ -1.71
CUX2O14529 CR589904.2-201ENST00000612533 440 ntBASIC4.38□□□□□ -1.71
CUX2O14529 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC4.38□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 98.6 ms