Protein–RNA interactions for Protein: O00555

CACNA1A, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, humanhuman

Predictions only

Length 2,505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1AO00555 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC2.32□□□□□ -2.04
CACNA1AO00555 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC2.32□□□□□ -2.04
CACNA1AO00555 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC2.32□□□□□ -2.04
CACNA1AO00555 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC2.31□□□□□ -2.04
CACNA1AO00555 Y_RNA.48-201ENST00000362710 103 ntBASIC2.31□□□□□ -2.04
CACNA1AO00555 Y_RNA.167-201ENST00000363735 109 ntBASIC2.31□□□□□ -2.04
CACNA1AO00555 RNA5SP139-201ENST00000364340 117 ntBASIC2.31□□□□□ -2.04
CACNA1AO00555 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC2.31□□□□□ -2.04
CACNA1AO00555 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC2.31□□□□□ -2.04
CACNA1AO00555 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC2.31□□□□□ -2.04
CACNA1AO00555 BTG4P1-201ENST00000510421 183 ntBASIC2.31□□□□□ -2.04
CACNA1AO00555 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC2.31□□□□□ -2.04
CACNA1AO00555 AC008264.2-201ENST00000610193 3731 ntBASIC2.31□□□□□ -2.04
CACNA1AO00555 AC109315.1-201ENST00000584143 1347 ntBASIC2.31□□□□□ -2.04
CACNA1AO00555 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC2.31□□□□□ -2.04
CACNA1AO00555 RNU1-91P-201ENST00000364746 163 ntBASIC2.31□□□□□ -2.04
CACNA1AO00555 DNAJC19P6-201ENST00000401853 280 ntBASIC2.31□□□□□ -2.04
CACNA1AO00555 RPS7P9-201ENST00000414704 586 ntBASIC2.31□□□□□ -2.04
CACNA1AO00555 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
CACNA1AO00555 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC2.31□□□□□ -2.04
CACNA1AO00555 AP005262.1-201ENST00000582646 997 ntBASIC2.31□□□□□ -2.04
CACNA1AO00555 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
CACNA1AO00555 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
CACNA1AO00555 ZNF734P-201ENST00000419494 1534 ntBASIC2.31□□□□□ -2.04
CACNA1AO00555 RNU1-35P-201ENST00000362782 153 ntBASIC2.3□□□□□ -2.04
CACNA1AO00555 AC004987.3-201ENST00000413879 771 ntBASIC2.3□□□□□ -2.04
CACNA1AO00555 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.3□□□□□ -2.04
CACNA1AO00555 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC2.3□□□□□ -2.04
CACNA1AO00555 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC2.3□□□□□ -2.04
CACNA1AO00555 ST13P14-201ENST00000474095 734 ntBASIC2.3□□□□□ -2.04
CACNA1AO00555 AC104090.1-201ENST00000506341 1171 ntBASIC2.3□□□□□ -2.04
CACNA1AO00555 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC2.3□□□□□ -2.04
CACNA1AO00555 DNAJC19P9-201ENST00000555084 351 ntBASIC2.3□□□□□ -2.04
CACNA1AO00555 MEG8-218ENST00000556720 456 ntTSL 3 BASIC2.3□□□□□ -2.04
CACNA1AO00555 AC090115.4-201ENST00000609970 188 ntBASIC2.3□□□□□ -2.04
CACNA1AO00555 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
CACNA1AO00555 AC006484.1-201ENST00000435086 1884 ntBASIC2.3□□□□□ -2.04
CACNA1AO00555 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
CACNA1AO00555 RPL21P3-201ENST00000395517 478 ntBASIC2.3□□□□□ -2.04
CACNA1AO00555 RNU6ATAC20P-201ENST00000408436 127 ntBASIC2.3□□□□□ -2.04
CACNA1AO00555 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC2.3□□□□□ -2.04
CACNA1AO00555 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC2.3□□□□□ -2.04
CACNA1AO00555 HMGN1P18-201ENST00000457642 277 ntBASIC2.3□□□□□ -2.04
CACNA1AO00555 AC007336.1-201ENST00000576365 3828 ntBASIC2.3□□□□□ -2.04
CACNA1AO00555 AC005034.5-201ENST00000604219 466 ntBASIC2.3□□□□□ -2.04
CACNA1AO00555 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
CACNA1AO00555 Y_RNA.115-201ENST00000363272 98 ntBASIC2.29□□□□□ -2.04
CACNA1AO00555 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
CACNA1AO00555 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC2.29□□□□□ -2.04
CACNA1AO00555 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC2.29□□□□□ -2.04
CACNA1AO00555 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC2.29□□□□□ -2.04
CACNA1AO00555 AC117532.1-201ENST00000514638 323 ntBASIC2.29□□□□□ -2.04
CACNA1AO00555 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC2.29□□□□□ -2.04
CACNA1AO00555 AC022634.1-201ENST00000520765 532 ntBASIC2.29□□□□□ -2.04
CACNA1AO00555 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC2.29□□□□□ -2.04
CACNA1AO00555 AL137100.2-201ENST00000555786 315 ntBASIC2.29□□□□□ -2.04
CACNA1AO00555 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC2.29□□□□□ -2.04
CACNA1AO00555 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC2.29□□□□□ -2.04
CACNA1AO00555 AC012360.2-201ENST00000609349 391 ntBASIC2.29□□□□□ -2.04
CACNA1AO00555 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC2.29□□□□□ -2.04
CACNA1AO00555 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
CACNA1AO00555 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC2.29□□□□□ -2.04
CACNA1AO00555 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC2.29□□□□□ -2.04
CACNA1AO00555 RPS12P5-201ENST00000423449 371 ntBASIC2.29□□□□□ -2.04
CACNA1AO00555 MIR4635-201ENST00000583759 79 ntBASIC2.29□□□□□ -2.04
CACNA1AO00555 AL162233.1-201ENST00000620014 944 ntBASIC2.29□□□□□ -2.04
CACNA1AO00555 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC2.28□□□□□ -2.04
CACNA1AO00555 XPOTP1-201ENST00000443317 2398 ntBASIC2.28□□□□□ -2.04
CACNA1AO00555 AL590004.2-201ENST00000404787 371 ntBASIC2.28□□□□□ -2.04
CACNA1AO00555 DUXAP8-207ENST00000456786 622 ntBASIC2.28□□□□□ -2.04
CACNA1AO00555 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC2.28□□□□□ -2.04
CACNA1AO00555 AL139395.1-201ENST00000603662 160 ntBASIC2.28□□□□□ -2.04
CACNA1AO00555 CR381653.2-201ENST00000624041 768 ntBASIC2.28□□□□□ -2.04
CACNA1AO00555 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
CACNA1AO00555 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
CACNA1AO00555 AC006378.2-201ENST00000623178 2476 ntBASIC2.28□□□□□ -2.04
CACNA1AO00555 AC007256.1-201ENST00000392253 2765 ntBASIC2.28□□□□□ -2.04
CACNA1AO00555 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
CACNA1AO00555 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC2.28□□□□□ -2.04
CACNA1AO00555 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
CACNA1AO00555 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC2.28□□□□□ -2.04
CACNA1AO00555 MTCYBP31-201ENST00000438855 1122 ntBASIC2.28□□□□□ -2.04
CACNA1AO00555 MTND2P25-201ENST00000449028 610 ntBASIC2.28□□□□□ -2.04
CACNA1AO00555 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC2.28□□□□□ -2.04
CACNA1AO00555 SYT14P1-201ENST00000481459 721 ntBASIC2.28□□□□□ -2.04
CACNA1AO00555 AC090543.1-201ENST00000492168 485 ntBASIC2.28□□□□□ -2.04
CACNA1AO00555 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC2.28□□□□□ -2.04
CACNA1AO00555 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC2.28□□□□□ -2.04
CACNA1AO00555 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
CACNA1AO00555 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.28□□□□□ -2.05
CACNA1AO00555 AC026523.2-201ENST00000625039 7739 ntBASIC2.28□□□□□ -2.05
CACNA1AO00555 TTC39DP-201ENST00000416781 1688 ntBASIC2.28□□□□□ -2.05
CACNA1AO00555 MAPK10-266ENST00000641066 6555 ntBASIC2.27□□□□□ -2.05
CACNA1AO00555 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
CACNA1AO00555 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
CACNA1AO00555 RNA5SP274-201ENST00000410484 108 ntBASIC2.27□□□□□ -2.05
CACNA1AO00555 RPL5P30-201ENST00000465511 891 ntBASIC2.27□□□□□ -2.05
CACNA1AO00555 RN7SL633P-201ENST00000488974 297 ntBASIC2.27□□□□□ -2.05
CACNA1AO00555 AC128657.1-201ENST00000549459 145 ntBASIC2.27□□□□□ -2.05
CACNA1AO00555 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC2.27□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 104.4 ms