Protein–RNA interactions for Protein: O00501

CLDN5, Claudin-5, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN5O00501 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
CLDN5O00501 RNU6-236P-201ENST00000363886 106 ntBASIC3.3□□□□□ -1.88
CLDN5O00501 SNORD6-201ENST00000365444 73 ntBASIC3.3□□□□□ -1.88
CLDN5O00501 SNORA51.6-201ENST00000384151 125 ntBASIC3.3□□□□□ -1.88
CLDN5O00501 SNORA54-201ENST00000384281 123 ntBASIC3.3□□□□□ -1.88
CLDN5O00501 SNORA48.5-201ENST00000391143 135 ntBASIC3.3□□□□□ -1.88
CLDN5O00501 Z98941.1-201ENST00000407764 100 ntBASIC3.3□□□□□ -1.88
CLDN5O00501 RN7SKP285-201ENST00000410137 318 ntBASIC3.3□□□□□ -1.88
CLDN5O00501 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC3.3□□□□□ -1.88
CLDN5O00501 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC3.3□□□□□ -1.88
CLDN5O00501 PTP4A1P7-201ENST00000423476 514 ntBASIC3.3□□□□□ -1.88
CLDN5O00501 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC3.3□□□□□ -1.88
CLDN5O00501 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC3.3□□□□□ -1.88
CLDN5O00501 ISCA1P2-201ENST00000438679 421 ntBASIC3.3□□□□□ -1.88
CLDN5O00501 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC3.3□□□□□ -1.88
CLDN5O00501 AC016696.1-201ENST00000446949 318 ntBASIC3.3□□□□□ -1.88
CLDN5O00501 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC3.3□□□□□ -1.88
CLDN5O00501 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC3.3□□□□□ -1.88
CLDN5O00501 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.3□□□□□ -1.88
CLDN5O00501 BOLA3P3-201ENST00000505182 232 ntBASIC3.3□□□□□ -1.88
CLDN5O00501 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC3.3□□□□□ -1.88
CLDN5O00501 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC3.3□□□□□ -1.88
CLDN5O00501 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
CLDN5O00501 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC3.3□□□□□ -1.88
CLDN5O00501 AP001207.2-201ENST00000519490 539 ntBASIC3.3□□□□□ -1.88
CLDN5O00501 AC104027.1-201ENST00000521887 300 ntBASIC3.3□□□□□ -1.88
CLDN5O00501 AP001636.2-201ENST00000525517 696 ntBASIC3.3□□□□□ -1.88
CLDN5O00501 NDUFS5P6-201ENST00000529136 295 ntBASIC3.3□□□□□ -1.88
CLDN5O00501 OR4P1P-201ENST00000530808 1136 ntBASIC3.3□□□□□ -1.88
CLDN5O00501 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC3.3□□□□□ -1.88
CLDN5O00501 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC3.3□□□□□ -1.88
CLDN5O00501 AC091515.1-201ENST00000548110 679 ntBASIC3.3□□□□□ -1.88
CLDN5O00501 AC126177.3-201ENST00000551839 688 ntBASIC3.3□□□□□ -1.88
CLDN5O00501 GTF2IP8-201ENST00000560687 584 ntBASIC3.3□□□□□ -1.88
CLDN5O00501 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
CLDN5O00501 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC3.3□□□□□ -1.88
CLDN5O00501 MIR5708-201ENST00000579723 85 ntBASIC3.3□□□□□ -1.88
CLDN5O00501 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC3.3□□□□□ -1.88
CLDN5O00501 AC005000.2-201ENST00000605468 310 ntBASIC3.3□□□□□ -1.88
CLDN5O00501 AL365400.2-201ENST00000605604 902 ntBASIC3.3□□□□□ -1.88
CLDN5O00501 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC3.3□□□□□ -1.88
CLDN5O00501 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
CLDN5O00501 AC080188.3-201ENST00000624842 748 ntBASIC3.3□□□□□ -1.88
CLDN5O00501 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.3□□□□□ -1.88
CLDN5O00501 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.29□□□□□ -1.88
CLDN5O00501 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC3.29□□□□□ -1.88
CLDN5O00501 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
CLDN5O00501 Y_RNA.578-201ENST00000390903 88 ntBASIC3.29□□□□□ -1.88
CLDN5O00501 RNU6-1300P-201ENST00000391046 108 ntBASIC3.29□□□□□ -1.88
CLDN5O00501 AC016769.3-201ENST00000396562 315 ntBASIC3.29□□□□□ -1.88
CLDN5O00501 MIR1183-201ENST00000408856 89 ntBASIC3.29□□□□□ -1.88
CLDN5O00501 ERMN-204ENST00000409925 556 ntTSL 4 BASIC3.29□□□□□ -1.88
CLDN5O00501 RNA5SP129-201ENST00000410276 118 ntBASIC3.29□□□□□ -1.88
CLDN5O00501 RPS7P9-201ENST00000414704 586 ntBASIC3.29□□□□□ -1.88
CLDN5O00501 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.29□□□□□ -1.88
CLDN5O00501 DPRXP1-201ENST00000426312 460 ntBASIC3.29□□□□□ -1.88
CLDN5O00501 BLOC1S2P1-201ENST00000428431 301 ntBASIC3.29□□□□□ -1.88
CLDN5O00501 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC3.29□□□□□ -1.88
CLDN5O00501 PTGES3P1-201ENST00000439531 483 ntBASIC3.29□□□□□ -1.88
CLDN5O00501 RPL7P52-201ENST00000449200 742 ntBASIC3.29□□□□□ -1.88
CLDN5O00501 RPL21P104-201ENST00000464143 478 ntBASIC3.29□□□□□ -1.88
CLDN5O00501 AC078785.3-201ENST00000476607 425 ntBASIC3.29□□□□□ -1.88
CLDN5O00501 RPS4XP22-201ENST00000480755 780 ntBASIC3.29□□□□□ -1.88
CLDN5O00501 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
CLDN5O00501 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC3.29□□□□□ -1.88
CLDN5O00501 AL024509.2-201ENST00000493462 493 ntBASIC3.29□□□□□ -1.88
CLDN5O00501 SUMO2P5-201ENST00000506790 245 ntBASIC3.29□□□□□ -1.88
CLDN5O00501 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.29□□□□□ -1.88
CLDN5O00501 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC3.29□□□□□ -1.88
CLDN5O00501 IGKV2D-23-201ENST00000518179 286 ntBASIC3.29□□□□□ -1.88
CLDN5O00501 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC3.29□□□□□ -1.88
CLDN5O00501 MTND5P21-201ENST00000531961 522 ntBASIC3.29□□□□□ -1.88
CLDN5O00501 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC3.29□□□□□ -1.88
CLDN5O00501 AC087481.2-201ENST00000565492 330 ntBASIC3.29□□□□□ -1.88
CLDN5O00501 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC3.29□□□□□ -1.88
CLDN5O00501 AC090079.2-201ENST00000575289 768 ntBASIC3.29□□□□□ -1.88
CLDN5O00501 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC3.29□□□□□ -1.88
CLDN5O00501 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC3.29□□□□□ -1.88
CLDN5O00501 AC090425.2-201ENST00000608818 501 ntBASIC3.29□□□□□ -1.88
CLDN5O00501 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.29□□□□□ -1.88
CLDN5O00501 RNU6-1192P-201ENST00000612197 107 ntBASIC3.29□□□□□ -1.88
CLDN5O00501 AL162274.2-201ENST00000614406 332 ntBASIC3.29□□□□□ -1.88
CLDN5O00501 RNU6-489P-201ENST00000618289 107 ntBASIC3.29□□□□□ -1.88
CLDN5O00501 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC3.29□□□□□ -1.88
CLDN5O00501 AC109454.4-201ENST00000623411 649 ntBASIC3.29□□□□□ -1.88
CLDN5O00501 ZNF663P-202ENST00000641770 1131 ntBASIC3.29□□□□□ -1.88
CLDN5O00501 AC000367.1-201ENST00000452711 1766 ntBASIC3.29□□□□□ -1.88
CLDN5O00501 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.29□□□□□ -1.88
CLDN5O00501 NUP58P1-201ENST00000502546 1738 ntBASIC3.29□□□□□ -1.88
CLDN5O00501 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
CLDN5O00501 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
CLDN5O00501 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.29□□□□□ -1.88
CLDN5O00501 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
CLDN5O00501 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
CLDN5O00501 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
CLDN5O00501 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.28□□□□□ -1.88
CLDN5O00501 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.28□□□□□ -1.88
CLDN5O00501 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC3.28□□□□□ -1.88
CLDN5O00501 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
CLDN5O00501 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms