Protein–RNA interactions for Protein: O00303

EIF3F, Eukaryotic translation initiation factor 3 subunit F, humanhuman

Predicted RBP Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3FO00303 SYF2-202ENST00000354361 926 ntTSL 2 BASIC4.12□□□□□ -1.75
EIF3FO00303 RNA5SP388-201ENST00000362584 119 ntBASIC4.12□□□□□ -1.75
EIF3FO00303 RNU6-501P-201ENST00000364072 100 ntBASIC4.12□□□□□ -1.75
EIF3FO00303 RNA5SP366-201ENST00000365454 123 ntBASIC4.12□□□□□ -1.75
EIF3FO00303 ESD-201ENST00000378697 1079 ntTSL 5 BASIC4.12□□□□□ -1.75
EIF3FO00303 AC025750.1-201ENST00000399891 379 ntBASIC4.12□□□□□ -1.75
EIF3FO00303 CRYBB2P1-203ENST00000415709 538 ntBASIC4.12□□□□□ -1.75
EIF3FO00303 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC4.12□□□□□ -1.75
EIF3FO00303 RPS27AP14-201ENST00000422868 454 ntBASIC4.12□□□□□ -1.75
EIF3FO00303 CCNB1IP1P2-201ENST00000432876 818 ntBASIC4.12□□□□□ -1.75
EIF3FO00303 BTF3P10-201ENST00000433415 495 ntBASIC4.12□□□□□ -1.75
EIF3FO00303 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC4.12□□□□□ -1.75
EIF3FO00303 HMGB1P12-201ENST00000438594 598 ntBASIC4.12□□□□□ -1.75
EIF3FO00303 AL445567.1-201ENST00000439121 144 ntBASIC4.12□□□□□ -1.75
EIF3FO00303 AC239367.2-201ENST00000447309 705 ntBASIC4.12□□□□□ -1.75
EIF3FO00303 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC4.12□□□□□ -1.75
EIF3FO00303 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC4.12□□□□□ -1.75
EIF3FO00303 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC4.12□□□□□ -1.75
EIF3FO00303 RPS4XP13-201ENST00000483219 789 ntBASIC4.12□□□□□ -1.75
EIF3FO00303 OR2A20P-203ENST00000498397 1268 ntBASIC4.12□□□□□ -1.75
EIF3FO00303 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC4.12□□□□□ -1.75
EIF3FO00303 AC093840.1-201ENST00000511599 336 ntBASIC4.12□□□□□ -1.75
EIF3FO00303 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
EIF3FO00303 AC022483.1-201ENST00000514020 567 ntBASIC4.12□□□□□ -1.75
EIF3FO00303 AC099522.1-202ENST00000514718 367 ntBASIC4.12□□□□□ -1.75
EIF3FO00303 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC4.12□□□□□ -1.75
EIF3FO00303 RNA5SP519-201ENST00000516480 119 ntBASIC4.12□□□□□ -1.75
EIF3FO00303 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC4.12□□□□□ -1.75
EIF3FO00303 TBCA-206ENST00000518338 551 ntTSL 2 BASIC4.12□□□□□ -1.75
EIF3FO00303 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC4.12□□□□□ -1.75
EIF3FO00303 AC105233.3-201ENST00000531125 744 ntBASIC4.12□□□□□ -1.75
EIF3FO00303 SNRPGP16-201ENST00000533275 226 ntBASIC4.12□□□□□ -1.75
EIF3FO00303 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC4.12□□□□□ -1.75
EIF3FO00303 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC4.12□□□□□ -1.75
EIF3FO00303 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC4.12□□□□□ -1.75
EIF3FO00303 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC4.12□□□□□ -1.75
EIF3FO00303 AC034268.2-201ENST00000571784 482 ntBASIC4.12□□□□□ -1.75
EIF3FO00303 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC4.12□□□□□ -1.75
EIF3FO00303 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC4.12□□□□□ -1.75
EIF3FO00303 OR4K8P-201ENST00000578842 1048 ntBASIC4.12□□□□□ -1.75
EIF3FO00303 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC4.12□□□□□ -1.75
EIF3FO00303 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC4.12□□□□□ -1.75
EIF3FO00303 AL022099.1-201ENST00000604551 712 ntBASIC4.12□□□□□ -1.75
EIF3FO00303 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
EIF3FO00303 BCRP9-201ENST00000605312 388 ntBASIC4.12□□□□□ -1.75
EIF3FO00303 AC103710.4-201ENST00000609301 899 ntBASIC4.12□□□□□ -1.75
EIF3FO00303 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC4.12□□□□□ -1.75
EIF3FO00303 AL355810.1-201ENST00000614629 552 ntBASIC4.12□□□□□ -1.75
EIF3FO00303 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
EIF3FO00303 TAB3P1-202ENST00000452645 1634 ntBASIC4.12□□□□□ -1.75
EIF3FO00303 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
EIF3FO00303 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC4.12□□□□□ -1.75
EIF3FO00303 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC4.12□□□□□ -1.75
EIF3FO00303 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
EIF3FO00303 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC4.11□□□□□ -1.75
EIF3FO00303 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
EIF3FO00303 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
EIF3FO00303 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
EIF3FO00303 OR11H4-201ENST00000315409 1082 ntBASIC4.11□□□□□ -1.75
EIF3FO00303 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
EIF3FO00303 RNU1-132P-201ENST00000364300 164 ntBASIC4.11□□□□□ -1.75
EIF3FO00303 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
EIF3FO00303 Y_RNA.560-201ENST00000384689 102 ntBASIC4.11□□□□□ -1.75
EIF3FO00303 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
EIF3FO00303 RN7SKP182-201ENST00000410772 298 ntBASIC4.11□□□□□ -1.75
EIF3FO00303 RNU6-920P-201ENST00000410926 92 ntBASIC4.11□□□□□ -1.75
EIF3FO00303 BX119904.4-201ENST00000424402 301 ntBASIC4.11□□□□□ -1.75
EIF3FO00303 RPL18P10-201ENST00000425606 538 ntBASIC4.11□□□□□ -1.75
EIF3FO00303 AL359073.1-201ENST00000448036 403 ntBASIC4.11□□□□□ -1.75
EIF3FO00303 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC4.11□□□□□ -1.75
EIF3FO00303 RPL23AP31-201ENST00000456160 467 ntBASIC4.11□□□□□ -1.75
EIF3FO00303 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC4.11□□□□□ -1.75
EIF3FO00303 RPL9P32-201ENST00000464118 620 ntBASIC4.11□□□□□ -1.75
EIF3FO00303 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC4.11□□□□□ -1.75
EIF3FO00303 RPS4XP15-201ENST00000489210 795 ntBASIC4.11□□□□□ -1.75
EIF3FO00303 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC4.11□□□□□ -1.75
EIF3FO00303 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC4.11□□□□□ -1.75
EIF3FO00303 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC4.11□□□□□ -1.75
EIF3FO00303 MTCO2P32-201ENST00000514865 403 ntBASIC4.11□□□□□ -1.75
EIF3FO00303 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
EIF3FO00303 RNA5SP468-201ENST00000516782 93 ntBASIC4.11□□□□□ -1.75
EIF3FO00303 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC4.11□□□□□ -1.75
EIF3FO00303 AKIRIN1P1-201ENST00000547384 544 ntBASIC4.11□□□□□ -1.75
EIF3FO00303 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
EIF3FO00303 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC4.11□□□□□ -1.75
EIF3FO00303 BNIP3P5-201ENST00000562290 498 ntBASIC4.11□□□□□ -1.75
EIF3FO00303 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC4.11□□□□□ -1.75
EIF3FO00303 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC4.11□□□□□ -1.75
EIF3FO00303 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
EIF3FO00303 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC4.11□□□□□ -1.75
EIF3FO00303 AL109653.1-201ENST00000603091 248 ntBASIC4.11□□□□□ -1.75
EIF3FO00303 AL161729.3-201ENST00000603533 673 ntBASIC4.11□□□□□ -1.75
EIF3FO00303 AL034351.1-201ENST00000605288 668 ntBASIC4.11□□□□□ -1.75
EIF3FO00303 AC090425.2-201ENST00000608818 501 ntBASIC4.11□□□□□ -1.75
EIF3FO00303 AC103858.2-201ENST00000621471 543 ntBASIC4.11□□□□□ -1.75
EIF3FO00303 AC008443.7-201ENST00000622195 246 ntBASIC4.11□□□□□ -1.75
EIF3FO00303 AL356266.1-201ENST00000623311 483 ntBASIC4.11□□□□□ -1.75
EIF3FO00303 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC4.11□□□□□ -1.75
EIF3FO00303 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC4.11□□□□□ -1.75
EIF3FO00303 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC4.11□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 109.7 ms