Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC4.01□□□□□ -1.77
TCRBV7S3A2A0A539 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC4.01□□□□□ -1.77
TCRBV7S3A2A0A539 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC4.01□□□□□ -1.77
TCRBV7S3A2A0A539 AC022916.3-201ENST00000592961 742 ntBASIC4.01□□□□□ -1.77
TCRBV7S3A2A0A539 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC4.01□□□□□ -1.77
TCRBV7S3A2A0A539 AC015871.2-201ENST00000603605 948 ntBASIC4.01□□□□□ -1.77
TCRBV7S3A2A0A539 AC115621.1-201ENST00000604653 858 ntBASIC4.01□□□□□ -1.77
TCRBV7S3A2A0A539 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC4.01□□□□□ -1.77
TCRBV7S3A2A0A539 AL008729.2-201ENST00000606393 473 ntBASIC4.01□□□□□ -1.77
TCRBV7S3A2A0A539 AC108479.2-201ENST00000617314 601 ntBASIC4.01□□□□□ -1.77
TCRBV7S3A2A0A539 FAM35DP-201ENST00000323387 2712 ntBASIC4.01□□□□□ -1.77
TCRBV7S3A2A0A539 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC4.01□□□□□ -1.77
TCRBV7S3A2A0A539 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC4.01□□□□□ -1.77
TCRBV7S3A2A0A539 AL049780.3-201ENST00000624612 1583 ntBASIC4.01□□□□□ -1.77
TCRBV7S3A2A0A539 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.01□□□□□ -1.77
TCRBV7S3A2A0A539 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
TCRBV7S3A2A0A539 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
TCRBV7S3A2A0A539 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
TCRBV7S3A2A0A539 CCT4P2-201ENST00000233836 1548 ntBASIC4□□□□□ -1.77
TCRBV7S3A2A0A539 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
TCRBV7S3A2A0A539 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC4□□□□□ -1.77
TCRBV7S3A2A0A539 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC4□□□□□ -1.77
TCRBV7S3A2A0A539 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
TCRBV7S3A2A0A539 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4□□□□□ -1.77
TCRBV7S3A2A0A539 AP002001.2-201ENST00000529025 1469 ntBASIC4□□□□□ -1.77
TCRBV7S3A2A0A539 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC4□□□□□ -1.77
TCRBV7S3A2A0A539 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
TCRBV7S3A2A0A539 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
TCRBV7S3A2A0A539 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4□□□□□ -1.77
TCRBV7S3A2A0A539 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
TCRBV7S3A2A0A539 RNVU1-3-201ENST00000364313 161 ntBASIC4□□□□□ -1.77
TCRBV7S3A2A0A539 RNA5SP130-201ENST00000364431 114 ntBASIC4□□□□□ -1.77
TCRBV7S3A2A0A539 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC4□□□□□ -1.77
TCRBV7S3A2A0A539 Y_RNA.517-201ENST00000384551 106 ntBASIC4□□□□□ -1.77
TCRBV7S3A2A0A539 RNU6-248P-201ENST00000410720 107 ntBASIC4□□□□□ -1.77
TCRBV7S3A2A0A539 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC4□□□□□ -1.77
TCRBV7S3A2A0A539 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC4□□□□□ -1.77
TCRBV7S3A2A0A539 TRIM60P9Y-201ENST00000438459 816 ntBASIC4□□□□□ -1.77
TCRBV7S3A2A0A539 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC4□□□□□ -1.77
TCRBV7S3A2A0A539 TRIM60P11Y-201ENST00000445313 801 ntBASIC4□□□□□ -1.77
TCRBV7S3A2A0A539 RPL7L1P1-201ENST00000448259 785 ntBASIC4□□□□□ -1.77
TCRBV7S3A2A0A539 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC4□□□□□ -1.77
TCRBV7S3A2A0A539 NUTF2P3-201ENST00000448540 384 ntBASIC4□□□□□ -1.77
TCRBV7S3A2A0A539 AL500522.2-201ENST00000448562 343 ntBASIC4□□□□□ -1.77
TCRBV7S3A2A0A539 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC4□□□□□ -1.77
TCRBV7S3A2A0A539 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC4□□□□□ -1.77
TCRBV7S3A2A0A539 AL033528.1-201ENST00000453780 140 ntBASIC4□□□□□ -1.77
TCRBV7S3A2A0A539 HMGB1P15-201ENST00000453854 435 ntBASIC4□□□□□ -1.77
TCRBV7S3A2A0A539 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC4□□□□□ -1.77
TCRBV7S3A2A0A539 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC4□□□□□ -1.77
TCRBV7S3A2A0A539 AL132838.2-201ENST00000492041 314 ntBASIC4□□□□□ -1.77
TCRBV7S3A2A0A539 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC4□□□□□ -1.77
TCRBV7S3A2A0A539 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC4□□□□□ -1.77
TCRBV7S3A2A0A539 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC4□□□□□ -1.77
TCRBV7S3A2A0A539 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC4□□□□□ -1.77
TCRBV7S3A2A0A539 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC4□□□□□ -1.77
TCRBV7S3A2A0A539 AC010625.1-201ENST00000511296 403 ntBASIC4□□□□□ -1.77
TCRBV7S3A2A0A539 AF131216.2-201ENST00000512316 564 ntBASIC4□□□□□ -1.77
TCRBV7S3A2A0A539 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC4□□□□□ -1.77
TCRBV7S3A2A0A539 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC4□□□□□ -1.77
TCRBV7S3A2A0A539 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC4□□□□□ -1.77
TCRBV7S3A2A0A539 MTND4LP18-201ENST00000526864 291 ntBASIC4□□□□□ -1.77
TCRBV7S3A2A0A539 OR8L1P-201ENST00000534005 955 ntBASIC4□□□□□ -1.77
TCRBV7S3A2A0A539 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC4□□□□□ -1.77
TCRBV7S3A2A0A539 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC4□□□□□ -1.77
TCRBV7S3A2A0A539 MIR4528-201ENST00000577763 90 ntBASIC4□□□□□ -1.77
TCRBV7S3A2A0A539 AC112191.3-201ENST00000604371 277 ntBASIC4□□□□□ -1.77
TCRBV7S3A2A0A539 AC091167.4-201ENST00000605079 184 ntBASIC4□□□□□ -1.77
TCRBV7S3A2A0A539 AC010680.4-201ENST00000605334 543 ntBASIC4□□□□□ -1.77
TCRBV7S3A2A0A539 AC004492.1-201ENST00000607036 742 ntBASIC4□□□□□ -1.77
TCRBV7S3A2A0A539 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC4□□□□□ -1.77
TCRBV7S3A2A0A539 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC4□□□□□ -1.77
TCRBV7S3A2A0A539 AC006338.2-201ENST00000616864 791 ntBASIC4□□□□□ -1.77
TCRBV7S3A2A0A539 AC138932.5-201ENST00000617759 563 ntBASIC4□□□□□ -1.77
TCRBV7S3A2A0A539 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC4□□□□□ -1.77
TCRBV7S3A2A0A539 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC4□□□□□ -1.77
TCRBV7S3A2A0A539 AL023881.1-201ENST00000621088 301 ntBASIC4□□□□□ -1.77
TCRBV7S3A2A0A539 AC068792.1-201ENST00000621354 417 ntBASIC4□□□□□ -1.77
TCRBV7S3A2A0A539 AC103858.2-201ENST00000621471 543 ntBASIC4□□□□□ -1.77
TCRBV7S3A2A0A539 MTCO1P24-201ENST00000515438 1558 ntBASIC4□□□□□ -1.77
TCRBV7S3A2A0A539 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
TCRBV7S3A2A0A539 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC4□□□□□ -1.77
TCRBV7S3A2A0A539 AC026951.1-201ENST00000559530 2459 ntBASIC4□□□□□ -1.77
TCRBV7S3A2A0A539 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC4□□□□□ -1.77
TCRBV7S3A2A0A539 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
TCRBV7S3A2A0A539 ANKRD20A10P-201ENST00000457591 1515 ntBASIC4□□□□□ -1.77
TCRBV7S3A2A0A539 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC4□□□□□ -1.77
TCRBV7S3A2A0A539 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
TCRBV7S3A2A0A539 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
TCRBV7S3A2A0A539 THUMPD3P1-201ENST00000506556 1480 ntBASIC3.99□□□□□ -1.77
TCRBV7S3A2A0A539 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
TCRBV7S3A2A0A539 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC3.99□□□□□ -1.77
TCRBV7S3A2A0A539 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC3.99□□□□□ -1.77
TCRBV7S3A2A0A539 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC3.99□□□□□ -1.77
TCRBV7S3A2A0A539 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC3.99□□□□□ -1.77
TCRBV7S3A2A0A539 AC126755.2-208ENST00000327792 462 ntBASIC3.99□□□□□ -1.77
TCRBV7S3A2A0A539 AC138969.1-213ENST00000331436 462 ntBASIC3.99□□□□□ -1.77
TCRBV7S3A2A0A539 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
TCRBV7S3A2A0A539 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC3.99□□□□□ -1.77
TCRBV7S3A2A0A539 RNU6-533P-201ENST00000384144 107 ntBASIC3.99□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms