Protein–RNA interactions for Protein: A0A1B0GU29

SMIM28, Small integral membrane protein 28, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM28A0A1B0GU29 AC022069.1-201ENST00000582910 658 ntBASIC3.23□□□□□ -1.89
SMIM28A0A1B0GU29 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC3.23□□□□□ -1.89
SMIM28A0A1B0GU29 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC3.23□□□□□ -1.89
SMIM28A0A1B0GU29 AP001542.2-201ENST00000593141 364 ntBASIC3.23□□□□□ -1.89
SMIM28A0A1B0GU29 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC3.23□□□□□ -1.89
SMIM28A0A1B0GU29 AC024933.1-201ENST00000608472 348 ntBASIC3.23□□□□□ -1.89
SMIM28A0A1B0GU29 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC3.23□□□□□ -1.89
SMIM28A0A1B0GU29 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
SMIM28A0A1B0GU29 AC008121.2-201ENST00000614647 523 ntBASIC3.23□□□□□ -1.89
SMIM28A0A1B0GU29 AC022306.3-201ENST00000619930 550 ntBASIC3.23□□□□□ -1.89
SMIM28A0A1B0GU29 AC098679.5-201ENST00000624394 571 ntBASIC3.23□□□□□ -1.89
SMIM28A0A1B0GU29 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
SMIM28A0A1B0GU29 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
SMIM28A0A1B0GU29 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
SMIM28A0A1B0GU29 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
SMIM28A0A1B0GU29 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.22□□□□□ -1.89
SMIM28A0A1B0GU29 RNA5SP383-201ENST00000362934 120 ntBASIC3.22□□□□□ -1.89
SMIM28A0A1B0GU29 RNU5E-10P-201ENST00000363506 118 ntBASIC3.22□□□□□ -1.89
SMIM28A0A1B0GU29 U3.11-201ENST00000364476 212 ntBASIC3.22□□□□□ -1.89
SMIM28A0A1B0GU29 RNA5SP189-201ENST00000364920 115 ntBASIC3.22□□□□□ -1.89
SMIM28A0A1B0GU29 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC3.22□□□□□ -1.89
SMIM28A0A1B0GU29 RNU6-1226P-201ENST00000384317 107 ntBASIC3.22□□□□□ -1.89
SMIM28A0A1B0GU29 RNU2-37P-201ENST00000410695 177 ntBASIC3.22□□□□□ -1.89
SMIM28A0A1B0GU29 AC069218.2-201ENST00000411665 344 ntBASIC3.22□□□□□ -1.89
SMIM28A0A1B0GU29 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC3.22□□□□□ -1.89
SMIM28A0A1B0GU29 AC233981.1-201ENST00000423224 461 ntBASIC3.22□□□□□ -1.89
SMIM28A0A1B0GU29 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC3.22□□□□□ -1.89
SMIM28A0A1B0GU29 RPS6P14-201ENST00000425165 719 ntBASIC3.22□□□□□ -1.89
SMIM28A0A1B0GU29 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC3.22□□□□□ -1.89
SMIM28A0A1B0GU29 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC3.22□□□□□ -1.89
SMIM28A0A1B0GU29 AL139132.1-201ENST00000431587 344 ntBASIC3.22□□□□□ -1.89
SMIM28A0A1B0GU29 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC3.22□□□□□ -1.89
SMIM28A0A1B0GU29 AC107083.1-201ENST00000439643 279 ntBASIC3.22□□□□□ -1.89
SMIM28A0A1B0GU29 RPS26P56-201ENST00000444468 240 ntBASIC3.22□□□□□ -1.89
SMIM28A0A1B0GU29 HMGB3P6-201ENST00000444896 598 ntBASIC3.22□□□□□ -1.89
SMIM28A0A1B0GU29 CEACAMP4-201ENST00000457676 421 ntBASIC3.22□□□□□ -1.89
SMIM28A0A1B0GU29 RPS4XP13-201ENST00000483219 789 ntBASIC3.22□□□□□ -1.89
SMIM28A0A1B0GU29 AC096576.1-201ENST00000489014 359 ntBASIC3.22□□□□□ -1.89
SMIM28A0A1B0GU29 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
SMIM28A0A1B0GU29 TRAV31-201ENST00000502780 342 ntBASIC3.22□□□□□ -1.89
SMIM28A0A1B0GU29 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
SMIM28A0A1B0GU29 PRELID3BP6-201ENST00000503839 571 ntBASIC3.22□□□□□ -1.89
SMIM28A0A1B0GU29 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
SMIM28A0A1B0GU29 AC096571.1-202ENST00000506634 735 ntBASIC3.22□□□□□ -1.89
SMIM28A0A1B0GU29 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
SMIM28A0A1B0GU29 RNU6-276P-201ENST00000516114 96 ntBASIC3.22□□□□□ -1.89
SMIM28A0A1B0GU29 SCARNA13-201ENST00000516672 275 ntBASIC3.22□□□□□ -1.89
SMIM28A0A1B0GU29 AC091163.3-201ENST00000518269 1144 ntBASIC3.22□□□□□ -1.89
SMIM28A0A1B0GU29 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC3.22□□□□□ -1.89
SMIM28A0A1B0GU29 AP001207.1-201ENST00000524051 481 ntBASIC3.22□□□□□ -1.89
SMIM28A0A1B0GU29 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC3.22□□□□□ -1.89
SMIM28A0A1B0GU29 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC3.22□□□□□ -1.89
SMIM28A0A1B0GU29 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC3.22□□□□□ -1.89
SMIM28A0A1B0GU29 AC024060.1-201ENST00000607052 494 ntBASIC3.22□□□□□ -1.89
SMIM28A0A1B0GU29 AL121652.1-201ENST00000608851 448 ntBASIC3.22□□□□□ -1.89
SMIM28A0A1B0GU29 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC3.22□□□□□ -1.89
SMIM28A0A1B0GU29 AC010608.3-201ENST00000625048 527 ntBASIC3.22□□□□□ -1.89
SMIM28A0A1B0GU29 AC117529.2-201ENST00000512159 2068 ntBASIC3.22□□□□□ -1.89
SMIM28A0A1B0GU29 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.22□□□□□ -1.89
SMIM28A0A1B0GU29 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
SMIM28A0A1B0GU29 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC3.22□□□□□ -1.89
SMIM28A0A1B0GU29 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.22□□□□□ -1.89
SMIM28A0A1B0GU29 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.89
SMIM28A0A1B0GU29 AL359893.1-201ENST00000447628 1580 ntBASIC3.21□□□□□ -1.89
SMIM28A0A1B0GU29 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.21□□□□□ -1.9
SMIM28A0A1B0GU29 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
SMIM28A0A1B0GU29 SNORA31-201ENST00000362607 130 ntBASIC3.21□□□□□ -1.9
SMIM28A0A1B0GU29 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.9
SMIM28A0A1B0GU29 PARD3-204ENST00000374768 799 ntTSL 3 BASIC3.21□□□□□ -1.9
SMIM28A0A1B0GU29 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC3.21□□□□□ -1.9
SMIM28A0A1B0GU29 MIR634-201ENST00000385208 97 ntBASIC3.21□□□□□ -1.9
SMIM28A0A1B0GU29 U3.26-201ENST00000391236 204 ntBASIC3.21□□□□□ -1.9
SMIM28A0A1B0GU29 EIF5P1-201ENST00000400019 1231 ntBASIC3.21□□□□□ -1.9
SMIM28A0A1B0GU29 AL136133.1-201ENST00000413694 376 ntBASIC3.21□□□□□ -1.9
SMIM28A0A1B0GU29 AC009237.5-201ENST00000414271 501 ntBASIC3.21□□□□□ -1.9
SMIM28A0A1B0GU29 GTF2IP23-201ENST00000423746 351 ntBASIC3.21□□□□□ -1.9
SMIM28A0A1B0GU29 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC3.21□□□□□ -1.9
SMIM28A0A1B0GU29 AC114973.1-201ENST00000429057 632 ntBASIC3.21□□□□□ -1.9
SMIM28A0A1B0GU29 RPL31P54-201ENST00000429803 370 ntBASIC3.21□□□□□ -1.9
SMIM28A0A1B0GU29 CKS1BP5-201ENST00000434172 273 ntBASIC3.21□□□□□ -1.9
SMIM28A0A1B0GU29 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC3.21□□□□□ -1.9
SMIM28A0A1B0GU29 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC3.21□□□□□ -1.9
SMIM28A0A1B0GU29 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
SMIM28A0A1B0GU29 IGKV2D-23-201ENST00000518179 286 ntBASIC3.21□□□□□ -1.9
SMIM28A0A1B0GU29 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
SMIM28A0A1B0GU29 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC3.21□□□□□ -1.9
SMIM28A0A1B0GU29 ZKSCAN7P1-201ENST00000543668 673 ntBASIC3.21□□□□□ -1.9
SMIM28A0A1B0GU29 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
SMIM28A0A1B0GU29 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC3.21□□□□□ -1.9
SMIM28A0A1B0GU29 SNORD39.3-201ENST00000584451 71 ntBASIC3.21□□□□□ -1.9
SMIM28A0A1B0GU29 AC091057.3-201ENST00000602684 733 ntBASIC3.21□□□□□ -1.9
SMIM28A0A1B0GU29 AL445435.1-201ENST00000604232 665 ntBASIC3.21□□□□□ -1.9
SMIM28A0A1B0GU29 AC073387.2-201ENST00000604797 784 ntBASIC3.21□□□□□ -1.9
SMIM28A0A1B0GU29 AC097504.2-201ENST00000608088 454 ntBASIC3.21□□□□□ -1.9
SMIM28A0A1B0GU29 AC104763.3-201ENST00000613765 618 ntBASIC3.21□□□□□ -1.9
SMIM28A0A1B0GU29 MIR4278-201ENST00000636094 69 ntBASIC3.21□□□□□ -1.9
SMIM28A0A1B0GU29 SRP72P2-201ENST00000344851 1979 ntBASIC3.21□□□□□ -1.9
SMIM28A0A1B0GU29 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
SMIM28A0A1B0GU29 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
SMIM28A0A1B0GU29 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.21□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 127.6 ms