Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 AC092447.7-201ENST00000422212 1621 ntBASIC4.23□□□□□ -1.73
CCDC187A0A096LP49 LARP1BP1-201ENST00000506036 1359 ntBASIC4.23□□□□□ -1.73
CCDC187A0A096LP49 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CCDC187A0A096LP49 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
CCDC187A0A096LP49 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
CCDC187A0A096LP49 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC4.23□□□□□ -1.73
CCDC187A0A096LP49 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.23□□□□□ -1.73
CCDC187A0A096LP49 AL136964.1-201ENST00000622038 2990 ntBASIC4.23□□□□□ -1.73
CCDC187A0A096LP49 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CCDC187A0A096LP49 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.22□□□□□ -1.73
CCDC187A0A096LP49 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.22□□□□□ -1.73
CCDC187A0A096LP49 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC4.22□□□□□ -1.73
CCDC187A0A096LP49 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CCDC187A0A096LP49 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC4.22□□□□□ -1.73
CCDC187A0A096LP49 NUP58P1-201ENST00000502546 1738 ntBASIC4.22□□□□□ -1.73
CCDC187A0A096LP49 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC4.22□□□□□ -1.73
CCDC187A0A096LP49 RNU6-28P-201ENST00000362378 107 ntBASIC4.22□□□□□ -1.73
CCDC187A0A096LP49 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CCDC187A0A096LP49 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC4.22□□□□□ -1.73
CCDC187A0A096LP49 RNU6-533P-201ENST00000384144 107 ntBASIC4.22□□□□□ -1.73
CCDC187A0A096LP49 RNU6-348P-201ENST00000384386 107 ntBASIC4.22□□□□□ -1.73
CCDC187A0A096LP49 AL121834.1-202ENST00000404494 277 ntBASIC4.22□□□□□ -1.73
CCDC187A0A096LP49 AL080315.1-201ENST00000406055 466 ntBASIC4.22□□□□□ -1.73
CCDC187A0A096LP49 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC4.22□□□□□ -1.73
CCDC187A0A096LP49 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC4.22□□□□□ -1.73
CCDC187A0A096LP49 CKS1BP6-201ENST00000424932 240 ntBASIC4.22□□□□□ -1.73
CCDC187A0A096LP49 RWDD4P2-201ENST00000426392 563 ntBASIC4.22□□□□□ -1.73
CCDC187A0A096LP49 AL590233.1-201ENST00000430017 456 ntBASIC4.22□□□□□ -1.73
CCDC187A0A096LP49 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC4.22□□□□□ -1.73
CCDC187A0A096LP49 AC127537.2-201ENST00000439258 465 ntBASIC4.22□□□□□ -1.73
CCDC187A0A096LP49 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC4.22□□□□□ -1.73
CCDC187A0A096LP49 RPL7P36-201ENST00000444633 681 ntBASIC4.22□□□□□ -1.73
CCDC187A0A096LP49 TPT1P14-201ENST00000448018 505 ntBASIC4.22□□□□□ -1.73
CCDC187A0A096LP49 AC004924.1-201ENST00000480160 781 ntBASIC4.22□□□□□ -1.73
CCDC187A0A096LP49 PRDX4P1-201ENST00000507189 574 ntBASIC4.22□□□□□ -1.73
CCDC187A0A096LP49 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC4.22□□□□□ -1.73
CCDC187A0A096LP49 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CCDC187A0A096LP49 AC108064.1-201ENST00000513791 460 ntBASIC4.22□□□□□ -1.73
CCDC187A0A096LP49 HIGD1AP3-201ENST00000515857 278 ntBASIC4.22□□□□□ -1.73
CCDC187A0A096LP49 AP003392.2-201ENST00000527269 208 ntBASIC4.22□□□□□ -1.73
CCDC187A0A096LP49 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC4.22□□□□□ -1.73
CCDC187A0A096LP49 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC4.22□□□□□ -1.73
CCDC187A0A096LP49 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC4.22□□□□□ -1.73
CCDC187A0A096LP49 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC4.22□□□□□ -1.73
CCDC187A0A096LP49 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC4.22□□□□□ -1.73
CCDC187A0A096LP49 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC4.22□□□□□ -1.73
CCDC187A0A096LP49 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC4.22□□□□□ -1.73
CCDC187A0A096LP49 AC009101.1-201ENST00000568135 242 ntBASIC4.22□□□□□ -1.73
CCDC187A0A096LP49 TPMTP1-201ENST00000592307 737 ntBASIC4.22□□□□□ -1.73
CCDC187A0A096LP49 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC4.22□□□□□ -1.73
CCDC187A0A096LP49 AC079587.1-201ENST00000603846 277 ntBASIC4.22□□□□□ -1.73
CCDC187A0A096LP49 AC091805.2-201ENST00000603848 235 ntBASIC4.22□□□□□ -1.73
CCDC187A0A096LP49 AC112230.1-201ENST00000604342 547 ntBASIC4.22□□□□□ -1.73
CCDC187A0A096LP49 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CCDC187A0A096LP49 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC4.22□□□□□ -1.73
CCDC187A0A096LP49 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC4.22□□□□□ -1.73
CCDC187A0A096LP49 AC128687.2-201ENST00000609657 566 ntBASIC4.22□□□□□ -1.73
CCDC187A0A096LP49 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CCDC187A0A096LP49 AL589743.7-201ENST00000612637 233 ntBASIC4.22□□□□□ -1.73
CCDC187A0A096LP49 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CCDC187A0A096LP49 SNX18P1Y-201ENST00000616231 511 ntBASIC4.22□□□□□ -1.73
CCDC187A0A096LP49 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CCDC187A0A096LP49 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CCDC187A0A096LP49 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC4.22□□□□□ -1.73
CCDC187A0A096LP49 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CCDC187A0A096LP49 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
CCDC187A0A096LP49 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CCDC187A0A096LP49 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC4.22□□□□□ -1.73
CCDC187A0A096LP49 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC4.22□□□□□ -1.73
CCDC187A0A096LP49 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC4.21□□□□□ -1.73
CCDC187A0A096LP49 ZNF734P-201ENST00000419494 1534 ntBASIC4.21□□□□□ -1.73
CCDC187A0A096LP49 AL158163.1-201ENST00000603915 1649 ntBASIC4.21□□□□□ -1.73
CCDC187A0A096LP49 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.21□□□□□ -1.74
CCDC187A0A096LP49 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.21□□□□□ -1.74
CCDC187A0A096LP49 ARHGAP42P3-201ENST00000443989 2508 ntBASIC4.21□□□□□ -1.74
CCDC187A0A096LP49 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.74
CCDC187A0A096LP49 AL161781.1-201ENST00000354277 403 ntBASIC4.21□□□□□ -1.74
CCDC187A0A096LP49 Y_RNA.11-201ENST00000362375 109 ntBASIC4.21□□□□□ -1.74
CCDC187A0A096LP49 RNVU1-3-201ENST00000364313 161 ntBASIC4.21□□□□□ -1.74
CCDC187A0A096LP49 RNU6-744P-201ENST00000365557 107 ntBASIC4.21□□□□□ -1.74
CCDC187A0A096LP49 RNU6-1316P-201ENST00000384242 108 ntBASIC4.21□□□□□ -1.74
CCDC187A0A096LP49 RNU6-809P-201ENST00000384461 107 ntBASIC4.21□□□□□ -1.74
CCDC187A0A096LP49 SNORA40.3-201ENST00000390964 122 ntBASIC4.21□□□□□ -1.74
CCDC187A0A096LP49 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC4.21□□□□□ -1.74
CCDC187A0A096LP49 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC4.21□□□□□ -1.74
CCDC187A0A096LP49 USP9YP13-201ENST00000417797 480 ntBASIC4.21□□□□□ -1.74
CCDC187A0A096LP49 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC4.21□□□□□ -1.74
CCDC187A0A096LP49 PSMA6P3-201ENST00000428242 164 ntBASIC4.21□□□□□ -1.74
CCDC187A0A096LP49 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC4.21□□□□□ -1.74
CCDC187A0A096LP49 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC4.21□□□□□ -1.74
CCDC187A0A096LP49 SDCBPP1-201ENST00000440192 890 ntBASIC4.21□□□□□ -1.74
CCDC187A0A096LP49 AL590365.1-201ENST00000450788 243 ntBASIC4.21□□□□□ -1.74
CCDC187A0A096LP49 AL033528.1-201ENST00000453780 140 ntBASIC4.21□□□□□ -1.74
CCDC187A0A096LP49 HMGB1P15-201ENST00000453854 435 ntBASIC4.21□□□□□ -1.74
CCDC187A0A096LP49 BTF3P5-201ENST00000457252 467 ntBASIC4.21□□□□□ -1.74
CCDC187A0A096LP49 snoU109.1-201ENST00000459339 135 ntBASIC4.21□□□□□ -1.74
CCDC187A0A096LP49 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC4.21□□□□□ -1.74
CCDC187A0A096LP49 ALG13-211ENST00000473389 693 ntTSL 2 BASIC4.21□□□□□ -1.74
CCDC187A0A096LP49 AP001025.2-201ENST00000490908 477 ntBASIC4.21□□□□□ -1.74
CCDC187A0A096LP49 RN7SL812P-201ENST00000493791 279 ntBASIC4.21□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms