Protein–RNA interactions for Protein: Q9C0K7

STRADB, STE20-related kinase adapter protein beta, humanhuman

Predictions only

Length 418 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
STRADBQ9C0K7 AL691432.2-201ENST00000607222 2038 ntBASIC18.23■□□□□ 0.51
STRADBQ9C0K7 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC18.23■□□□□ 0.51
STRADBQ9C0K7 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
STRADBQ9C0K7 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
STRADBQ9C0K7 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
STRADBQ9C0K7 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC18.22■□□□□ 0.51
STRADBQ9C0K7 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
STRADBQ9C0K7 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC18.22■□□□□ 0.51
STRADBQ9C0K7 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
STRADBQ9C0K7 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
STRADBQ9C0K7 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC18.22■□□□□ 0.51
STRADBQ9C0K7 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
STRADBQ9C0K7 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
STRADBQ9C0K7 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
STRADBQ9C0K7 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
STRADBQ9C0K7 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
STRADBQ9C0K7 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
STRADBQ9C0K7 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC18.22■□□□□ 0.51
STRADBQ9C0K7 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
STRADBQ9C0K7 PTK2-216ENST00000519881 863 ntTSL 3 BASIC18.22■□□□□ 0.51
STRADBQ9C0K7 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC18.22■□□□□ 0.51
STRADBQ9C0K7 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
STRADBQ9C0K7 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC18.22■□□□□ 0.51
STRADBQ9C0K7 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC18.22■□□□□ 0.51
STRADBQ9C0K7 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
STRADBQ9C0K7 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
STRADBQ9C0K7 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
STRADBQ9C0K7 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
STRADBQ9C0K7 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
STRADBQ9C0K7 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
STRADBQ9C0K7 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
STRADBQ9C0K7 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
STRADBQ9C0K7 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
STRADBQ9C0K7 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC18.21■□□□□ 0.51
STRADBQ9C0K7 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC18.21■□□□□ 0.51
STRADBQ9C0K7 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
STRADBQ9C0K7 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC18.21■□□□□ 0.51
STRADBQ9C0K7 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
STRADBQ9C0K7 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC18.21■□□□□ 0.51
STRADBQ9C0K7 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
STRADBQ9C0K7 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC18.21■□□□□ 0.51
STRADBQ9C0K7 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC18.21■□□□□ 0.51
STRADBQ9C0K7 BET1L-202ENST00000332865 533 ntTSL 5 BASIC18.21■□□□□ 0.51
STRADBQ9C0K7 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
STRADBQ9C0K7 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC18.21■□□□□ 0.51
STRADBQ9C0K7 AL450487.1-201ENST00000426799 995 ntBASIC18.21■□□□□ 0.51
STRADBQ9C0K7 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC18.21■□□□□ 0.51
STRADBQ9C0K7 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC18.21■□□□□ 0.51
STRADBQ9C0K7 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
STRADBQ9C0K7 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC18.21■□□□□ 0.51
STRADBQ9C0K7 AC034232.1-201ENST00000506026 1064 ntBASIC18.21■□□□□ 0.51
STRADBQ9C0K7 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC18.21■□□□□ 0.51
STRADBQ9C0K7 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC18.21■□□□□ 0.51
STRADBQ9C0K7 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC18.21■□□□□ 0.51
STRADBQ9C0K7 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC18.21■□□□□ 0.51
STRADBQ9C0K7 FGF14-AS2-201ENST00000606448 1074 ntBASIC18.21■□□□□ 0.51
STRADBQ9C0K7 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
STRADBQ9C0K7 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
STRADBQ9C0K7 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC18.21■□□□□ 0.51
STRADBQ9C0K7 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
STRADBQ9C0K7 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.5
STRADBQ9C0K7 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC18.21■□□□□ 0.5
STRADBQ9C0K7 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.5
STRADBQ9C0K7 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC18.21■□□□□ 0.5
STRADBQ9C0K7 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
STRADBQ9C0K7 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC18.2■□□□□ 0.5
STRADBQ9C0K7 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
STRADBQ9C0K7 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
STRADBQ9C0K7 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
STRADBQ9C0K7 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
STRADBQ9C0K7 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
STRADBQ9C0K7 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
STRADBQ9C0K7 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
STRADBQ9C0K7 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
STRADBQ9C0K7 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
STRADBQ9C0K7 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
STRADBQ9C0K7 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC18.2■□□□□ 0.5
STRADBQ9C0K7 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC18.2■□□□□ 0.5
STRADBQ9C0K7 AC083849.1-201ENST00000615227 514 ntBASIC18.2■□□□□ 0.5
STRADBQ9C0K7 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC18.2■□□□□ 0.5
STRADBQ9C0K7 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
STRADBQ9C0K7 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
STRADBQ9C0K7 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
STRADBQ9C0K7 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC18.2■□□□□ 0.5
STRADBQ9C0K7 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
STRADBQ9C0K7 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC18.2■□□□□ 0.5
STRADBQ9C0K7 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
STRADBQ9C0K7 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
STRADBQ9C0K7 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC18.2■□□□□ 0.5
STRADBQ9C0K7 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC18.2■□□□□ 0.5
STRADBQ9C0K7 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC18.2■□□□□ 0.5
STRADBQ9C0K7 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
STRADBQ9C0K7 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
STRADBQ9C0K7 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
STRADBQ9C0K7 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
STRADBQ9C0K7 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC18.19■□□□□ 0.5
STRADBQ9C0K7 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
STRADBQ9C0K7 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
STRADBQ9C0K7 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
STRADBQ9C0K7 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 67.8 ms