Protein–RNA interactions for Protein: Q9C0C9

UBE2O, (E3-independent) E2 ubiquitin-conjugating enzyme, humanhuman

Known RBP Predictions only

Length 1,292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2OQ9C0C9 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC21.14■□□□□ 0.97
UBE2OQ9C0C9 LINC01711-201ENST00000598340 967 ntBASIC21.14■□□□□ 0.97
UBE2OQ9C0C9 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
UBE2OQ9C0C9 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC21.14■□□□□ 0.97
UBE2OQ9C0C9 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC21.14■□□□□ 0.97
UBE2OQ9C0C9 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
UBE2OQ9C0C9 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC21.14■□□□□ 0.97
UBE2OQ9C0C9 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC21.14■□□□□ 0.97
UBE2OQ9C0C9 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
UBE2OQ9C0C9 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC21.14■□□□□ 0.97
UBE2OQ9C0C9 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC21.14■□□□□ 0.97
UBE2OQ9C0C9 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
UBE2OQ9C0C9 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC21.13■□□□□ 0.97
UBE2OQ9C0C9 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC21.13■□□□□ 0.97
UBE2OQ9C0C9 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
UBE2OQ9C0C9 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
UBE2OQ9C0C9 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC21.13■□□□□ 0.97
UBE2OQ9C0C9 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
UBE2OQ9C0C9 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
UBE2OQ9C0C9 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
UBE2OQ9C0C9 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC21.13■□□□□ 0.97
UBE2OQ9C0C9 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC21.13■□□□□ 0.97
UBE2OQ9C0C9 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC21.13■□□□□ 0.97
UBE2OQ9C0C9 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
UBE2OQ9C0C9 BX119927.1-201ENST00000636596 1552 ntBASIC21.13■□□□□ 0.97
UBE2OQ9C0C9 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
UBE2OQ9C0C9 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
UBE2OQ9C0C9 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
UBE2OQ9C0C9 TSPY19P-201ENST00000418461 509 ntBASIC21.12■□□□□ 0.97
UBE2OQ9C0C9 TSPY18P-201ENST00000441642 509 ntBASIC21.12■□□□□ 0.97
UBE2OQ9C0C9 AP002383.4-201ENST00000442518 975 ntBASIC21.12■□□□□ 0.97
UBE2OQ9C0C9 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC21.12■□□□□ 0.97
UBE2OQ9C0C9 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC21.12■□□□□ 0.97
UBE2OQ9C0C9 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC21.12■□□□□ 0.97
UBE2OQ9C0C9 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC21.12■□□□□ 0.97
UBE2OQ9C0C9 AC091304.2-201ENST00000564639 760 ntBASIC21.12■□□□□ 0.97
UBE2OQ9C0C9 AP002414.4-201ENST00000589764 1148 ntBASIC21.12■□□□□ 0.97
UBE2OQ9C0C9 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
UBE2OQ9C0C9 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
UBE2OQ9C0C9 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
UBE2OQ9C0C9 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
UBE2OQ9C0C9 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC21.11■□□□□ 0.97
UBE2OQ9C0C9 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
UBE2OQ9C0C9 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC21.11■□□□□ 0.97
UBE2OQ9C0C9 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
UBE2OQ9C0C9 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
UBE2OQ9C0C9 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC21.11■□□□□ 0.97
UBE2OQ9C0C9 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC21.11■□□□□ 0.97
UBE2OQ9C0C9 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
UBE2OQ9C0C9 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC21.11■□□□□ 0.97
UBE2OQ9C0C9 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC21.11■□□□□ 0.97
UBE2OQ9C0C9 AL662844.1-201ENST00000546340 181 ntBASIC21.11■□□□□ 0.97
UBE2OQ9C0C9 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC21.11■□□□□ 0.97
UBE2OQ9C0C9 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
UBE2OQ9C0C9 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC21.11■□□□□ 0.97
UBE2OQ9C0C9 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
UBE2OQ9C0C9 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC21.11■□□□□ 0.97
UBE2OQ9C0C9 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
UBE2OQ9C0C9 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC21.1■□□□□ 0.97
UBE2OQ9C0C9 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
UBE2OQ9C0C9 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
UBE2OQ9C0C9 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC21.1■□□□□ 0.97
UBE2OQ9C0C9 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
UBE2OQ9C0C9 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
UBE2OQ9C0C9 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC21.1■□□□□ 0.97
UBE2OQ9C0C9 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
UBE2OQ9C0C9 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
UBE2OQ9C0C9 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
UBE2OQ9C0C9 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
UBE2OQ9C0C9 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC21.1■□□□□ 0.97
UBE2OQ9C0C9 AC106795.1-205ENST00000512851 1056 ntBASIC21.1■□□□□ 0.97
UBE2OQ9C0C9 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC21.1■□□□□ 0.97
UBE2OQ9C0C9 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC21.1■□□□□ 0.97
UBE2OQ9C0C9 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC21.1■□□□□ 0.97
UBE2OQ9C0C9 SLC25A6P4-201ENST00000586535 553 ntBASIC21.1■□□□□ 0.97
UBE2OQ9C0C9 IL11-204ENST00000590625 1028 ntTSL 2 BASIC21.1■□□□□ 0.97
UBE2OQ9C0C9 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
UBE2OQ9C0C9 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
UBE2OQ9C0C9 AL671883.3-201ENST00000603274 991 ntBASIC21.1■□□□□ 0.97
UBE2OQ9C0C9 AL121772.3-201ENST00000610840 674 ntBASIC21.1■□□□□ 0.97
UBE2OQ9C0C9 AC120114.3-201ENST00000611923 658 ntBASIC21.1■□□□□ 0.97
UBE2OQ9C0C9 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
UBE2OQ9C0C9 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
UBE2OQ9C0C9 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
UBE2OQ9C0C9 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
UBE2OQ9C0C9 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
UBE2OQ9C0C9 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC21.09■□□□□ 0.97
UBE2OQ9C0C9 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
UBE2OQ9C0C9 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC21.09■□□□□ 0.97
UBE2OQ9C0C9 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
UBE2OQ9C0C9 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
UBE2OQ9C0C9 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
UBE2OQ9C0C9 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
UBE2OQ9C0C9 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
UBE2OQ9C0C9 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
UBE2OQ9C0C9 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
UBE2OQ9C0C9 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC21.09■□□□□ 0.97
UBE2OQ9C0C9 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC21.09■□□□□ 0.97
UBE2OQ9C0C9 AP002469.2-201ENST00000531724 424 ntBASIC21.09■□□□□ 0.97
UBE2OQ9C0C9 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms