Protein–RNA interactions for Protein: Q9BYR4

KRTAP4-3, Keratin-associated protein 4-3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-3Q9BYR4 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC6.52□□□□□ -1.37
KRTAP4-3Q9BYR4 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
KRTAP4-3Q9BYR4 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
KRTAP4-3Q9BYR4 KRT8P45-201ENST00000414328 1447 ntBASIC6.52□□□□□ -1.37
KRTAP4-3Q9BYR4 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
KRTAP4-3Q9BYR4 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC6.52□□□□□ -1.37
KRTAP4-3Q9BYR4 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
KRTAP4-3Q9BYR4 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
KRTAP4-3Q9BYR4 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
KRTAP4-3Q9BYR4 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC6.52□□□□□ -1.37
KRTAP4-3Q9BYR4 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
KRTAP4-3Q9BYR4 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC6.52□□□□□ -1.37
KRTAP4-3Q9BYR4 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
KRTAP4-3Q9BYR4 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
KRTAP4-3Q9BYR4 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
KRTAP4-3Q9BYR4 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC6.52□□□□□ -1.37
KRTAP4-3Q9BYR4 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
KRTAP4-3Q9BYR4 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC6.52□□□□□ -1.37
KRTAP4-3Q9BYR4 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC6.52□□□□□ -1.37
KRTAP4-3Q9BYR4 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC6.52□□□□□ -1.37
KRTAP4-3Q9BYR4 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
KRTAP4-3Q9BYR4 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC6.52□□□□□ -1.37
KRTAP4-3Q9BYR4 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC6.52□□□□□ -1.37
KRTAP4-3Q9BYR4 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
KRTAP4-3Q9BYR4 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC6.52□□□□□ -1.37
KRTAP4-3Q9BYR4 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC6.52□□□□□ -1.37
KRTAP4-3Q9BYR4 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC6.52□□□□□ -1.37
KRTAP4-3Q9BYR4 AP003041.3-201ENST00000527151 707 ntBASIC6.52□□□□□ -1.37
KRTAP4-3Q9BYR4 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
KRTAP4-3Q9BYR4 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC6.52□□□□□ -1.37
KRTAP4-3Q9BYR4 EGLN1P1-201ENST00000531623 762 ntBASIC6.52□□□□□ -1.37
KRTAP4-3Q9BYR4 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC6.52□□□□□ -1.37
KRTAP4-3Q9BYR4 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC6.52□□□□□ -1.37
KRTAP4-3Q9BYR4 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC6.52□□□□□ -1.37
KRTAP4-3Q9BYR4 NT5C-211ENST00000582170 653 ntTSL 3 BASIC6.52□□□□□ -1.37
KRTAP4-3Q9BYR4 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC6.52□□□□□ -1.37
KRTAP4-3Q9BYR4 GRAMD4P8-201ENST00000605465 1115 ntBASIC6.52□□□□□ -1.37
KRTAP4-3Q9BYR4 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC6.52□□□□□ -1.37
KRTAP4-3Q9BYR4 AC008622.2-201ENST00000617006 1229 ntBASIC6.52□□□□□ -1.37
KRTAP4-3Q9BYR4 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC6.52□□□□□ -1.37
KRTAP4-3Q9BYR4 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
KRTAP4-3Q9BYR4 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
KRTAP4-3Q9BYR4 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC6.52□□□□□ -1.37
KRTAP4-3Q9BYR4 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
KRTAP4-3Q9BYR4 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC6.52□□□□□ -1.37
KRTAP4-3Q9BYR4 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC6.52□□□□□ -1.37
KRTAP4-3Q9BYR4 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
KRTAP4-3Q9BYR4 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC6.52□□□□□ -1.37
KRTAP4-3Q9BYR4 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC6.52□□□□□ -1.37
KRTAP4-3Q9BYR4 AC096733.2-201ENST00000609937 1394 ntBASIC6.52□□□□□ -1.37
KRTAP4-3Q9BYR4 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
KRTAP4-3Q9BYR4 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
KRTAP4-3Q9BYR4 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
KRTAP4-3Q9BYR4 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC6.52□□□□□ -1.37
KRTAP4-3Q9BYR4 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
KRTAP4-3Q9BYR4 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
KRTAP4-3Q9BYR4 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
KRTAP4-3Q9BYR4 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
KRTAP4-3Q9BYR4 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC6.52□□□□□ -1.37
KRTAP4-3Q9BYR4 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
KRTAP4-3Q9BYR4 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
KRTAP4-3Q9BYR4 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
KRTAP4-3Q9BYR4 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC6.52□□□□□ -1.37
KRTAP4-3Q9BYR4 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC6.52□□□□□ -1.37
KRTAP4-3Q9BYR4 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC6.52□□□□□ -1.37
KRTAP4-3Q9BYR4 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
KRTAP4-3Q9BYR4 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
KRTAP4-3Q9BYR4 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
KRTAP4-3Q9BYR4 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC6.52□□□□□ -1.37
KRTAP4-3Q9BYR4 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
KRTAP4-3Q9BYR4 TP73-202ENST00000354437 2140 ntTSL 5 BASIC6.52□□□□□ -1.37
KRTAP4-3Q9BYR4 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
KRTAP4-3Q9BYR4 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC6.52□□□□□ -1.37
KRTAP4-3Q9BYR4 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
KRTAP4-3Q9BYR4 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
KRTAP4-3Q9BYR4 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
KRTAP4-3Q9BYR4 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
KRTAP4-3Q9BYR4 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
KRTAP4-3Q9BYR4 ANKRD18DP-204ENST00000455355 1975 ntBASIC6.51□□□□□ -1.37
KRTAP4-3Q9BYR4 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
KRTAP4-3Q9BYR4 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC6.51□□□□□ -1.37
KRTAP4-3Q9BYR4 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
KRTAP4-3Q9BYR4 AC092338.2-201ENST00000568827 1415 ntBASIC6.51□□□□□ -1.37
KRTAP4-3Q9BYR4 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC6.51□□□□□ -1.37
KRTAP4-3Q9BYR4 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
KRTAP4-3Q9BYR4 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
KRTAP4-3Q9BYR4 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC6.51□□□□□ -1.37
KRTAP4-3Q9BYR4 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC6.51□□□□□ -1.37
KRTAP4-3Q9BYR4 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
KRTAP4-3Q9BYR4 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC6.51□□□□□ -1.37
KRTAP4-3Q9BYR4 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC6.51□□□□□ -1.37
KRTAP4-3Q9BYR4 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
KRTAP4-3Q9BYR4 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC6.51□□□□□ -1.37
KRTAP4-3Q9BYR4 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
KRTAP4-3Q9BYR4 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
KRTAP4-3Q9BYR4 ZNF815P-204ENST00000434898 1737 ntBASIC6.51□□□□□ -1.37
KRTAP4-3Q9BYR4 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
KRTAP4-3Q9BYR4 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC6.51□□□□□ -1.37
KRTAP4-3Q9BYR4 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
KRTAP4-3Q9BYR4 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms