Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 AC024243.1-201ENST00000609234 778 ntBASIC18.66■□□□□ 0.58
RIF1Q5UIP0 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC18.66■□□□□ 0.58
RIF1Q5UIP0 TMEM179-206ENST00000616017 1645 ntBASIC18.66■□□□□ 0.58
RIF1Q5UIP0 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC18.66■□□□□ 0.58
RIF1Q5UIP0 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RIF1Q5UIP0 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RIF1Q5UIP0 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
RIF1Q5UIP0 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC18.65■□□□□ 0.58
RIF1Q5UIP0 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
RIF1Q5UIP0 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
RIF1Q5UIP0 KRT8P11-201ENST00000409686 1436 ntBASIC18.65■□□□□ 0.58
RIF1Q5UIP0 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC18.65■□□□□ 0.58
RIF1Q5UIP0 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RIF1Q5UIP0 SCARNA2-201ENST00000458748 420 ntBASIC18.65■□□□□ 0.58
RIF1Q5UIP0 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
RIF1Q5UIP0 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
RIF1Q5UIP0 AL356488.2-201ENST00000602755 427 ntBASIC18.65■□□□□ 0.58
RIF1Q5UIP0 AC099336.1-202ENST00000602961 463 ntBASIC18.65■□□□□ 0.58
RIF1Q5UIP0 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RIF1Q5UIP0 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RIF1Q5UIP0 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC18.65■□□□□ 0.58
RIF1Q5UIP0 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RIF1Q5UIP0 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RIF1Q5UIP0 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
RIF1Q5UIP0 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC18.65■□□□□ 0.58
RIF1Q5UIP0 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RIF1Q5UIP0 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
RIF1Q5UIP0 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC18.65■□□□□ 0.58
RIF1Q5UIP0 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC18.65■□□□□ 0.58
RIF1Q5UIP0 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RIF1Q5UIP0 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RIF1Q5UIP0 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RIF1Q5UIP0 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RIF1Q5UIP0 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RIF1Q5UIP0 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RIF1Q5UIP0 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC18.65■□□□□ 0.58
RIF1Q5UIP0 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC18.65■□□□□ 0.58
RIF1Q5UIP0 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC18.64■□□□□ 0.58
RIF1Q5UIP0 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
RIF1Q5UIP0 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
RIF1Q5UIP0 GPX1P2-201ENST00000429271 606 ntBASIC18.64■□□□□ 0.58
RIF1Q5UIP0 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC18.64■□□□□ 0.58
RIF1Q5UIP0 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
RIF1Q5UIP0 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
RIF1Q5UIP0 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC18.64■□□□□ 0.58
RIF1Q5UIP0 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC18.64■□□□□ 0.58
RIF1Q5UIP0 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC18.64■□□□□ 0.58
RIF1Q5UIP0 CAND2-206ENST00000626378 333 ntTSL 5 BASIC18.64■□□□□ 0.58
RIF1Q5UIP0 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC18.64■□□□□ 0.58
RIF1Q5UIP0 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC18.64■□□□□ 0.57
RIF1Q5UIP0 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RIF1Q5UIP0 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
RIF1Q5UIP0 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
RIF1Q5UIP0 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC18.64■□□□□ 0.57
RIF1Q5UIP0 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC18.64■□□□□ 0.57
RIF1Q5UIP0 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
RIF1Q5UIP0 CCNC-219ENST00000627680 896 ntTSL 5 BASIC18.64■□□□□ 0.57
RIF1Q5UIP0 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
RIF1Q5UIP0 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
RIF1Q5UIP0 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RIF1Q5UIP0 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RIF1Q5UIP0 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RIF1Q5UIP0 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
RIF1Q5UIP0 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
RIF1Q5UIP0 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RIF1Q5UIP0 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RIF1Q5UIP0 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
RIF1Q5UIP0 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC18.63■□□□□ 0.57
RIF1Q5UIP0 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC18.63■□□□□ 0.57
RIF1Q5UIP0 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC18.63■□□□□ 0.57
RIF1Q5UIP0 AC090616.6-201ENST00000582640 721 ntBASIC18.63■□□□□ 0.57
RIF1Q5UIP0 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC18.63■□□□□ 0.57
RIF1Q5UIP0 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC18.63■□□□□ 0.57
RIF1Q5UIP0 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RIF1Q5UIP0 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC18.63■□□□□ 0.57
RIF1Q5UIP0 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC18.63■□□□□ 0.57
RIF1Q5UIP0 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RIF1Q5UIP0 TUB-203ENST00000534099 1759 ntTSL 2 BASIC18.63■□□□□ 0.57
RIF1Q5UIP0 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC18.63■□□□□ 0.57
RIF1Q5UIP0 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC18.63■□□□□ 0.57
RIF1Q5UIP0 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RIF1Q5UIP0 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RIF1Q5UIP0 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RIF1Q5UIP0 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
RIF1Q5UIP0 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RIF1Q5UIP0 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC18.63■□□□□ 0.57
RIF1Q5UIP0 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC18.63■□□□□ 0.57
RIF1Q5UIP0 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC18.63■□□□□ 0.57
RIF1Q5UIP0 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC18.63■□□□□ 0.57
RIF1Q5UIP0 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC18.63■□□□□ 0.57
RIF1Q5UIP0 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC18.63■□□□□ 0.57
RIF1Q5UIP0 AC092364.2-202ENST00000597012 1073 ntBASIC18.63■□□□□ 0.57
RIF1Q5UIP0 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC18.63■□□□□ 0.57
RIF1Q5UIP0 ZNF259P1-201ENST00000407656 1365 ntBASIC18.63■□□□□ 0.57
RIF1Q5UIP0 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RIF1Q5UIP0 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RIF1Q5UIP0 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC18.62■□□□□ 0.57
RIF1Q5UIP0 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
RIF1Q5UIP0 IMP4-203ENST00000409935 958 ntTSL 5 BASIC18.62■□□□□ 0.57
RIF1Q5UIP0 WBP2-203ENST00000433525 928 ntTSL 2 BASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 10.3 ms