Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 AC024243.1-201ENST00000609234 778 ntBASIC18.66■□□□□ 0.58
RIF1Q5UIP0 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC18.66■□□□□ 0.58
RIF1Q5UIP0 TMEM179-206ENST00000616017 1645 ntBASIC18.66■□□□□ 0.58
RIF1Q5UIP0 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC18.66■□□□□ 0.58
RIF1Q5UIP0 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RIF1Q5UIP0 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RIF1Q5UIP0 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
RIF1Q5UIP0 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC18.65■□□□□ 0.58
RIF1Q5UIP0 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
RIF1Q5UIP0 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
RIF1Q5UIP0 KRT8P11-201ENST00000409686 1436 ntBASIC18.65■□□□□ 0.58
RIF1Q5UIP0 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC18.65■□□□□ 0.58
RIF1Q5UIP0 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RIF1Q5UIP0 SCARNA2-201ENST00000458748 420 ntBASIC18.65■□□□□ 0.58
RIF1Q5UIP0 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
RIF1Q5UIP0 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
RIF1Q5UIP0 AL356488.2-201ENST00000602755 427 ntBASIC18.65■□□□□ 0.58
RIF1Q5UIP0 AC099336.1-202ENST00000602961 463 ntBASIC18.65■□□□□ 0.58
RIF1Q5UIP0 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RIF1Q5UIP0 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RIF1Q5UIP0 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC18.65■□□□□ 0.58
RIF1Q5UIP0 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RIF1Q5UIP0 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RIF1Q5UIP0 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
RIF1Q5UIP0 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC18.65■□□□□ 0.58
RIF1Q5UIP0 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RIF1Q5UIP0 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
RIF1Q5UIP0 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC18.65■□□□□ 0.58
RIF1Q5UIP0 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC18.65■□□□□ 0.58
RIF1Q5UIP0 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RIF1Q5UIP0 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RIF1Q5UIP0 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RIF1Q5UIP0 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RIF1Q5UIP0 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RIF1Q5UIP0 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RIF1Q5UIP0 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC18.65■□□□□ 0.58
RIF1Q5UIP0 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC18.65■□□□□ 0.58
RIF1Q5UIP0 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC18.64■□□□□ 0.58
RIF1Q5UIP0 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
RIF1Q5UIP0 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
RIF1Q5UIP0 GPX1P2-201ENST00000429271 606 ntBASIC18.64■□□□□ 0.58
RIF1Q5UIP0 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC18.64■□□□□ 0.58
RIF1Q5UIP0 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
RIF1Q5UIP0 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
RIF1Q5UIP0 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC18.64■□□□□ 0.58
RIF1Q5UIP0 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC18.64■□□□□ 0.58
RIF1Q5UIP0 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC18.64■□□□□ 0.58
RIF1Q5UIP0 CAND2-206ENST00000626378 333 ntTSL 5 BASIC18.64■□□□□ 0.58
RIF1Q5UIP0 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC18.64■□□□□ 0.58
RIF1Q5UIP0 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC18.64■□□□□ 0.57
RIF1Q5UIP0 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RIF1Q5UIP0 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
RIF1Q5UIP0 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
RIF1Q5UIP0 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC18.64■□□□□ 0.57
RIF1Q5UIP0 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC18.64■□□□□ 0.57
RIF1Q5UIP0 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
RIF1Q5UIP0 CCNC-219ENST00000627680 896 ntTSL 5 BASIC18.64■□□□□ 0.57
RIF1Q5UIP0 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
RIF1Q5UIP0 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
RIF1Q5UIP0 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RIF1Q5UIP0 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RIF1Q5UIP0 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RIF1Q5UIP0 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
RIF1Q5UIP0 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
RIF1Q5UIP0 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RIF1Q5UIP0 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RIF1Q5UIP0 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
RIF1Q5UIP0 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC18.63■□□□□ 0.57
RIF1Q5UIP0 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC18.63■□□□□ 0.57
RIF1Q5UIP0 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC18.63■□□□□ 0.57
RIF1Q5UIP0 AC090616.6-201ENST00000582640 721 ntBASIC18.63■□□□□ 0.57
RIF1Q5UIP0 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC18.63■□□□□ 0.57
RIF1Q5UIP0 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC18.63■□□□□ 0.57
RIF1Q5UIP0 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RIF1Q5UIP0 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC18.63■□□□□ 0.57
RIF1Q5UIP0 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC18.63■□□□□ 0.57
RIF1Q5UIP0 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RIF1Q5UIP0 TUB-203ENST00000534099 1759 ntTSL 2 BASIC18.63■□□□□ 0.57
RIF1Q5UIP0 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC18.63■□□□□ 0.57
RIF1Q5UIP0 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC18.63■□□□□ 0.57
RIF1Q5UIP0 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RIF1Q5UIP0 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RIF1Q5UIP0 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RIF1Q5UIP0 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
RIF1Q5UIP0 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RIF1Q5UIP0 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC18.63■□□□□ 0.57
RIF1Q5UIP0 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC18.63■□□□□ 0.57
RIF1Q5UIP0 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC18.63■□□□□ 0.57
RIF1Q5UIP0 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC18.63■□□□□ 0.57
RIF1Q5UIP0 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC18.63■□□□□ 0.57
RIF1Q5UIP0 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC18.63■□□□□ 0.57
RIF1Q5UIP0 AC092364.2-202ENST00000597012 1073 ntBASIC18.63■□□□□ 0.57
RIF1Q5UIP0 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC18.63■□□□□ 0.57
RIF1Q5UIP0 ZNF259P1-201ENST00000407656 1365 ntBASIC18.63■□□□□ 0.57
RIF1Q5UIP0 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RIF1Q5UIP0 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RIF1Q5UIP0 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC18.62■□□□□ 0.57
RIF1Q5UIP0 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
RIF1Q5UIP0 IMP4-203ENST00000409935 958 ntTSL 5 BASIC18.62■□□□□ 0.57
RIF1Q5UIP0 WBP2-203ENST00000433525 928 ntTSL 2 BASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms