Protein–RNA interactions for Protein: Q5SRH9

TTC39A, Tetratricopeptide repeat protein 39A, humanhuman

Predictions only

Length 613 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39AQ5SRH9 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
TTC39AQ5SRH9 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC23.38■■□□□ 1.33
TTC39AQ5SRH9 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC23.38■■□□□ 1.33
TTC39AQ5SRH9 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC23.38■■□□□ 1.33
TTC39AQ5SRH9 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
TTC39AQ5SRH9 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
TTC39AQ5SRH9 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC23.38■■□□□ 1.33
TTC39AQ5SRH9 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC23.38■■□□□ 1.33
TTC39AQ5SRH9 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC23.38■■□□□ 1.33
TTC39AQ5SRH9 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC23.38■■□□□ 1.33
TTC39AQ5SRH9 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
TTC39AQ5SRH9 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
TTC39AQ5SRH9 HIST1H2APS4-201ENST00000362070 348 ntBASIC23.37■■□□□ 1.33
TTC39AQ5SRH9 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC23.37■■□□□ 1.33
TTC39AQ5SRH9 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC23.37■■□□□ 1.33
TTC39AQ5SRH9 PRSS44-201ENST00000515154 1146 ntBASIC23.37■■□□□ 1.33
TTC39AQ5SRH9 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC23.37■■□□□ 1.33
TTC39AQ5SRH9 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC23.37■■□□□ 1.33
TTC39AQ5SRH9 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
TTC39AQ5SRH9 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC23.37■■□□□ 1.33
TTC39AQ5SRH9 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
TTC39AQ5SRH9 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
TTC39AQ5SRH9 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC23.37■■□□□ 1.33
TTC39AQ5SRH9 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
TTC39AQ5SRH9 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
TTC39AQ5SRH9 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC23.37■■□□□ 1.33
TTC39AQ5SRH9 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
TTC39AQ5SRH9 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC23.37■■□□□ 1.33
TTC39AQ5SRH9 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC23.37■■□□□ 1.33
TTC39AQ5SRH9 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC23.37■■□□□ 1.33
TTC39AQ5SRH9 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC23.36■■□□□ 1.33
TTC39AQ5SRH9 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
TTC39AQ5SRH9 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
TTC39AQ5SRH9 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
TTC39AQ5SRH9 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC23.36■■□□□ 1.33
TTC39AQ5SRH9 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
TTC39AQ5SRH9 TSPY14P-201ENST00000303979 915 ntBASIC23.36■■□□□ 1.33
TTC39AQ5SRH9 TSPY23P-201ENST00000440136 739 ntBASIC23.36■■□□□ 1.33
TTC39AQ5SRH9 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
TTC39AQ5SRH9 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
TTC39AQ5SRH9 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC23.36■■□□□ 1.33
TTC39AQ5SRH9 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC23.36■■□□□ 1.33
TTC39AQ5SRH9 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC23.36■■□□□ 1.33
TTC39AQ5SRH9 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC23.36■■□□□ 1.33
TTC39AQ5SRH9 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC23.36■■□□□ 1.33
TTC39AQ5SRH9 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC23.36■■□□□ 1.33
TTC39AQ5SRH9 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
TTC39AQ5SRH9 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC23.36■■□□□ 1.33
TTC39AQ5SRH9 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC23.36■■□□□ 1.33
TTC39AQ5SRH9 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC23.36■■□□□ 1.33
TTC39AQ5SRH9 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC23.35■■□□□ 1.33
TTC39AQ5SRH9 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
TTC39AQ5SRH9 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
TTC39AQ5SRH9 EGLN1P1-201ENST00000531623 762 ntBASIC23.35■■□□□ 1.33
TTC39AQ5SRH9 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
TTC39AQ5SRH9 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC23.35■■□□□ 1.33
TTC39AQ5SRH9 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC23.35■■□□□ 1.33
TTC39AQ5SRH9 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
TTC39AQ5SRH9 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
TTC39AQ5SRH9 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
TTC39AQ5SRH9 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC23.35■■□□□ 1.33
TTC39AQ5SRH9 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC23.35■■□□□ 1.33
TTC39AQ5SRH9 KRT18P22-201ENST00000402024 1347 ntBASIC23.34■■□□□ 1.33
TTC39AQ5SRH9 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC23.34■■□□□ 1.33
TTC39AQ5SRH9 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC23.34■■□□□ 1.33
TTC39AQ5SRH9 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
TTC39AQ5SRH9 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC23.34■■□□□ 1.33
TTC39AQ5SRH9 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC23.34■■□□□ 1.33
TTC39AQ5SRH9 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC23.34■■□□□ 1.33
TTC39AQ5SRH9 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
TTC39AQ5SRH9 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC23.34■■□□□ 1.33
TTC39AQ5SRH9 TSPY21P-201ENST00000433481 731 ntBASIC23.34■■□□□ 1.33
TTC39AQ5SRH9 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC23.34■■□□□ 1.33
TTC39AQ5SRH9 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC23.34■■□□□ 1.33
TTC39AQ5SRH9 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC23.34■■□□□ 1.33
TTC39AQ5SRH9 DUT-205ENST00000558813 769 ntTSL 2 BASIC23.34■■□□□ 1.33
TTC39AQ5SRH9 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC23.34■■□□□ 1.33
TTC39AQ5SRH9 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
TTC39AQ5SRH9 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC23.34■■□□□ 1.33
TTC39AQ5SRH9 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
TTC39AQ5SRH9 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
TTC39AQ5SRH9 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC23.34■■□□□ 1.33
TTC39AQ5SRH9 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
TTC39AQ5SRH9 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC23.33■■□□□ 1.33
TTC39AQ5SRH9 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC23.33■■□□□ 1.33
TTC39AQ5SRH9 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.33
TTC39AQ5SRH9 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
TTC39AQ5SRH9 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
TTC39AQ5SRH9 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC23.33■■□□□ 1.33
TTC39AQ5SRH9 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC23.33■■□□□ 1.33
TTC39AQ5SRH9 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
TTC39AQ5SRH9 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC23.33■■□□□ 1.33
TTC39AQ5SRH9 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC23.33■■□□□ 1.33
TTC39AQ5SRH9 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC23.33■■□□□ 1.33
TTC39AQ5SRH9 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC23.33■■□□□ 1.33
TTC39AQ5SRH9 INGX-201ENST00000359239 846 ntBASIC23.33■■□□□ 1.33
TTC39AQ5SRH9 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.33
TTC39AQ5SRH9 TMA16-209ENST00000513272 803 ntTSL 2 BASIC23.33■■□□□ 1.33
TTC39AQ5SRH9 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC23.33■■□□□ 1.33
TTC39AQ5SRH9 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC23.33■■□□□ 1.33
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms