Protein–RNA interactions for Protein: P52788

SMS, Spermine synthase, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMSP52788 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC17.97■□□□□ 0.47
SMSP52788 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC17.97■□□□□ 0.47
SMSP52788 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC17.97■□□□□ 0.47
SMSP52788 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
SMSP52788 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SMSP52788 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SMSP52788 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC17.97■□□□□ 0.47
SMSP52788 MOK-233ENST00000524214 1539 ntTSL 2 BASIC17.97■□□□□ 0.47
SMSP52788 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
SMSP52788 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
SMSP52788 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
SMSP52788 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC17.96■□□□□ 0.47
SMSP52788 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SMSP52788 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC17.96■□□□□ 0.47
SMSP52788 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SMSP52788 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SMSP52788 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
SMSP52788 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC17.96■□□□□ 0.47
SMSP52788 AL032819.2-201ENST00000624543 2162 ntBASIC17.96■□□□□ 0.47
SMSP52788 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SMSP52788 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SMSP52788 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SMSP52788 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
SMSP52788 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
SMSP52788 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC17.96■□□□□ 0.47
SMSP52788 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC17.96■□□□□ 0.47
SMSP52788 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC17.96■□□□□ 0.47
SMSP52788 AL355355.2-201ENST00000442321 338 ntBASIC17.96■□□□□ 0.47
SMSP52788 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SMSP52788 AL355075.4-201ENST00000554988 638 ntBASIC17.96■□□□□ 0.47
SMSP52788 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SMSP52788 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC17.96■□□□□ 0.47
SMSP52788 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
SMSP52788 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC17.96■□□□□ 0.47
SMSP52788 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
SMSP52788 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SMSP52788 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC17.96■□□□□ 0.47
SMSP52788 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
SMSP52788 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.46
SMSP52788 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC17.96■□□□□ 0.46
SMSP52788 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC17.96■□□□□ 0.46
SMSP52788 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SMSP52788 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
SMSP52788 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SMSP52788 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SMSP52788 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
SMSP52788 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SMSP52788 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
SMSP52788 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SMSP52788 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
SMSP52788 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC17.95■□□□□ 0.46
SMSP52788 AL353807.1-201ENST00000427475 662 ntBASIC17.95■□□□□ 0.46
SMSP52788 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC17.95■□□□□ 0.46
SMSP52788 MAX-217ENST00000557277 728 ntTSL 3 BASIC17.95■□□□□ 0.46
SMSP52788 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC17.95■□□□□ 0.46
SMSP52788 AL031963.3-201ENST00000606441 850 ntBASIC17.95■□□□□ 0.46
SMSP52788 AC026471.5-201ENST00000615068 467 ntBASIC17.95■□□□□ 0.46
SMSP52788 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC17.95■□□□□ 0.46
SMSP52788 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC17.95■□□□□ 0.46
SMSP52788 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
SMSP52788 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
SMSP52788 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SMSP52788 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SMSP52788 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC17.95■□□□□ 0.46
SMSP52788 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
SMSP52788 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SMSP52788 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SMSP52788 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
SMSP52788 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SMSP52788 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC17.94■□□□□ 0.46
SMSP52788 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SMSP52788 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
SMSP52788 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SMSP52788 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SMSP52788 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
SMSP52788 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SMSP52788 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
SMSP52788 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SMSP52788 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
SMSP52788 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC17.94■□□□□ 0.46
SMSP52788 PPOX-219ENST00000544598 813 ntTSL 2 BASIC17.94■□□□□ 0.46
SMSP52788 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
SMSP52788 KRT8P20-201ENST00000423953 1409 ntBASIC17.94■□□□□ 0.46
SMSP52788 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
SMSP52788 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC17.94■□□□□ 0.46
SMSP52788 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SMSP52788 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SMSP52788 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SMSP52788 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SMSP52788 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC17.93■□□□□ 0.46
SMSP52788 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SMSP52788 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC17.93■□□□□ 0.46
SMSP52788 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
SMSP52788 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC17.93■□□□□ 0.46
SMSP52788 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SMSP52788 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SMSP52788 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SMSP52788 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SMSP52788 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC17.93■□□□□ 0.46
SMSP52788 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms