Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC18.23■□□□□ 0.51
RORAP35398 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RORAP35398 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC18.23■□□□□ 0.51
RORAP35398 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC18.23■□□□□ 0.51
RORAP35398 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
RORAP35398 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RORAP35398 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
RORAP35398 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
RORAP35398 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
RORAP35398 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
RORAP35398 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC18.23■□□□□ 0.51
RORAP35398 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
RORAP35398 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC18.23■□□□□ 0.51
RORAP35398 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC18.23■□□□□ 0.51
RORAP35398 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC18.23■□□□□ 0.51
RORAP35398 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
RORAP35398 AC116562.4-202ENST00000641738 218 ntBASIC18.23■□□□□ 0.51
RORAP35398 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC18.23■□□□□ 0.51
RORAP35398 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
RORAP35398 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
RORAP35398 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
RORAP35398 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RORAP35398 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC18.23■□□□□ 0.51
RORAP35398 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC18.23■□□□□ 0.51
RORAP35398 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC18.23■□□□□ 0.51
RORAP35398 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RORAP35398 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC18.22■□□□□ 0.51
RORAP35398 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC18.22■□□□□ 0.51
RORAP35398 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC18.22■□□□□ 0.51
RORAP35398 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC18.22■□□□□ 0.51
RORAP35398 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
RORAP35398 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RORAP35398 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RORAP35398 ADM-207ENST00000530439 1839 ntTSL 2 BASIC18.22■□□□□ 0.51
RORAP35398 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC18.22■□□□□ 0.51
RORAP35398 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC18.22■□□□□ 0.51
RORAP35398 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC18.22■□□□□ 0.51
RORAP35398 KRT18P35-201ENST00000510488 1269 ntBASIC18.22■□□□□ 0.51
RORAP35398 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC18.22■□□□□ 0.51
RORAP35398 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
RORAP35398 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC18.22■□□□□ 0.51
RORAP35398 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC18.22■□□□□ 0.51
RORAP35398 AL590326.2-201ENST00000625139 305 ntBASIC18.22■□□□□ 0.51
RORAP35398 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
RORAP35398 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
RORAP35398 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
RORAP35398 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
RORAP35398 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
RORAP35398 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RORAP35398 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC18.22■□□□□ 0.51
RORAP35398 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RORAP35398 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
RORAP35398 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC18.22■□□□□ 0.51
RORAP35398 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC18.22■□□□□ 0.51
RORAP35398 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC18.22■□□□□ 0.51
RORAP35398 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
RORAP35398 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
RORAP35398 LGALS8-AS1-201ENST00000487567 1457 ntBASIC18.21■□□□□ 0.51
RORAP35398 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC18.21■□□□□ 0.51
RORAP35398 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
RORAP35398 ANKRD18DP-204ENST00000455355 1975 ntBASIC18.21■□□□□ 0.51
RORAP35398 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RORAP35398 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
RORAP35398 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC18.21■□□□□ 0.51
RORAP35398 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RORAP35398 LIN28AP1-201ENST00000429574 405 ntBASIC18.21■□□□□ 0.51
RORAP35398 CCR12P-201ENST00000446203 998 ntBASIC18.21■□□□□ 0.51
RORAP35398 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC18.21■□□□□ 0.51
RORAP35398 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
RORAP35398 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
RORAP35398 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RORAP35398 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
RORAP35398 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC18.21■□□□□ 0.51
RORAP35398 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC18.21■□□□□ 0.5
RORAP35398 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC18.2■□□□□ 0.5
RORAP35398 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RORAP35398 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
RORAP35398 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
RORAP35398 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RORAP35398 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC18.2■□□□□ 0.5
RORAP35398 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RORAP35398 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
RORAP35398 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
RORAP35398 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RORAP35398 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC18.2■□□□□ 0.5
RORAP35398 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RORAP35398 HMGA1P5-201ENST00000412453 271 ntBASIC18.2■□□□□ 0.5
RORAP35398 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC18.2■□□□□ 0.5
RORAP35398 AC104076.2-201ENST00000448912 469 ntBASIC18.2■□□□□ 0.5
RORAP35398 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RORAP35398 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RORAP35398 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RORAP35398 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC18.2■□□□□ 0.5
RORAP35398 AL023803.3-201ENST00000615559 522 ntBASIC18.2■□□□□ 0.5
RORAP35398 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC18.2■□□□□ 0.5
RORAP35398 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
RORAP35398 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
RORAP35398 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
RORAP35398 AC092338.2-201ENST00000568827 1415 ntBASIC18.2■□□□□ 0.5
RORAP35398 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC18.2■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms