Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CD28P10747 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC15.01□□□□□ -0.01
CD28P10747 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CD28P10747 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
CD28P10747 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC15□□□□□ -0.01
CD28P10747 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC15□□□□□ -0.01
CD28P10747 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC15□□□□□ -0.01
CD28P10747 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
CD28P10747 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
CD28P10747 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
CD28P10747 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
CD28P10747 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CD28P10747 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CD28P10747 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC15□□□□□ -0.01
CD28P10747 AC117947.1-201ENST00000427448 529 ntBASIC15□□□□□ -0.01
CD28P10747 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC15□□□□□ -0.01
CD28P10747 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC15□□□□□ -0.01
CD28P10747 AC139887.4-201ENST00000607877 719 ntBASIC15□□□□□ -0.01
CD28P10747 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC15□□□□□ -0.01
CD28P10747 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC15□□□□□ -0.01
CD28P10747 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC15□□□□□ -0.01
CD28P10747 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CD28P10747 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC15□□□□□ -0.01
CD28P10747 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CD28P10747 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
CD28P10747 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CD28P10747 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CD28P10747 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CD28P10747 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC14.99□□□□□ -0.01
CD28P10747 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CD28P10747 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CD28P10747 AC009237.14-201ENST00000609975 1594 ntBASIC14.99□□□□□ -0.01
CD28P10747 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC14.99□□□□□ -0.01
CD28P10747 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC14.99□□□□□ -0.01
CD28P10747 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CD28P10747 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
CD28P10747 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
CD28P10747 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC14.99□□□□□ -0.01
CD28P10747 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CD28P10747 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC14.99□□□□□ -0.01
CD28P10747 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CD28P10747 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC14.99□□□□□ -0.01
CD28P10747 TSPY17P-201ENST00000450329 467 ntBASIC14.99□□□□□ -0.01
CD28P10747 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC14.99□□□□□ -0.01
CD28P10747 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC14.99□□□□□ -0.01
CD28P10747 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC14.99□□□□□ -0.01
CD28P10747 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC14.99□□□□□ -0.01
CD28P10747 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC14.99□□□□□ -0.01
CD28P10747 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC14.99□□□□□ -0.01
CD28P10747 AC010653.2-201ENST00000623505 997 ntBASIC14.99□□□□□ -0.01
CD28P10747 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CD28P10747 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CD28P10747 LINC01521-201ENST00000504184 1943 ntBASIC14.99□□□□□ -0.01
CD28P10747 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CD28P10747 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CD28P10747 AC092338.2-201ENST00000568827 1415 ntBASIC14.99□□□□□ -0.01
CD28P10747 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC14.99□□□□□ -0.01
CD28P10747 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
CD28P10747 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC14.98□□□□□ -0.01
CD28P10747 AC092667.1-201ENST00000434301 2586 ntBASIC14.98□□□□□ -0.01
CD28P10747 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
CD28P10747 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC14.98□□□□□ -0.01
CD28P10747 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CD28P10747 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC14.98□□□□□ -0.01
CD28P10747 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CD28P10747 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CD28P10747 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CD28P10747 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC14.98□□□□□ -0.01
CD28P10747 CD70-202ENST00000423145 881 ntTSL 2 BASIC14.98□□□□□ -0.01
CD28P10747 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CD28P10747 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC14.98□□□□□ -0.01
CD28P10747 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CD28P10747 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
CD28P10747 GLRB-205ENST00000512619 728 ntTSL 3 BASIC14.98□□□□□ -0.01
CD28P10747 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC14.98□□□□□ -0.01
CD28P10747 AC022616.7-201ENST00000525383 220 ntBASIC14.98□□□□□ -0.01
CD28P10747 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC14.98□□□□□ -0.01
CD28P10747 AL023803.3-201ENST00000615559 522 ntBASIC14.98□□□□□ -0.01
CD28P10747 AL138966.2-201ENST00000621997 464 ntBASIC14.98□□□□□ -0.01
CD28P10747 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC14.98□□□□□ -0.01
CD28P10747 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CD28P10747 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
CD28P10747 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CD28P10747 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CD28P10747 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC14.98□□□□□ -0.01
CD28P10747 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CD28P10747 AL162377.1-201ENST00000618844 1793 ntBASIC14.98□□□□□ -0.01
CD28P10747 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC14.98□□□□□ -0.01
CD28P10747 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
CD28P10747 KRT8P41-201ENST00000533985 1514 ntBASIC14.97□□□□□ -0.01
CD28P10747 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
CD28P10747 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CD28P10747 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CD28P10747 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CD28P10747 GUK1-204ENST00000366721 689 ntTSL 3 BASIC14.97□□□□□ -0.01
CD28P10747 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC14.97□□□□□ -0.01
CD28P10747 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC14.97□□□□□ -0.01
CD28P10747 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CD28P10747 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC14.97□□□□□ -0.01
CD28P10747 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms