Protein–RNA interactions for Protein: A0A075B5Z7

Trav5-1, T cell receptor alpha variable 5-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-1A0A075B5Z7 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Trav5-1A0A075B5Z7 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC14.06□□□□□ -0.16
Trav5-1A0A075B5Z7 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC14.06□□□□□ -0.16
Trav5-1A0A075B5Z7 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC14.06□□□□□ -0.16
Trav5-1A0A075B5Z7 Gm17971-201ENSMUST00000190239 806 ntBASIC14.06□□□□□ -0.16
Trav5-1A0A075B5Z7 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trav5-1A0A075B5Z7 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav5-1A0A075B5Z7 AC108846.1-201ENSMUST00000214531 513 ntBASIC14.06□□□□□ -0.16
Trav5-1A0A075B5Z7 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC14.06□□□□□ -0.16
Trav5-1A0A075B5Z7 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav5-1A0A075B5Z7 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav5-1A0A075B5Z7 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav5-1A0A075B5Z7 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
Trav5-1A0A075B5Z7 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav5-1A0A075B5Z7 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav5-1A0A075B5Z7 Gm32996-201ENSMUST00000199828 1447 ntBASIC14.06□□□□□ -0.16
Trav5-1A0A075B5Z7 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trav5-1A0A075B5Z7 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav5-1A0A075B5Z7 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trav5-1A0A075B5Z7 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Trav5-1A0A075B5Z7 Gm8839-201ENSMUST00000121279 1645 ntBASIC14.05□□□□□ -0.16
Trav5-1A0A075B5Z7 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav5-1A0A075B5Z7 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav5-1A0A075B5Z7 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav5-1A0A075B5Z7 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC14.05□□□□□ -0.16
Trav5-1A0A075B5Z7 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC14.05□□□□□ -0.16
Trav5-1A0A075B5Z7 Gm12895-201ENSMUST00000122214 226 ntBASIC14.05□□□□□ -0.16
Trav5-1A0A075B5Z7 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC14.05□□□□□ -0.16
Trav5-1A0A075B5Z7 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC14.05□□□□□ -0.16
Trav5-1A0A075B5Z7 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC14.05□□□□□ -0.16
Trav5-1A0A075B5Z7 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav5-1A0A075B5Z7 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Trav5-1A0A075B5Z7 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav5-1A0A075B5Z7 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav5-1A0A075B5Z7 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav5-1A0A075B5Z7 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC14.05□□□□□ -0.16
Trav5-1A0A075B5Z7 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Trav5-1A0A075B5Z7 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC14.05□□□□□ -0.16
Trav5-1A0A075B5Z7 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC14.05□□□□□ -0.16
Trav5-1A0A075B5Z7 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav5-1A0A075B5Z7 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trav5-1A0A075B5Z7 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Trav5-1A0A075B5Z7 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Trav5-1A0A075B5Z7 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav5-1A0A075B5Z7 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav5-1A0A075B5Z7 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav5-1A0A075B5Z7 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav5-1A0A075B5Z7 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav5-1A0A075B5Z7 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav5-1A0A075B5Z7 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trav5-1A0A075B5Z7 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC14.04□□□□□ -0.16
Trav5-1A0A075B5Z7 Gm7153-201ENSMUST00000117092 455 ntBASIC14.04□□□□□ -0.16
Trav5-1A0A075B5Z7 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trav5-1A0A075B5Z7 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav5-1A0A075B5Z7 Spr-ps1-201ENSMUST00000089584 605 ntBASIC14.04□□□□□ -0.16
Trav5-1A0A075B5Z7 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav5-1A0A075B5Z7 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
Trav5-1A0A075B5Z7 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trav5-1A0A075B5Z7 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav5-1A0A075B5Z7 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav5-1A0A075B5Z7 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trav5-1A0A075B5Z7 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav5-1A0A075B5Z7 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav5-1A0A075B5Z7 Slc35b2-202ENSMUST00000223987 1766 ntBASIC14.04□□□□□ -0.16
Trav5-1A0A075B5Z7 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trav5-1A0A075B5Z7 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav5-1A0A075B5Z7 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav5-1A0A075B5Z7 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav5-1A0A075B5Z7 Gm43294-201ENSMUST00000202850 2490 ntBASIC14.03□□□□□ -0.16
Trav5-1A0A075B5Z7 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trav5-1A0A075B5Z7 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC14.03□□□□□ -0.16
Trav5-1A0A075B5Z7 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav5-1A0A075B5Z7 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Trav5-1A0A075B5Z7 Gm44454-201ENSMUST00000198541 138 ntBASIC14.03□□□□□ -0.16
Trav5-1A0A075B5Z7 CT009713.7-201ENSMUST00000224689 571 ntBASIC14.03□□□□□ -0.16
Trav5-1A0A075B5Z7 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav5-1A0A075B5Z7 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trav5-1A0A075B5Z7 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC14.03□□□□□ -0.16
Trav5-1A0A075B5Z7 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Trav5-1A0A075B5Z7 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav5-1A0A075B5Z7 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Trav5-1A0A075B5Z7 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav5-1A0A075B5Z7 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav5-1A0A075B5Z7 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav5-1A0A075B5Z7 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav5-1A0A075B5Z7 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav5-1A0A075B5Z7 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav5-1A0A075B5Z7 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav5-1A0A075B5Z7 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Trav5-1A0A075B5Z7 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav5-1A0A075B5Z7 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav5-1A0A075B5Z7 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav5-1A0A075B5Z7 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC14.02□□□□□ -0.16
Trav5-1A0A075B5Z7 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
Trav5-1A0A075B5Z7 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Trav5-1A0A075B5Z7 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Trav5-1A0A075B5Z7 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav5-1A0A075B5Z7 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav5-1A0A075B5Z7 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav5-1A0A075B5Z7 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms