Protein–RNA interactions for Protein: Q9Y5H0

PCDHGA3, Protocadherin gamma-A3, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3Q9Y5H0 SMILR-201ENST00000533992 553 ntTSL 4 BASIC4.63□□□□□ -1.67
PCDHGA3Q9Y5H0 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC4.63□□□□□ -1.67
PCDHGA3Q9Y5H0 AC005868.1-201ENST00000536421 331 ntBASIC4.63□□□□□ -1.67
PCDHGA3Q9Y5H0 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
PCDHGA3Q9Y5H0 MIR3118-1-201ENST00000581787 76 ntBASIC4.63□□□□□ -1.67
PCDHGA3Q9Y5H0 SNORD84-203ENST00000584275 78 ntBASIC4.63□□□□□ -1.67
PCDHGA3Q9Y5H0 AC091953.2-201ENST00000623979 160 ntBASIC4.63□□□□□ -1.67
PCDHGA3Q9Y5H0 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC4.63□□□□□ -1.67
PCDHGA3Q9Y5H0 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC4.63□□□□□ -1.67
PCDHGA3Q9Y5H0 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
PCDHGA3Q9Y5H0 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC4.63□□□□□ -1.67
PCDHGA3Q9Y5H0 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC4.63□□□□□ -1.67
PCDHGA3Q9Y5H0 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
PCDHGA3Q9Y5H0 AL138713.1-201ENST00000624026 2130 ntBASIC4.63□□□□□ -1.67
PCDHGA3Q9Y5H0 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC4.63□□□□□ -1.67
PCDHGA3Q9Y5H0 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.62□□□□□ -1.67
PCDHGA3Q9Y5H0 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
PCDHGA3Q9Y5H0 AC074029.4-201ENST00000624796 1859 ntBASIC4.62□□□□□ -1.67
PCDHGA3Q9Y5H0 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
PCDHGA3Q9Y5H0 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
PCDHGA3Q9Y5H0 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC4.62□□□□□ -1.67
PCDHGA3Q9Y5H0 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC4.62□□□□□ -1.67
PCDHGA3Q9Y5H0 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
PCDHGA3Q9Y5H0 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC4.62□□□□□ -1.67
PCDHGA3Q9Y5H0 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
PCDHGA3Q9Y5H0 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.62□□□□□ -1.67
PCDHGA3Q9Y5H0 OR4G2P-201ENST00000328113 903 ntBASIC4.62□□□□□ -1.67
PCDHGA3Q9Y5H0 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
PCDHGA3Q9Y5H0 RNU6-223P-201ENST00000362830 107 ntBASIC4.62□□□□□ -1.67
PCDHGA3Q9Y5H0 RNU5A-8P-201ENST00000364102 114 ntBASIC4.62□□□□□ -1.67
PCDHGA3Q9Y5H0 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC4.62□□□□□ -1.67
PCDHGA3Q9Y5H0 U3.30-201ENST00000391308 210 ntBASIC4.62□□□□□ -1.67
PCDHGA3Q9Y5H0 RPS3AP36-201ENST00000398190 775 ntBASIC4.62□□□□□ -1.67
PCDHGA3Q9Y5H0 RNA5SP345-201ENST00000410646 108 ntBASIC4.62□□□□□ -1.67
PCDHGA3Q9Y5H0 RPS7P15-201ENST00000415804 584 ntBASIC4.62□□□□□ -1.67
PCDHGA3Q9Y5H0 AC099677.1-201ENST00000420575 175 ntBASIC4.62□□□□□ -1.67
PCDHGA3Q9Y5H0 AC133104.1-201ENST00000429100 218 ntBASIC4.62□□□□□ -1.67
PCDHGA3Q9Y5H0 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC4.62□□□□□ -1.67
PCDHGA3Q9Y5H0 RAC1P7-201ENST00000445367 377 ntBASIC4.62□□□□□ -1.67
PCDHGA3Q9Y5H0 RPS17P13-201ENST00000448974 407 ntBASIC4.62□□□□□ -1.67
PCDHGA3Q9Y5H0 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC4.62□□□□□ -1.67
PCDHGA3Q9Y5H0 RNU7-59P-201ENST00000459101 61 ntBASIC4.62□□□□□ -1.67
PCDHGA3Q9Y5H0 SNORD108-201ENST00000459332 71 ntBASIC4.62□□□□□ -1.67
PCDHGA3Q9Y5H0 AC108751.2-201ENST00000469993 231 ntBASIC4.62□□□□□ -1.67
PCDHGA3Q9Y5H0 RPL12P20-201ENST00000475538 479 ntBASIC4.62□□□□□ -1.67
PCDHGA3Q9Y5H0 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC4.62□□□□□ -1.67
PCDHGA3Q9Y5H0 AC010587.1-201ENST00000505809 469 ntBASIC4.62□□□□□ -1.67
PCDHGA3Q9Y5H0 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC4.62□□□□□ -1.67
PCDHGA3Q9Y5H0 IGKV1OR2-1-201ENST00000514060 354 ntBASIC4.62□□□□□ -1.67
PCDHGA3Q9Y5H0 RNU6-1095P-201ENST00000516148 108 ntBASIC4.62□□□□□ -1.67
PCDHGA3Q9Y5H0 RNU6-314P-201ENST00000516574 104 ntBASIC4.62□□□□□ -1.67
PCDHGA3Q9Y5H0 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC4.62□□□□□ -1.67
PCDHGA3Q9Y5H0 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC4.62□□□□□ -1.67
PCDHGA3Q9Y5H0 AC009643.1-201ENST00000532030 391 ntBASIC4.62□□□□□ -1.67
PCDHGA3Q9Y5H0 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC4.62□□□□□ -1.67
PCDHGA3Q9Y5H0 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC4.62□□□□□ -1.67
PCDHGA3Q9Y5H0 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC4.62□□□□□ -1.67
PCDHGA3Q9Y5H0 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
PCDHGA3Q9Y5H0 AL845331.3-202ENST00000562856 261 ntBASIC4.62□□□□□ -1.67
PCDHGA3Q9Y5H0 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC4.62□□□□□ -1.67
PCDHGA3Q9Y5H0 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC4.62□□□□□ -1.67
PCDHGA3Q9Y5H0 IGKV1OR2-118-201ENST00000603238 347 ntBASIC4.62□□□□□ -1.67
PCDHGA3Q9Y5H0 FAM27B-201ENST00000610601 213 ntBASIC4.62□□□□□ -1.67
PCDHGA3Q9Y5H0 AC024941.1-201ENST00000612250 334 ntBASIC4.62□□□□□ -1.67
PCDHGA3Q9Y5H0 CR381653.2-201ENST00000624041 768 ntBASIC4.62□□□□□ -1.67
PCDHGA3Q9Y5H0 AL159972.1-201ENST00000625150 448 ntBASIC4.62□□□□□ -1.67
PCDHGA3Q9Y5H0 OR5H6-203ENST00000642105 978 ntBASIC4.62□□□□□ -1.67
PCDHGA3Q9Y5H0 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
PCDHGA3Q9Y5H0 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
PCDHGA3Q9Y5H0 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC4.62□□□□□ -1.67
PCDHGA3Q9Y5H0 AC010928.1-201ENST00000592477 1447 ntBASIC4.62□□□□□ -1.67
PCDHGA3Q9Y5H0 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.62□□□□□ -1.67
PCDHGA3Q9Y5H0 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.62□□□□□ -1.67
PCDHGA3Q9Y5H0 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
PCDHGA3Q9Y5H0 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
PCDHGA3Q9Y5H0 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
PCDHGA3Q9Y5H0 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC4.61□□□□□ -1.67
PCDHGA3Q9Y5H0 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
PCDHGA3Q9Y5H0 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.61□□□□□ -1.67
PCDHGA3Q9Y5H0 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
PCDHGA3Q9Y5H0 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC4.61□□□□□ -1.67
PCDHGA3Q9Y5H0 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC4.61□□□□□ -1.67
PCDHGA3Q9Y5H0 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
PCDHGA3Q9Y5H0 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC4.61□□□□□ -1.67
PCDHGA3Q9Y5H0 AC068538.1-201ENST00000376856 336 ntBASIC4.61□□□□□ -1.67
PCDHGA3Q9Y5H0 RNU6-1103P-201ENST00000384150 107 ntBASIC4.61□□□□□ -1.67
PCDHGA3Q9Y5H0 RNU11-4P-201ENST00000391149 133 ntBASIC4.61□□□□□ -1.67
PCDHGA3Q9Y5H0 RPA3-203ENST00000401447 414 ntTSL 3 BASIC4.61□□□□□ -1.67
PCDHGA3Q9Y5H0 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC4.61□□□□□ -1.67
PCDHGA3Q9Y5H0 CCNG1P1-201ENST00000406783 885 ntBASIC4.61□□□□□ -1.67
PCDHGA3Q9Y5H0 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC4.61□□□□□ -1.67
PCDHGA3Q9Y5H0 RN7SKP106-201ENST00000410832 272 ntBASIC4.61□□□□□ -1.67
PCDHGA3Q9Y5H0 RNU6-516P-201ENST00000411381 104 ntBASIC4.61□□□□□ -1.67
PCDHGA3Q9Y5H0 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC4.61□□□□□ -1.67
PCDHGA3Q9Y5H0 TBCAP2-201ENST00000416175 326 ntBASIC4.61□□□□□ -1.67
PCDHGA3Q9Y5H0 MTND3P17-201ENST00000416968 344 ntBASIC4.61□□□□□ -1.67
PCDHGA3Q9Y5H0 OR1AA1P-201ENST00000419597 916 ntBASIC4.61□□□□□ -1.67
PCDHGA3Q9Y5H0 USP9YP36-201ENST00000424581 829 ntBASIC4.61□□□□□ -1.67
PCDHGA3Q9Y5H0 FCF1P1-201ENST00000432690 571 ntBASIC4.61□□□□□ -1.67
PCDHGA3Q9Y5H0 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC4.61□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 83.8 ms