Protein–RNA interactions for Protein: Q9Y5G9

PCDHGA4, Protocadherin gamma-A4, humanhuman

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA4Q9Y5G9 AC007365.2-201ENST00000428806 458 ntBASIC6.66□□□□□ -1.34
PCDHGA4Q9Y5G9 AL591178.2-201ENST00000429191 461 ntTSL 3 BASIC6.66□□□□□ -1.34
PCDHGA4Q9Y5G9 OR1M1-201ENST00000429566 1035 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
PCDHGA4Q9Y5G9 MYL6P3-201ENST00000436904 432 ntBASIC6.66□□□□□ -1.34
PCDHGA4Q9Y5G9 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC6.66□□□□□ -1.34
PCDHGA4Q9Y5G9 LRTOMT-209ENST00000440313 253 ntTSL 3 BASIC6.66□□□□□ -1.34
PCDHGA4Q9Y5G9 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC6.66□□□□□ -1.34
PCDHGA4Q9Y5G9 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC6.66□□□□□ -1.34
PCDHGA4Q9Y5G9 snoU13.7-201ENST00000459220 104 ntBASIC6.66□□□□□ -1.34
PCDHGA4Q9Y5G9 AC010683.1-201ENST00000473673 378 ntBASIC6.66□□□□□ -1.34
PCDHGA4Q9Y5G9 AC074255.1-201ENST00000511259 501 ntBASIC6.66□□□□□ -1.34
PCDHGA4Q9Y5G9 Y_RNA.686-201ENST00000516548 134 ntBASIC6.66□□□□□ -1.34
PCDHGA4Q9Y5G9 AP002001.1-203ENST00000534002 267 ntBASIC6.66□□□□□ -1.34
PCDHGA4Q9Y5G9 AC007537.1-201ENST00000539347 327 ntBASIC6.66□□□□□ -1.34
PCDHGA4Q9Y5G9 LINC02400-201ENST00000548210 351 ntTSL 2 BASIC6.66□□□□□ -1.34
PCDHGA4Q9Y5G9 AC015908.3-202ENST00000579367 457 ntTSL 2 BASIC6.66□□□□□ -1.34
PCDHGA4Q9Y5G9 Metazoa_SRP.77-201ENST00000616915 252 ntBASIC6.66□□□□□ -1.34
PCDHGA4Q9Y5G9 AP005212.3-201ENST00000619964 528 ntBASIC6.66□□□□□ -1.34
PCDHGA4Q9Y5G9 MED12L-206ENST00000474524 10744 ntAPPRIS P2 TSL 1 (best) BASIC6.66□□□□□ -1.34
PCDHGA4Q9Y5G9 SEMA3A-204ENST00000436949 2550 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
PCDHGA4Q9Y5G9 SLMAP-202ENST00000295952 4420 ntAPPRIS P1 TSL 2 BASIC6.66□□□□□ -1.34
PCDHGA4Q9Y5G9 DICER1-202ENST00000393063 10220 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
PCDHGA4Q9Y5G9 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC6.66□□□□□ -1.34
PCDHGA4Q9Y5G9 ZHX3-205ENST00000432768 3551 ntAPPRIS P1 TSL 2 BASIC6.66□□□□□ -1.34
PCDHGA4Q9Y5G9 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC6.66□□□□□ -1.34
PCDHGA4Q9Y5G9 DOCK11-201ENST00000276202 6625 ntAPPRIS P2 TSL 1 (best) BASIC6.66□□□□□ -1.34
PCDHGA4Q9Y5G9 TMCO5A-205ENST00000559502 1939 ntAPPRIS ALT2 TSL 2 BASIC6.66□□□□□ -1.34
PCDHGA4Q9Y5G9 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
PCDHGA4Q9Y5G9 AC007993.1-201ENST00000621298 2430 ntBASIC6.66□□□□□ -1.34
PCDHGA4Q9Y5G9 AC140134.1-201ENST00000511830 3544 ntBASIC6.66□□□□□ -1.34
PCDHGA4Q9Y5G9 RAD17P1-201ENST00000418130 2042 ntBASIC6.66□□□□□ -1.34
PCDHGA4Q9Y5G9 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
PCDHGA4Q9Y5G9 SERPINB7-206ENST00000540675 2193 ntTSL 2 BASIC6.65□□□□□ -1.34
PCDHGA4Q9Y5G9 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
PCDHGA4Q9Y5G9 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC6.65□□□□□ -1.34
PCDHGA4Q9Y5G9 AC105105.2-201ENST00000590797 4521 ntTSL 2 BASIC6.65□□□□□ -1.34
PCDHGA4Q9Y5G9 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC6.65□□□□□ -1.34
PCDHGA4Q9Y5G9 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
PCDHGA4Q9Y5G9 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC6.65□□□□□ -1.34
PCDHGA4Q9Y5G9 TMEM135-201ENST00000305494 2433 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
PCDHGA4Q9Y5G9 RNU6-1301P-201ENST00000362724 104 ntBASIC6.65□□□□□ -1.34
PCDHGA4Q9Y5G9 RNA5SP391-201ENST00000363456 119 ntBASIC6.65□□□□□ -1.34
PCDHGA4Q9Y5G9 Y_RNA.357-201ENST00000365487 109 ntBASIC6.65□□□□□ -1.34
PCDHGA4Q9Y5G9 AC026310.1-201ENST00000396004 378 ntBASIC6.65□□□□□ -1.34
PCDHGA4Q9Y5G9 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC6.65□□□□□ -1.34
PCDHGA4Q9Y5G9 RNU4-30P-201ENST00000410245 143 ntBASIC6.65□□□□□ -1.34
PCDHGA4Q9Y5G9 RNA5SP155-201ENST00000411154 129 ntBASIC6.65□□□□□ -1.34
PCDHGA4Q9Y5G9 RPS15AP40-201ENST00000419621 391 ntBASIC6.65□□□□□ -1.34
PCDHGA4Q9Y5G9 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC6.65□□□□□ -1.34
PCDHGA4Q9Y5G9 AHCYP8-201ENST00000425108 209 ntBASIC6.65□□□□□ -1.34
PCDHGA4Q9Y5G9 E2F3-IT1-201ENST00000433182 400 ntTSL 3 BASIC6.65□□□□□ -1.34
PCDHGA4Q9Y5G9 RPL32-206ENST00000435983 620 ntAPPRIS P1 TSL 2 BASIC6.65□□□□□ -1.34
PCDHGA4Q9Y5G9 AC079354.2-201ENST00000453523 154 ntBASIC6.65□□□□□ -1.34
PCDHGA4Q9Y5G9 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC6.65□□□□□ -1.34
PCDHGA4Q9Y5G9 RN7SL70P-201ENST00000478322 302 ntBASIC6.65□□□□□ -1.34
PCDHGA4Q9Y5G9 AC005840.1-201ENST00000498412 377 ntBASIC6.65□□□□□ -1.34
PCDHGA4Q9Y5G9 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC6.65□□□□□ -1.34
PCDHGA4Q9Y5G9 AC002401.2-201ENST00000511361 430 ntTSL 3 BASIC6.65□□□□□ -1.34
PCDHGA4Q9Y5G9 RNU7-175P-201ENST00000515915 61 ntBASIC6.65□□□□□ -1.34
PCDHGA4Q9Y5G9 SNORA70.11-201ENST00000515987 138 ntBASIC6.65□□□□□ -1.34
PCDHGA4Q9Y5G9 SNORA70.13-201ENST00000516116 138 ntBASIC6.65□□□□□ -1.34
PCDHGA4Q9Y5G9 RNU4ATAC15P-201ENST00000516415 126 ntBASIC6.65□□□□□ -1.34
PCDHGA4Q9Y5G9 AP000859.1-201ENST00000525536 307 ntBASIC6.65□□□□□ -1.34
PCDHGA4Q9Y5G9 SNRPGP16-201ENST00000533275 226 ntBASIC6.65□□□□□ -1.34
PCDHGA4Q9Y5G9 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC6.65□□□□□ -1.34
PCDHGA4Q9Y5G9 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC6.65□□□□□ -1.34
PCDHGA4Q9Y5G9 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC6.65□□□□□ -1.34
PCDHGA4Q9Y5G9 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC6.65□□□□□ -1.34
PCDHGA4Q9Y5G9 AC067852.4-201ENST00000590314 478 ntBASIC6.65□□□□□ -1.34
PCDHGA4Q9Y5G9 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC6.65□□□□□ -1.34
PCDHGA4Q9Y5G9 LINC-ROR-201ENST00000553704 2603 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
PCDHGA4Q9Y5G9 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
PCDHGA4Q9Y5G9 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
PCDHGA4Q9Y5G9 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
PCDHGA4Q9Y5G9 JADE3-203ENST00000611250 4713 ntAPPRIS P1 TSL 2 BASIC6.65□□□□□ -1.35
PCDHGA4Q9Y5G9 ZNF519-207ENST00000590202 2830 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
PCDHGA4Q9Y5G9 NRXN1-248ENST00000636345 3595 ntTSL 5 BASIC6.65□□□□□ -1.35
PCDHGA4Q9Y5G9 KCNIP4-201ENST00000359001 2168 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
PCDHGA4Q9Y5G9 LINC01492-201ENST00000411575 3738 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
PCDHGA4Q9Y5G9 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
PCDHGA4Q9Y5G9 SP110-201ENST00000258381 2426 ntAPPRIS P4 TSL 2 BASIC6.65□□□□□ -1.35
PCDHGA4Q9Y5G9 ZNF532-201ENST00000336078 6696 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
PCDHGA4Q9Y5G9 LYSMD3-201ENST00000315948 4259 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
PCDHGA4Q9Y5G9 DNAH17-201ENST00000389840 13723 ntAPPRIS P5 TSL 5 BASIC6.64□□□□□ -1.35
PCDHGA4Q9Y5G9 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC6.64□□□□□ -1.35
PCDHGA4Q9Y5G9 CHORDC1-201ENST00000320585 2654 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
PCDHGA4Q9Y5G9 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
PCDHGA4Q9Y5G9 RPL7L1-201ENST00000304734 3769 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
PCDHGA4Q9Y5G9 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC6.64□□□□□ -1.35
PCDHGA4Q9Y5G9 GFPT1-202ENST00000361060 8632 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
PCDHGA4Q9Y5G9 AC009229.4-201ENST00000623854 1947 ntBASIC6.64□□□□□ -1.35
PCDHGA4Q9Y5G9 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC6.64□□□□□ -1.35
PCDHGA4Q9Y5G9 AC005332.9-201ENST00000620266 2921 ntBASIC6.64□□□□□ -1.35
PCDHGA4Q9Y5G9 CACNA1E-204ENST00000367567 14757 ntAPPRIS ALT2 TSL 5 BASIC6.64□□□□□ -1.35
PCDHGA4Q9Y5G9 NCOR1-205ENST00000395857 9501 ntTSL 5 BASIC6.64□□□□□ -1.35
PCDHGA4Q9Y5G9 ABCB11-201ENST00000263817 4775 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
PCDHGA4Q9Y5G9 AC068769.1-201ENST00000474767 2426 ntBASIC6.64□□□□□ -1.35
PCDHGA4Q9Y5G9 TRIM34-204ENST00000514226 2493 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
PCDHGA4Q9Y5G9 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
PCDHGA4Q9Y5G9 RPL12P13-201ENST00000310055 497 ntBASIC6.64□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 107.6 ms