Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
PCDHB1Q9Y5F3 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
PCDHB1Q9Y5F3 SDHCP2-201ENST00000398565 501 ntBASIC4.57□□□□□ -1.68
PCDHB1Q9Y5F3 RN7SKP235-201ENST00000410662 305 ntBASIC4.57□□□□□ -1.68
PCDHB1Q9Y5F3 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC4.57□□□□□ -1.68
PCDHB1Q9Y5F3 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.57□□□□□ -1.68
PCDHB1Q9Y5F3 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC4.57□□□□□ -1.68
PCDHB1Q9Y5F3 GAS5-208ENST00000425771 242 ntTSL 3 BASIC4.57□□□□□ -1.68
PCDHB1Q9Y5F3 AC122718.1-201ENST00000439448 744 ntBASIC4.57□□□□□ -1.68
PCDHB1Q9Y5F3 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC4.57□□□□□ -1.68
PCDHB1Q9Y5F3 AL353691.1-201ENST00000451332 387 ntBASIC4.57□□□□□ -1.68
PCDHB1Q9Y5F3 MTCO3P20-201ENST00000454926 688 ntBASIC4.57□□□□□ -1.68
PCDHB1Q9Y5F3 FAM133DP-201ENST00000464802 691 ntBASIC4.57□□□□□ -1.68
PCDHB1Q9Y5F3 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC4.57□□□□□ -1.68
PCDHB1Q9Y5F3 MTAPP1-201ENST00000489154 819 ntBASIC4.57□□□□□ -1.68
PCDHB1Q9Y5F3 AC108022.1-201ENST00000493466 478 ntBASIC4.57□□□□□ -1.68
PCDHB1Q9Y5F3 HMGB1P29-201ENST00000505659 499 ntBASIC4.57□□□□□ -1.68
PCDHB1Q9Y5F3 SLC25A15P5-201ENST00000508033 253 ntBASIC4.57□□□□□ -1.68
PCDHB1Q9Y5F3 HIGD1AP3-201ENST00000515857 278 ntBASIC4.57□□□□□ -1.68
PCDHB1Q9Y5F3 RN7SKP116-201ENST00000516902 319 ntBASIC4.57□□□□□ -1.68
PCDHB1Q9Y5F3 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC4.57□□□□□ -1.68
PCDHB1Q9Y5F3 AP001781.1-201ENST00000530977 207 ntBASIC4.57□□□□□ -1.68
PCDHB1Q9Y5F3 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC4.57□□□□□ -1.68
PCDHB1Q9Y5F3 AP005205.1-201ENST00000563503 508 ntBASIC4.57□□□□□ -1.68
PCDHB1Q9Y5F3 HNRNPCP4-201ENST00000571636 900 ntBASIC4.57□□□□□ -1.68
PCDHB1Q9Y5F3 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC4.57□□□□□ -1.68
PCDHB1Q9Y5F3 AC069061.3-201ENST00000582254 823 ntBASIC4.57□□□□□ -1.68
PCDHB1Q9Y5F3 AC091178.1-203ENST00000584586 279 ntBASIC4.57□□□□□ -1.68
PCDHB1Q9Y5F3 AP003117.2-201ENST00000606010 545 ntBASIC4.57□□□□□ -1.68
PCDHB1Q9Y5F3 AL357078.3-201ENST00000607528 618 ntBASIC4.57□□□□□ -1.68
PCDHB1Q9Y5F3 AL161734.1-201ENST00000609720 557 ntBASIC4.57□□□□□ -1.68
PCDHB1Q9Y5F3 AC090970.3-201ENST00000612566 866 ntBASIC4.57□□□□□ -1.68
PCDHB1Q9Y5F3 AC140113.4-201ENST00000622087 222 ntBASIC4.57□□□□□ -1.68
PCDHB1Q9Y5F3 AC068880.5-201ENST00000624331 290 ntBASIC4.57□□□□□ -1.68
PCDHB1Q9Y5F3 AC091925.2-201ENST00000625059 256 ntBASIC4.57□□□□□ -1.68
PCDHB1Q9Y5F3 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
PCDHB1Q9Y5F3 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
PCDHB1Q9Y5F3 AC011460.1-201ENST00000636268 1834 ntBASIC4.57□□□□□ -1.68
PCDHB1Q9Y5F3 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.57□□□□□ -1.68
PCDHB1Q9Y5F3 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.57□□□□□ -1.68
PCDHB1Q9Y5F3 AC009902.3-201ENST00000606235 2172 ntBASIC4.57□□□□□ -1.68
PCDHB1Q9Y5F3 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
PCDHB1Q9Y5F3 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.57□□□□□ -1.68
PCDHB1Q9Y5F3 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
PCDHB1Q9Y5F3 MTCO1P24-201ENST00000515438 1558 ntBASIC4.57□□□□□ -1.68
PCDHB1Q9Y5F3 AC108467.2-201ENST00000617640 1597 ntBASIC4.57□□□□□ -1.68
PCDHB1Q9Y5F3 CARF-203ENST00000414439 2099 ntTSL 2 BASIC4.57□□□□□ -1.68
PCDHB1Q9Y5F3 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
PCDHB1Q9Y5F3 OR56B2P-202ENST00000641377 2453 ntBASIC4.56□□□□□ -1.68
PCDHB1Q9Y5F3 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
PCDHB1Q9Y5F3 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
PCDHB1Q9Y5F3 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
PCDHB1Q9Y5F3 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
PCDHB1Q9Y5F3 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
PCDHB1Q9Y5F3 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.56□□□□□ -1.68
PCDHB1Q9Y5F3 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC4.56□□□□□ -1.68
PCDHB1Q9Y5F3 Y_RNA.248-201ENST00000364501 109 ntBASIC4.56□□□□□ -1.68
PCDHB1Q9Y5F3 RNA5SP509-201ENST00000364577 119 ntBASIC4.56□□□□□ -1.68
PCDHB1Q9Y5F3 RNU5E-4P-201ENST00000364931 120 ntBASIC4.56□□□□□ -1.68
PCDHB1Q9Y5F3 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC4.56□□□□□ -1.68
PCDHB1Q9Y5F3 RNU6-761P-201ENST00000384148 107 ntBASIC4.56□□□□□ -1.68
PCDHB1Q9Y5F3 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC4.56□□□□□ -1.68
PCDHB1Q9Y5F3 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC4.56□□□□□ -1.68
PCDHB1Q9Y5F3 DPPA2P1-201ENST00000428060 556 ntBASIC4.56□□□□□ -1.68
PCDHB1Q9Y5F3 ELOCP18-201ENST00000434209 337 ntBASIC4.56□□□□□ -1.68
PCDHB1Q9Y5F3 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC4.56□□□□□ -1.68
PCDHB1Q9Y5F3 AC114495.1-201ENST00000441274 436 ntBASIC4.56□□□□□ -1.68
PCDHB1Q9Y5F3 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
PCDHB1Q9Y5F3 AL136380.1-201ENST00000447970 162 ntBASIC4.56□□□□□ -1.68
PCDHB1Q9Y5F3 RPL29P29-201ENST00000448725 423 ntBASIC4.56□□□□□ -1.68
PCDHB1Q9Y5F3 FGF7P6-202ENST00000451282 293 ntBASIC4.56□□□□□ -1.68
PCDHB1Q9Y5F3 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC4.56□□□□□ -1.68
PCDHB1Q9Y5F3 HCG17-214ENST00000453558 732 ntTSL 5 BASIC4.56□□□□□ -1.68
PCDHB1Q9Y5F3 MTND1P9-201ENST00000453775 944 ntBASIC4.56□□□□□ -1.68
PCDHB1Q9Y5F3 SCARNA10-201ENST00000459255 330 ntBASIC4.56□□□□□ -1.68
PCDHB1Q9Y5F3 ST13P14-201ENST00000474095 734 ntBASIC4.56□□□□□ -1.68
PCDHB1Q9Y5F3 RBM43P1-201ENST00000476891 1081 ntBASIC4.56□□□□□ -1.68
PCDHB1Q9Y5F3 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC4.56□□□□□ -1.68
PCDHB1Q9Y5F3 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC4.56□□□□□ -1.68
PCDHB1Q9Y5F3 IGHVIII-2-1-201ENST00000518843 291 ntBASIC4.56□□□□□ -1.68
PCDHB1Q9Y5F3 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC4.56□□□□□ -1.68
PCDHB1Q9Y5F3 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC4.56□□□□□ -1.68
PCDHB1Q9Y5F3 AP003181.2-201ENST00000528941 181 ntBASIC4.56□□□□□ -1.68
PCDHB1Q9Y5F3 AP003385.6-201ENST00000531603 374 ntBASIC4.56□□□□□ -1.68
PCDHB1Q9Y5F3 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC4.56□□□□□ -1.68
PCDHB1Q9Y5F3 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC4.56□□□□□ -1.68
PCDHB1Q9Y5F3 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC4.56□□□□□ -1.68
PCDHB1Q9Y5F3 AC084783.1-201ENST00000565846 910 ntBASIC4.56□□□□□ -1.68
PCDHB1Q9Y5F3 AC068790.3-201ENST00000602988 553 ntBASIC4.56□□□□□ -1.68
PCDHB1Q9Y5F3 AL365503.1-201ENST00000605247 905 ntBASIC4.56□□□□□ -1.68
PCDHB1Q9Y5F3 AC006329.2-201ENST00000611491 394 ntBASIC4.56□□□□□ -1.68
PCDHB1Q9Y5F3 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.56□□□□□ -1.68
PCDHB1Q9Y5F3 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
PCDHB1Q9Y5F3 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
PCDHB1Q9Y5F3 AL391684.1-202ENST00000641293 1636 ntBASIC4.56□□□□□ -1.68
PCDHB1Q9Y5F3 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
PCDHB1Q9Y5F3 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
PCDHB1Q9Y5F3 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
PCDHB1Q9Y5F3 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
PCDHB1Q9Y5F3 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 115.1 ms