Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 AC008669.1-201ENST00000565823 2178 ntBASIC5.87□□□□□ -1.47
PCDHB11Q9Y5F2 MTOR-202ENST00000376838 4017 ntTSL 2 BASIC5.87□□□□□ -1.47
PCDHB11Q9Y5F2 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC5.87□□□□□ -1.47
PCDHB11Q9Y5F2 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC5.87□□□□□ -1.47
PCDHB11Q9Y5F2 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
PCDHB11Q9Y5F2 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
PCDHB11Q9Y5F2 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
PCDHB11Q9Y5F2 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
PCDHB11Q9Y5F2 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
PCDHB11Q9Y5F2 GPN1-205ENST00000458167 1618 ntTSL 2 BASIC5.86□□□□□ -1.47
PCDHB11Q9Y5F2 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
PCDHB11Q9Y5F2 RNA5SP273-201ENST00000362484 113 ntBASIC5.86□□□□□ -1.47
PCDHB11Q9Y5F2 SNORA20.1-201ENST00000364790 130 ntBASIC5.86□□□□□ -1.47
PCDHB11Q9Y5F2 Y_RNA.562-201ENST00000384695 113 ntBASIC5.86□□□□□ -1.47
PCDHB11Q9Y5F2 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC5.86□□□□□ -1.47
PCDHB11Q9Y5F2 RBMY1KP-201ENST00000423480 476 ntBASIC5.86□□□□□ -1.47
PCDHB11Q9Y5F2 GAPDHP48-201ENST00000436626 961 ntBASIC5.86□□□□□ -1.47
PCDHB11Q9Y5F2 RPL36AP39-201ENST00000445859 318 ntBASIC5.86□□□□□ -1.47
PCDHB11Q9Y5F2 AC008264.1-201ENST00000447612 367 ntBASIC5.86□□□□□ -1.47
PCDHB11Q9Y5F2 FTH1P25-201ENST00000447665 469 ntBASIC5.86□□□□□ -1.47
PCDHB11Q9Y5F2 CHEK2P4-201ENST00000450340 246 ntBASIC5.86□□□□□ -1.47
PCDHB11Q9Y5F2 AL445665.1-202ENST00000452436 324 ntBASIC5.86□□□□□ -1.47
PCDHB11Q9Y5F2 RN7SL273P-201ENST00000481561 299 ntBASIC5.86□□□□□ -1.47
PCDHB11Q9Y5F2 AC011005.2-201ENST00000487324 359 ntBASIC5.86□□□□□ -1.47
PCDHB11Q9Y5F2 RPL23AP40-201ENST00000487630 390 ntBASIC5.86□□□□□ -1.47
PCDHB11Q9Y5F2 RPL17P19-201ENST00000489069 552 ntBASIC5.86□□□□□ -1.47
PCDHB11Q9Y5F2 AC083795.1-201ENST00000491760 320 ntBASIC5.86□□□□□ -1.47
PCDHB11Q9Y5F2 AC022447.4-201ENST00000504053 364 ntBASIC5.86□□□□□ -1.47
PCDHB11Q9Y5F2 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC5.86□□□□□ -1.47
PCDHB11Q9Y5F2 AC027308.1-201ENST00000517993 110 ntBASIC5.86□□□□□ -1.47
PCDHB11Q9Y5F2 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC5.86□□□□□ -1.47
PCDHB11Q9Y5F2 AC103783.1-201ENST00000520506 373 ntBASIC5.86□□□□□ -1.47
PCDHB11Q9Y5F2 AP006587.4-201ENST00000526053 529 ntBASIC5.86□□□□□ -1.47
PCDHB11Q9Y5F2 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC5.86□□□□□ -1.47
PCDHB11Q9Y5F2 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC5.86□□□□□ -1.47
PCDHB11Q9Y5F2 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC5.86□□□□□ -1.47
PCDHB11Q9Y5F2 AL031176.1-201ENST00000604554 466 ntBASIC5.86□□□□□ -1.47
PCDHB11Q9Y5F2 AC012603.1-201ENST00000606424 528 ntBASIC5.86□□□□□ -1.47
PCDHB11Q9Y5F2 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
PCDHB11Q9Y5F2 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
PCDHB11Q9Y5F2 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
PCDHB11Q9Y5F2 AP000756.2-201ENST00000624168 2567 ntBASIC5.86□□□□□ -1.47
PCDHB11Q9Y5F2 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC5.86□□□□□ -1.47
PCDHB11Q9Y5F2 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
PCDHB11Q9Y5F2 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
PCDHB11Q9Y5F2 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
PCDHB11Q9Y5F2 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC5.85□□□□□ -1.47
PCDHB11Q9Y5F2 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
PCDHB11Q9Y5F2 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
PCDHB11Q9Y5F2 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC5.85□□□□□ -1.47
PCDHB11Q9Y5F2 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
PCDHB11Q9Y5F2 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC5.85□□□□□ -1.47
PCDHB11Q9Y5F2 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
PCDHB11Q9Y5F2 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
PCDHB11Q9Y5F2 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
PCDHB11Q9Y5F2 OR56A5-201ENST00000340110 738 ntBASIC5.85□□□□□ -1.47
PCDHB11Q9Y5F2 RNU1-35P-201ENST00000362782 153 ntBASIC5.85□□□□□ -1.47
PCDHB11Q9Y5F2 RNA5SP242-201ENST00000364171 118 ntBASIC5.85□□□□□ -1.47
PCDHB11Q9Y5F2 Y_RNA.214-201ENST00000364201 112 ntBASIC5.85□□□□□ -1.47
PCDHB11Q9Y5F2 Y_RNA.376-201ENST00000365638 108 ntBASIC5.85□□□□□ -1.47
PCDHB11Q9Y5F2 Y_RNA.577-201ENST00000384794 101 ntBASIC5.85□□□□□ -1.47
PCDHB11Q9Y5F2 RPS3AP2-201ENST00000407190 754 ntBASIC5.85□□□□□ -1.47
PCDHB11Q9Y5F2 RNU6ATAC16P-201ENST00000408591 138 ntBASIC5.85□□□□□ -1.47
PCDHB11Q9Y5F2 RNU6-603P-201ENST00000411403 107 ntBASIC5.85□□□□□ -1.47
PCDHB11Q9Y5F2 EEF1A1P29-201ENST00000416082 1096 ntBASIC5.85□□□□□ -1.47
PCDHB11Q9Y5F2 AC108032.1-201ENST00000416706 207 ntBASIC5.85□□□□□ -1.47
PCDHB11Q9Y5F2 RPL7P2-201ENST00000427639 268 ntBASIC5.85□□□□□ -1.47
PCDHB11Q9Y5F2 AC133473.1-201ENST00000455173 299 ntBASIC5.85□□□□□ -1.47
PCDHB11Q9Y5F2 RNU7-138P-201ENST00000459479 64 ntBASIC5.85□□□□□ -1.47
PCDHB11Q9Y5F2 FTH1P2-201ENST00000466086 412 ntBASIC5.85□□□□□ -1.47
PCDHB11Q9Y5F2 AC083829.1-201ENST00000503756 657 ntBASIC5.85□□□□□ -1.47
PCDHB11Q9Y5F2 NDUFB5P1-201ENST00000508134 564 ntBASIC5.85□□□□□ -1.47
PCDHB11Q9Y5F2 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC5.85□□□□□ -1.47
PCDHB11Q9Y5F2 AC090151.1-201ENST00000520784 730 ntBASIC5.85□□□□□ -1.47
PCDHB11Q9Y5F2 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC5.85□□□□□ -1.47
PCDHB11Q9Y5F2 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
PCDHB11Q9Y5F2 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC5.85□□□□□ -1.47
PCDHB11Q9Y5F2 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC5.85□□□□□ -1.47
PCDHB11Q9Y5F2 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC5.85□□□□□ -1.47
PCDHB11Q9Y5F2 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC5.85□□□□□ -1.47
PCDHB11Q9Y5F2 AC051619.2-201ENST00000559063 397 ntBASIC5.85□□□□□ -1.47
PCDHB11Q9Y5F2 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
PCDHB11Q9Y5F2 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
PCDHB11Q9Y5F2 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
PCDHB11Q9Y5F2 AC000374.1-201ENST00000434698 1745 ntBASIC5.85□□□□□ -1.47
PCDHB11Q9Y5F2 AC009404.1-201ENST00000420330 3090 ntTSL 3 BASIC5.85□□□□□ -1.47
PCDHB11Q9Y5F2 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
PCDHB11Q9Y5F2 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
PCDHB11Q9Y5F2 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC5.85□□□□□ -1.47
PCDHB11Q9Y5F2 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC5.85□□□□□ -1.47
PCDHB11Q9Y5F2 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
PCDHB11Q9Y5F2 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
PCDHB11Q9Y5F2 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC5.84□□□□□ -1.47
PCDHB11Q9Y5F2 AC022164.1-201ENST00000568767 2673 ntBASIC5.84□□□□□ -1.47
PCDHB11Q9Y5F2 AC027287.1-201ENST00000553115 1453 ntBASIC5.84□□□□□ -1.47
PCDHB11Q9Y5F2 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
PCDHB11Q9Y5F2 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
PCDHB11Q9Y5F2 AC138393.1-203ENST00000327086 343 ntBASIC5.84□□□□□ -1.47
PCDHB11Q9Y5F2 OR10R3P-201ENST00000361688 942 ntBASIC5.84□□□□□ -1.47
PCDHB11Q9Y5F2 Y_RNA.151-201ENST00000363566 112 ntBASIC5.84□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 84.7 ms