Protein–RNA interactions for Protein: Q9Y252

RNF6, E3 ubiquitin-protein ligase RNF6, humanhuman

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF6Q9Y252 ESD-201ENST00000378697 1079 ntTSL 5 BASIC3.25□□□□□ -1.89
RNF6Q9Y252 ARF4P3-201ENST00000397387 509 ntBASIC3.25□□□□□ -1.89
RNF6Q9Y252 SNRPEP2-201ENST00000397592 279 ntBASIC3.25□□□□□ -1.89
RNF6Q9Y252 RNA5SP129-201ENST00000410276 118 ntBASIC3.25□□□□□ -1.89
RNF6Q9Y252 RNU2-42P-201ENST00000410697 113 ntBASIC3.25□□□□□ -1.89
RNF6Q9Y252 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC3.25□□□□□ -1.89
RNF6Q9Y252 OR4K6P-201ENST00000416478 897 ntBASIC3.25□□□□□ -1.89
RNF6Q9Y252 BX842559.1-201ENST00000419615 532 ntBASIC3.25□□□□□ -1.89
RNF6Q9Y252 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.25□□□□□ -1.89
RNF6Q9Y252 AC245054.1-201ENST00000420944 258 ntBASIC3.25□□□□□ -1.89
RNF6Q9Y252 GTF2IP23-201ENST00000423746 351 ntBASIC3.25□□□□□ -1.89
RNF6Q9Y252 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.25□□□□□ -1.89
RNF6Q9Y252 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC3.25□□□□□ -1.89
RNF6Q9Y252 AC012497.1-201ENST00000429392 575 ntBASIC3.25□□□□□ -1.89
RNF6Q9Y252 GTF2IP3-201ENST00000433887 494 ntBASIC3.25□□□□□ -1.89
RNF6Q9Y252 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC3.25□□□□□ -1.89
RNF6Q9Y252 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.25□□□□□ -1.89
RNF6Q9Y252 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC3.25□□□□□ -1.89
RNF6Q9Y252 AC010655.1-201ENST00000449336 292 ntBASIC3.25□□□□□ -1.89
RNF6Q9Y252 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC3.25□□□□□ -1.89
RNF6Q9Y252 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC3.25□□□□□ -1.89
RNF6Q9Y252 MTND2P39-201ENST00000457230 764 ntBASIC3.25□□□□□ -1.89
RNF6Q9Y252 AC021205.2-201ENST00000480069 347 ntBASIC3.25□□□□□ -1.89
RNF6Q9Y252 AC010460.2-201ENST00000509054 677 ntBASIC3.25□□□□□ -1.89
RNF6Q9Y252 PHBP14-201ENST00000512887 367 ntBASIC3.25□□□□□ -1.89
RNF6Q9Y252 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC3.25□□□□□ -1.89
RNF6Q9Y252 RANP9-201ENST00000519957 271 ntBASIC3.25□□□□□ -1.89
RNF6Q9Y252 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.25□□□□□ -1.89
RNF6Q9Y252 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.25□□□□□ -1.89
RNF6Q9Y252 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC3.25□□□□□ -1.89
RNF6Q9Y252 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC3.25□□□□□ -1.89
RNF6Q9Y252 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC3.25□□□□□ -1.89
RNF6Q9Y252 NACA-211ENST00000548563 827 ntTSL 5 BASIC3.25□□□□□ -1.89
RNF6Q9Y252 SYF2P1-201ENST00000550658 413 ntBASIC3.25□□□□□ -1.89
RNF6Q9Y252 AC087481.2-201ENST00000565492 330 ntBASIC3.25□□□□□ -1.89
RNF6Q9Y252 LARP7P2-201ENST00000575306 125 ntBASIC3.25□□□□□ -1.89
RNF6Q9Y252 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC3.25□□□□□ -1.89
RNF6Q9Y252 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC3.25□□□□□ -1.89
RNF6Q9Y252 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC3.25□□□□□ -1.89
RNF6Q9Y252 AF129408.1-201ENST00000608767 431 ntBASIC3.25□□□□□ -1.89
RNF6Q9Y252 AP001521.1-201ENST00000609150 300 ntBASIC3.25□□□□□ -1.89
RNF6Q9Y252 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC3.25□□□□□ -1.89
RNF6Q9Y252 AP001002.2-201ENST00000625137 386 ntBASIC3.25□□□□□ -1.89
RNF6Q9Y252 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC3.25□□□□□ -1.89
RNF6Q9Y252 CYP3A51P-201ENST00000633513 256 ntBASIC3.25□□□□□ -1.89
RNF6Q9Y252 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC3.25□□□□□ -1.89
RNF6Q9Y252 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC3.25□□□□□ -1.89
RNF6Q9Y252 AP005901.5-201ENST00000545779 1796 ntBASIC3.25□□□□□ -1.89
RNF6Q9Y252 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.25□□□□□ -1.89
RNF6Q9Y252 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.25□□□□□ -1.89
RNF6Q9Y252 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
RNF6Q9Y252 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
RNF6Q9Y252 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
RNF6Q9Y252 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
RNF6Q9Y252 OTUD4P1-201ENST00000237841 3067 ntBASIC3.24□□□□□ -1.89
RNF6Q9Y252 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
RNF6Q9Y252 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
RNF6Q9Y252 Y_RNA.25-201ENST00000362528 102 ntBASIC3.24□□□□□ -1.89
RNF6Q9Y252 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC3.24□□□□□ -1.89
RNF6Q9Y252 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
RNF6Q9Y252 RNU6-712P-201ENST00000410558 100 ntBASIC3.24□□□□□ -1.89
RNF6Q9Y252 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
RNF6Q9Y252 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC3.24□□□□□ -1.89
RNF6Q9Y252 HMGB1P12-201ENST00000438594 598 ntBASIC3.24□□□□□ -1.89
RNF6Q9Y252 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.24□□□□□ -1.89
RNF6Q9Y252 AL357552.1-201ENST00000445254 415 ntBASIC3.24□□□□□ -1.89
RNF6Q9Y252 AC112492.1-201ENST00000449607 712 ntBASIC3.24□□□□□ -1.89
RNF6Q9Y252 RPS24P6-201ENST00000452670 400 ntBASIC3.24□□□□□ -1.89
RNF6Q9Y252 BX510359.1-201ENST00000456973 237 ntBASIC3.24□□□□□ -1.89
RNF6Q9Y252 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC3.24□□□□□ -1.89
RNF6Q9Y252 HMGN1P18-201ENST00000457642 277 ntBASIC3.24□□□□□ -1.89
RNF6Q9Y252 RPL21P10-201ENST00000463521 490 ntBASIC3.24□□□□□ -1.89
RNF6Q9Y252 RN7SL601P-201ENST00000471221 293 ntBASIC3.24□□□□□ -1.89
RNF6Q9Y252 AC006390.1-201ENST00000508068 283 ntBASIC3.24□□□□□ -1.89
RNF6Q9Y252 AC026412.2-201ENST00000512270 1075 ntBASIC3.24□□□□□ -1.89
RNF6Q9Y252 MTCO2P32-201ENST00000514865 403 ntBASIC3.24□□□□□ -1.89
RNF6Q9Y252 RNU6-27P-201ENST00000516146 107 ntBASIC3.24□□□□□ -1.89
RNF6Q9Y252 SCARNA13-201ENST00000516672 275 ntBASIC3.24□□□□□ -1.89
RNF6Q9Y252 AC093331.1-201ENST00000521474 169 ntBASIC3.24□□□□□ -1.89
RNF6Q9Y252 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.24□□□□□ -1.89
RNF6Q9Y252 AC103843.2-201ENST00000530523 682 ntBASIC3.24□□□□□ -1.89
RNF6Q9Y252 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC3.24□□□□□ -1.89
RNF6Q9Y252 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC3.24□□□□□ -1.89
RNF6Q9Y252 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC3.24□□□□□ -1.89
RNF6Q9Y252 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC3.24□□□□□ -1.89
RNF6Q9Y252 AF131215.7-201ENST00000602443 707 ntBASIC3.24□□□□□ -1.89
RNF6Q9Y252 AL355365.1-201ENST00000616480 294 ntBASIC3.24□□□□□ -1.89
RNF6Q9Y252 AL109620.1-201ENST00000618738 1197 ntBASIC3.24□□□□□ -1.89
RNF6Q9Y252 AC084824.4-201ENST00000620106 731 ntBASIC3.24□□□□□ -1.89
RNF6Q9Y252 AC110801.1-201ENST00000623590 212 ntBASIC3.24□□□□□ -1.89
RNF6Q9Y252 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
RNF6Q9Y252 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
RNF6Q9Y252 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.24□□□□□ -1.89
RNF6Q9Y252 ZNF826P-207ENST00000622273 1910 ntBASIC3.24□□□□□ -1.89
RNF6Q9Y252 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC3.24□□□□□ -1.89
RNF6Q9Y252 AC007256.1-201ENST00000392253 2765 ntBASIC3.23□□□□□ -1.89
RNF6Q9Y252 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.23□□□□□ -1.89
RNF6Q9Y252 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.23□□□□□ -1.89
RNF6Q9Y252 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.23□□□□□ -1.89
RNF6Q9Y252 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 103.6 ms